>rna
gcuaaaccuagccccaaacccacuccaccuuacuaccagcaaccuuagccaaaccauuuacauaaaguauaggcgauaga
aauuguggcgcaauagauauaguaccgcaagggaaagaugaaaaauuauaaccaagcauaauauagcaaggacuaacccc
uauaccuucugcauaaugaauuaacuagaaauaacuuugcaaggagagccaaagcuaagacccccgaaaccagacgagcu
accuaagaacagcuaagagcacacccgucuauguagcaaaauagugggaagauuuauagguagaggcgacaaaccuaccg
agccuggugauagcugguuguccaagauagaaucuuaguucaacuuuaaauuugcccacagaaccaaauccccuuguaaa
uuuaacuguuaguccaaagaggaacagcucuuuggacacuaggaaaaaaccuuguagagagaguaaaaaauuuaacaccc
auaguaggccuaaaagcagccaccaauuaagaaagcguucaagcucaacacccacuaccuaaaaaaucccaaacauauaa
cugaacuccucacacccaauuggaccaaucuaucacccuauagaagaacuaauguuaguauaaguaacaugaaaacauuc
uccuccgcauaagccugcgucagaucacacugacaauuaacagcccaauaucuacaaucaaccaacaagucauuauuacc
cucacugucaacccaacacaggcaugcucauaaggaaagguuaaaaaaaguaaaaggaacucggcaaaucuuaccccgcc
uguuuaccaaaaacaucaccucuagcaucaccaguauuagaggcaccgccugcccagugacacauguuuaacggccgcgg
uacccuaaccgugcaaagguagcauaaucacuuguuccuuaaauagggaccuguaugaauggcuccacgaggguucagcu
gucucuuacuuuuaaccagugaaauugaccugcccgugaagaggcgggcauaacacagcaagacgagaagacccuaugga
gcuuuaauuuauuaaugcaaacaguaaccugcauuaaaaauuucgguuggggcgaccucggagcagaacccaaccuccga
gcaguacaugcuaagacuucaccagucaaagcgaaccucaauugauccaauaacuugaccaacggaacaaguuacccuag
ggauaacagcgcaauccuauucuagaguccauaucaacaauaggguuuacgaccucgauguuggaucaggacaucccgau
ggugcagccgcuauuaaagguucguuuguucaacgauuaaaguccuacgugaucugaguucagaccggaguaauccaggu
cgguuucuaucuacuuuauuccucccuguacgaaaggacaagagaaauaaggccuacuucacaaagcgccuucccccgua
aaugauaucaucucaacuuagauacccacacccaagaacaggguu

The query sequence (length=1485) is searched through a non-redundant set of database sequences rna_nr.fasta.gz clustered at 100% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	7a5i:A3	1485	1485	1.0000	1.0000	1.0000	0.0
2	8k2a:L1	1500	1500	1.0000	0.9900	0.9900	0.0	8k2b:L1, 8xt0:L1, 8xt1:L1, 8xt2:L1, 8xt3:L1
3	3j7y:A	1472	1485	0.9912	1.0000	0.9912	0.0	3j9m:A, 6nu2:A, 6nu3:A
4	7oid:A	1472	1488	0.9892	0.9980	0.9872	0.0	7oie:A
5	7og4:XA	1498	1508	0.9926	0.9840	0.9775	0.0
6	6zsa:XA	1499	1509	0.9926	0.9833	0.9768	0.0	6zsb:XA, 6zsd:XA, 6zse:XA, 6zsg:XA
7	7a5h:A	1457	1485	0.9811	1.0000	0.9811	0.0
8	6zsc:XA	1500	1510	0.9926	0.9827	0.9762	0.0
9	6zs9:XA	1501	1511	0.9926	0.9820	0.9755	0.0
10	7l08:A	1527	1526	1.0000	0.9725	0.9731	0.0	7l20:A, 6vlz:A, 6vmi:A
11	6i9r:A	1501	1511	0.9926	0.9820	0.9755	0.0
12	6zm6:A	1531	1528	0.9987	0.9686	0.9705	0.0
13	6zm5:A	1534	1531	1.0000	0.9681	0.9700	0.0
14	5ool:A	1441	1485	0.9704	1.0000	0.9704	0.0
15	7of4:A	1463	1498	0.9764	0.9911	0.9680	0.0	7of6:A
16	7pd3:A	1280	1310	0.8593	0.9969	0.9740	0.0
17	7a5f:A3	1503	1070	0.7111	0.7026	0.9869	0.0	7a5g:A3, 7a5k:A3
18	7a5f:A3	1503	420	0.2828	0.2794	1.0000	0.0	7a5g:A3, 7a5k:A3
19	8any:A	1558	1091	0.7192	0.6855	0.9789	0.0	8oir:B8, 8oit:B8, 7qi4:A, 7qi5:A, 7qi6:A
20	8any:A	1558	438	0.2828	0.2696	0.9589	0.0	8oir:B8, 8oit:B8, 7qi4:A, 7qi5:A, 7qi6:A
21	7a5j:A	1492	1070	0.7037	0.7004	0.9766	0.0
22	7a5j:A	1492	420	0.2828	0.2815	1.0000	0.0
23	7o9m:A	1454	888	0.5764	0.5887	0.9640	0.0
24	7o9m:A	1454	591	0.3872	0.3955	0.9729	0.0
25	7odt:A	1453	877	0.5684	0.5809	0.9624	0.0
26	7odt:A	1453	588	0.3879	0.3964	0.9796	0.0
27	7ods:A	1445	877	0.5684	0.5841	0.9624	0.0
28	7ods:A	1445	554	0.3623	0.3723	0.9711	0.0
29	7odr:A	1448	877	0.5684	0.5829	0.9624	0.0
30	7odr:A	1448	555	0.3630	0.3722	0.9712	0.0
31	7oic:A	1383	859	0.5582	0.5994	0.9651	0.0
32	7oic:A	1383	546	0.3677	0.3948	1.0000	0.0
33	8qsj:A	1418	869	0.5630	0.5896	0.9620	0.0
34	8qsj:A	1418	550	0.3535	0.3702	0.9545	0.0
35	7o9k:A	1436	882	0.5690	0.5884	0.9580	0.0
36	7o9k:A	1436	590	0.3872	0.4004	0.9746	0.0
37	7of2:A	1410	859	0.5576	0.5872	0.9639	0.0
38	7of2:A	1410	583	0.3838	0.4043	0.9777	0.0
39	7of5:A	1389	855	0.5535	0.5918	0.9614	0.0
40	7of5:A	1389	554	0.3657	0.3909	0.9801	0.0
41	8pk0:A	1423	877	0.5630	0.5875	0.9532	0.0
42	8pk0:A	1423	554	0.3522	0.3675	0.9440	0.0
43	7of3:A	1386	862	0.5556	0.5952	0.9571	0.0
44	7of3:A	1386	554	0.3569	0.3824	0.9567	0.0
45	7of0:A	1376	862	0.5508	0.5945	0.9490	0.0
46	7of0:A	1376	554	0.3549	0.3830	0.9513	0.0
47	7of7:A	1376	855	0.5468	0.5901	0.9497	0.0
48	7of7:A	1376	554	0.3636	0.3924	0.9747	0.0
49	7po4:A	1145	864	0.5313	0.6891	0.9132	0.0
50	7po4:A	1145	131	0.0835	0.1083	0.9466	2.38e-50
51	7po4:A	1145	130	0.0788	0.1022	0.9000	4.04e-38
52	7po4:A	1145	82	0.0505	0.0655	0.9146	4.13e-23
53	5aj4:BA	1515	1411	0.7630	0.7479	0.8030	0.0	4v19:A
54	7nqh:BA	1544	1424	0.7657	0.7364	0.7985	0.0	7nql:BA, 7nsh:BA, 7nsi:BA, 7nsj:BA, 6ydp:BA, 6ydw:BA
55	6gaw:BA	1549	1428	0.7670	0.7353	0.7976	0.0	6gb2:BA
56	7oi8:A	1092	490	0.3178	0.4322	0.9633	0.0	7oi9:A, 7oia:A, 7oib:A, 5oom:A
57	7oi8:A	1092	252	0.1623	0.2207	0.9563	7.87e-110	7oi9:A, 7oia:A, 7oib:A, 5oom:A
58	7oi8:A	1092	247	0.1596	0.2170	0.9595	2.83e-109	7oi9:A, 7oia:A, 7oib:A, 5oom:A
59	7oi8:A	1092	118	0.0754	0.1026	0.9492	2.40e-45	7oi9:A, 7oia:A, 7oib:A, 5oom:A
60	7oi8:A	1092	34	0.0229	0.0311	1.0000	2.52e-10	7oi9:A, 7oia:A, 7oib:A, 5oom:A
61	7oi7:A	1054	490	0.3178	0.4478	0.9633	0.0
62	7oi7:A	1054	252	0.1623	0.2287	0.9563	7.87e-110
63	7oi7:A	1054	118	0.0754	0.1063	0.9492	2.40e-45
64	7oi7:A	1054	129	0.0801	0.1129	0.9225	1.12e-43
65	7oi7:A	1054	81	0.0545	0.0769	1.0000	1.88e-36
66	7oi7:A	1054	34	0.0229	0.0323	1.0000	2.52e-10
67	7oi6:A	1208	490	0.3178	0.3907	0.9633	0.0
68	7oi6:A	1208	385	0.2377	0.2922	0.9169	3.49e-143
69	7oi6:A	1208	252	0.1623	0.1995	0.9563	7.87e-110
70	7oi6:A	1208	118	0.0754	0.0927	0.9492	2.40e-45
71	7oi6:A	1208	34	0.0229	0.0281	1.0000	2.52e-10
72	7qh7:A	1256	474	0.3044	0.3599	0.9536	0.0
73	7qh7:A	1256	553	0.3333	0.3941	0.8951	0.0
74	7qh7:A	1256	313	0.2020	0.2389	0.9585	7.55e-140
75	8qu5:A	1049	458	0.2963	0.4194	0.9607	0.0
76	8qu5:A	1049	247	0.1596	0.2259	0.9595	2.83e-109
77	8qu5:A	1049	239	0.1535	0.2173	0.9540	1.33e-102
78	8qu5:A	1049	118	0.0754	0.1068	0.9492	2.40e-45
79	8qu5:A	1049	34	0.0229	0.0324	1.0000	2.52e-10
80	4ce4:A	1444	914	0.5030	0.5173	0.8173	0.0
81	8qu1:A	938	459	0.2889	0.4574	0.9346	0.0
82	8qu1:A	938	176	0.1125	0.1780	0.9489	1.79e-71
83	8qu1:A	938	118	0.0754	0.1194	0.9492	2.40e-45
84	8qu1:A	938	126	0.0781	0.1237	0.9206	5.19e-42
85	8qu1:A	938	38	0.0256	0.0405	1.0000	1.51e-12
86	8qu1:A	938	34	0.0229	0.0362	1.0000	2.52e-10
87	8qu1:A	938	32	0.0215	0.0341	1.0000	3.26e-09
88	8oin:B8	1571	1040	0.5522	0.5220	0.7885	0.0	8oiq:B8
89	8oin:B8	1571	271	0.1657	0.1566	0.9077	2.87e-99	8oiq:B8
90	7qh6:A	1133	264	0.1751	0.2295	0.9848	2.13e-130
91	7qh6:A	1133	312	0.1973	0.2586	0.9391	1.28e-127
92	7qh6:A	1133	256	0.1650	0.2162	0.9570	4.70e-112
93	7qh6:A	1133	184	0.1239	0.1624	1.0000	1.04e-93
94	7qh6:A	1133	148	0.0976	0.1280	0.9797	1.39e-67

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