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BioLiP
>rna
caaggucauucgcaagaguggccuugcg

The query sequence (length=28) is searched through a non-redundant set of database sequences rna_nr.fasta.gz clustered at 100% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
Alignment
score
Homologs
to hit
1 2nuf:C 28 28 1.0000 1.0000 1.0000 56 2nuf:D
2 4m2z:C 27 27 0.9643 1.0000 1.0000 39 4m2z:D
3 2ez6:C 28 28 0.8571 0.8571 0.8571 36 2ez6:D, 7r97:C, 7r97:D
4 4m30:C 27 27 0.8571 0.8889 0.8889 24 4m30:D
5 6o5f:C 23 23 0.8214 1.0000 1.0000 15 8ssw:C
6 6o5f:D 24 24 0.8571 1.0000 1.0000 10
7 8ssw:D 23 23 0.8214 1.0000 1.0000 4
8 1aud:B 30 28 0.6071 0.5667 0.6071 -18
9 5jc7:X 24 24 0.5357 0.6250 0.6250 -24
10 6aax:B 28 28 0.4286 0.4286 0.4286 -24 6aax:D, 6ajk:B
11 7o80:AH 24 24 0.5357 0.6250 0.6250 -24
12 7rgu:B 28 27 0.6071 0.6071 0.6296 -26 7rgu:D, 7rgu:F, 7rgu:H
13 7jtq:B 31 28 0.5714 0.5161 0.5714 -27 7jtq:D
14 4v5z:BH 25 25 0.5000 0.5600 0.5600 -28
15 2ww9:F 25 25 0.5714 0.6400 0.6400 -29 2wwa:F, 2wwb:F
16 6xh1:D 27 27 0.4643 0.4815 0.4815 -31 6xh3:D
17 6bsg:R 25 25 0.4643 0.5200 0.5200 -33 6bsh:R
18 7f49:B 30 28 0.5000 0.4667 0.5000 -33
19 7jtn:B 30 28 0.5000 0.4667 0.5000 -33 7jtn:D
20 1ooa:C 29 28 0.4643 0.4483 0.4643 -34 1ooa:D
21 1ysh:A 28 28 0.3571 0.3571 0.3571 -34
22 3agv:U 24 24 0.4643 0.5417 0.5417 -34
23 9asi:T 29 28 0.4643 0.4483 0.4643 -34
24 6cmn:D 27 27 0.4286 0.4444 0.4444 -36 6xh0:D, 6xh2:D
25 2nue:C 46 28 1.0000 0.6087 1.0000 -38
26 6h9h:E 24 24 0.4286 0.5000 0.5000 -39
27 6ztm:AV 30 27 0.5714 0.5333 0.5926 -39
28 7adc:R 28 28 0.3214 0.3214 0.3214 -39 7add:R, 6z9r:R, 6z9s:R, 6z9t:R
29 1jbt:C 29 26 0.5714 0.5517 0.6154 -40 1jbt:D
30 5jc7:Y 24 23 0.5357 0.6250 0.6522 -40
31 8opp:D 25 25 0.5714 0.6400 0.6400 -40
32 5m0i:E 28 27 0.5000 0.5000 0.5185 -41 5m0i:F, 5m0j:E, 5m0j:F
33 6mur:G 27 27 0.3929 0.4074 0.4074 -41 6o7e:G, 6o7h:G
34 6zto:AV 27 27 0.3929 0.4074 0.4074 -41 6ztp:AV, 6zu1:AV
35 2f8t:C 26 26 0.3929 0.4231 0.4231 -42
36 7cxm:J 26 26 0.3929 0.4231 0.4231 -42 7cxn:J, 8gw1:J, 8gwk:J, 8gwm:J
37 8dvs:B 26 26 0.3929 0.4231 0.4231 -42
38 8p16:4 26 26 0.3929 0.4231 0.4231 -42 8p17:4, 8p18:4
39 4lgt:F 20 20 0.4286 0.6000 0.6000 -43
40 5k0y:F 30 28 0.4286 0.4000 0.4286 -43
41 6bsj:R 25 25 0.3929 0.4400 0.4400 -43
42 6t4q:5 30 28 0.4286 0.4000 0.4286 -43
43 6ztn:AV 31 28 0.5357 0.4839 0.5357 -43
44 7xpl:G 25 25 0.3929 0.4400 0.4400 -43
45 8ooy:T 26 26 0.3571 0.3846 0.3846 -43
46 1jbs:C 29 28 0.3929 0.3793 0.3929 -44 1jbs:D
47 1l1c:C 29 28 0.3929 0.3793 0.3929 -44
48 3a6p:E 24 24 0.3929 0.4583 0.4583 -44 3a6p:J
49 5y88:E 28 28 0.2857 0.2857 0.2857 -44
50 6du4:B 29 28 0.3929 0.3793 0.3929 -44
51 6snj:B 28 28 0.2857 0.2857 0.2857 -44 7zap:B
52 6t0w:V 25 24 0.5000 0.5600 0.5833 -44
53 7kx9:B 24 24 0.3929 0.4583 0.4583 -44
54 7n0c:T 25 25 0.4643 0.5200 0.5200 -44
55 2ply:C 23 23 0.3929 0.4783 0.4783 -45 2ply:E, 2uwm:C, 2uwm:D
56 7a5p:Y 29 27 0.5000 0.4828 0.5185 -45
57 2ann:B 23 22 0.5000 0.6087 0.6364 -46
58 3bo1:E 27 27 0.3571 0.3704 0.3704 -46
59 6kwr:B 28 27 0.4643 0.4643 0.4815 -46
60 6t0u:V 23 23 0.4643 0.5652 0.5652 -46
61 6v4x:Z 27 27 0.3571 0.3704 0.3704 -46
62 7abh:Z 28 27 0.4643 0.4643 0.4815 -46
63 7cyq:J 27 27 0.3571 0.3704 0.3704 -46 7eiz:J, 8gwb:J, 8gwe:J, 8gwf:J, 8gwg:J, 8gwi:J, 8gwn:J, 8gwo:J
64 8g7v:Y 23 23 0.4643 0.5652 0.5652 -46
65 1vfg:C 31 28 0.4286 0.3871 0.4286 -47
66 3j0l:g 31 28 0.4286 0.3871 0.4286 -47 3j0o:g, 3j0p:g, 3j0q:g
67 4k50:F 31 28 0.4286 0.3871 0.4286 -47
68 4x4u:B 31 28 0.4286 0.3871 0.4286 -47
69 6fec:F 26 26 0.3571 0.3846 0.3846 -47
70 6o7i:G 26 26 0.3571 0.3846 0.3846 -47
71 6zym:2 27 26 0.4643 0.4815 0.5000 -47
72 7qv1:A 26 26 0.3571 0.3846 0.3846 -47 7qv3:A
73 7w0f:F 26 26 0.3571 0.3846 0.3846 -47
74 8do6:J 26 26 0.3571 0.3846 0.3846 -47
75 8qk7:4 26 26 0.3571 0.3846 0.3846 -47
76 8rg0:7 31 28 0.4286 0.3871 0.4286 -47
77 8rw1:3 26 26 0.3571 0.3846 0.3846 -47 8s8d:3, 8s8e:3, 8s8f:3, 8s8g:3, 8s8h:3, 8s8i:3, 8s8j:3
78 1ekz:B 30 28 0.3929 0.3667 0.3929 -48
79 2anr:B 25 25 0.3571 0.4000 0.4000 -48
80 2b63:R 31 28 0.5000 0.4516 0.5000 -48
81 3hjy:D 25 25 0.3571 0.4000 0.4000 -48
82 4l8r:A 26 25 0.4643 0.5000 0.5200 -48 4qoz:A
83 4x4t:D 30 28 0.3929 0.3667 0.3929 -48
84 4z7k:C 25 25 0.3571 0.4000 0.4000 -48
85 6asx:R 21 21 0.4643 0.6190 0.6190 -48 6flq:R
86 6du5:B 25 25 0.3571 0.4000 0.4000 -48
87 6f4g:C 25 25 0.3571 0.4000 0.4000 -48 6f4g:F
88 6ifl:J 35 28 0.5357 0.4286 0.5357 -48 6ifr:J
89 6kl9:G 25 25 0.3571 0.4000 0.4000 -48 6klb:E, 6klb:G
90 6o1o:N 30 28 0.3929 0.3667 0.3929 -48
91 7s3h:R 30 28 0.3929 0.3667 0.3929 -48
92 7yfq:B 25 25 0.3571 0.4000 0.4000 -48
93 8dg7:F 26 26 0.4286 0.4615 0.4615 -48
94 8f5g:D 26 24 0.5000 0.5385 0.5833 -48 8f5g:E, 8f5g:F
95 8peg:V 30 28 0.3929 0.3667 0.3929 -48
96 8xc1:D 30 28 0.3929 0.3667 0.3929 -48 8xc1:F
97 1jid:B 29 28 0.3571 0.3448 0.3571 -49
98 2ab4:B 20 20 0.4643 0.6500 0.6500 -49
99 2om7:F 29 28 0.3571 0.3448 0.3571 -49
100 3deg:I 29 28 0.3571 0.3448 0.3571 -49
101 3siu:C 28 28 0.2500 0.2500 0.2500 -49 3siu:F
102 3sn2:B 29 28 0.3571 0.3448 0.3571 -49
103 4k4u:B 19 19 0.3929 0.5789 0.5789 -49 4k4u:F
104 4yzv:QX 20 20 0.4643 0.6500 0.6500 -49 4yzv:XX
105 5np6:A 29 28 0.3571 0.3448 0.3571 -49
106 5xlp:K 24 24 0.3571 0.4167 0.4167 -49
107 6h9i:C 25 25 0.4286 0.4800 0.4800 -49 6h9i:E
108 6omv:G 29 28 0.3571 0.3448 0.3571 -49
109 6t0r:V 20 20 0.4643 0.6500 0.6500 -49
110 6t2c:V 29 28 0.3571 0.3448 0.3571 -49
111 6v4x:Y 25 25 0.4286 0.4800 0.4800 -49
112 6xmg:E 24 24 0.3571 0.4167 0.4167 -49
113 6xzd:IN1 20 20 0.4643 0.6500 0.6500 -49
114 7dte:G 29 28 0.3571 0.3448 0.3571 -49
115 7ynb:C 28 28 0.2500 0.2500 0.2500 -49
116 8a3y:P 28 28 0.2500 0.2500 0.2500 -49
117 8g7t:X 24 24 0.3571 0.4167 0.4167 -49 8g7u:X
118 8sfi:B 28 28 0.2500 0.2500 0.2500 -49
119 8sfj:B 29 28 0.3571 0.3448 0.3571 -49
120 8upo:7 28 28 0.2500 0.2500 0.2500 -49
121 9bct:7 29 28 0.3571 0.3448 0.3571 -49
122 2ese:B 23 23 0.3571 0.4348 0.4348 -50
123 3ts0:U 23 23 0.3571 0.4348 0.4348 -50 3ts0:V, 5udz:W
124 4oog:D 34 28 0.5714 0.4706 0.5714 -50
125 6tph:B 23 23 0.3571 0.4348 0.4348 -50
126 6ztl:AV 34 28 0.5714 0.4706 0.5714 -50
127 8e8m:R 33 28 0.4643 0.3939 0.4643 -50
128 8g7v:X 23 23 0.3571 0.4348 0.4348 -50
129 8qz8:V 33 28 0.4643 0.3939 0.4643 -50
130 1ze2:C 22 22 0.3571 0.4545 0.4545 -51 1ze2:D
131 2n82:A 23 23 0.4286 0.5217 0.5217 -51
132 2pjp:B 23 23 0.4286 0.5217 0.5217 -51
133 3ola:B 17 17 0.3929 0.6471 0.6471 -51 3ola:F
134 4k4z:B 17 17 0.3929 0.6471 0.6471 -51 4k4z:N
135 5lm7:G 27 27 0.3214 0.3333 0.3333 -51
136 5ns3:D 32 28 0.4286 0.3750 0.4286 -51
137 6d06:B 23 23 0.4286 0.5217 0.5217 -51 5ed2:B, 5ed2:E, 7kfn:B
138 6ifu:J 28 27 0.4286 0.4286 0.4444 -51 6ify:J, 6ifz:J
139 6ozo:C 23 23 0.4286 0.5217 0.5217 -51
140 6w64:B 38 28 0.6786 0.5000 0.6786 -51
141 7w0a:D 32 28 0.4286 0.3750 0.4286 -51 7w0a:H
142 7y83:C 23 23 0.4286 0.5217 0.5217 -51
143 8sfh:B 27 27 0.3214 0.3333 0.3333 -51
144 4bw0:A 26 26 0.3214 0.3462 0.3462 -52
145 4x4u:D 26 26 0.3214 0.3462 0.3462 -52
146 5ibb:4K 21 21 0.3571 0.4762 0.4762 -52
147 5mqf:Y 32 28 0.5000 0.4375 0.5000 -52
148 6gmh:P 21 21 0.3571 0.4762 0.4762 -52 6ted:P
149 6vys:7 26 26 0.3214 0.3462 0.3462 -52
150 7ade:R 32 28 0.5000 0.4375 0.5000 -52
151 7eu0:O 32 28 0.5000 0.4375 0.5000 -52
152 7ob9:R 21 21 0.3571 0.4762 0.4762 -52
153 7ozq:F 31 28 0.3929 0.3548 0.3929 -52
154 8epk:E 31 28 0.3929 0.3548 0.3929 -52 8epk:F
155 8wce:T 31 28 0.3929 0.3548 0.3929 -52
156 1f8v:R 25 25 0.3214 0.3600 0.3600 -53
157 1hvu:C 30 28 0.3571 0.3333 0.3571 -53 1hvu:F, 1hvu:I, 1hvu:L
158 1rlg:C 25 25 0.3214 0.3600 0.3600 -53 1rlg:D
159 1wsu:G 21 21 0.4286 0.5714 0.5714 -53
160 2mfg:B 21 21 0.4286 0.5714 0.5714 -53 2mfg:D
161 3snp:C 30 28 0.3571 0.3333 0.3571 -53 3snp:D
162 4ay2:C 20 20 0.3571 0.5000 0.5000 -53
163 4pwd:T 21 21 0.4286 0.5714 0.5714 -53
164 4x4p:D 30 28 0.3571 0.3333 0.3571 -53
165 4x4r:D 30 28 0.3571 0.3333 0.3571 -53 4x4s:D
166 5gam:W 25 25 0.3214 0.3600 0.3600 -53
167 5gip:G 31 28 0.4643 0.4194 0.4643 -53 5gip:Q
168 5y58:X 30 28 0.3571 0.3333 0.3571 -53 5y58:Y, 5y58:Z
169 6muu:G 25 25 0.3214 0.3600 0.3600 -53
170 6nm9:G 25 25 0.3214 0.3600 0.3600 -53 6nm9:E, 6nma:G, 6nmc:G, 6nmd:G, 6nme:G
171 6oxa:QX 20 20 0.3571 0.5000 0.5000 -53 6oxa:XX
172 6xn4:T 30 28 0.3571 0.3333 0.3571 -53
173 7azo:MRNA 30 28 0.3571 0.3333 0.3571 -53 7azo:MRNB, 7azs:MRNA, 7azs:MRNB, 6qnr:4K, 6qnr:4L, 4v6f:B1, 4v6f:C1
174 7vg3:C 30 28 0.3571 0.3333 0.3571 -53
175 7y82:C 25 25 0.3214 0.3600 0.3600 -53
176 8wq2:VTRF 26 26 0.3929 0.4231 0.4231 -53 8wq4:VTRF
177 8y7e:A 30 28 0.3571 0.3333 0.3571 -53
178 8yhe:N 30 28 0.3571 0.3333 0.3571 -53
179 1a9n:Q 24 24 0.3214 0.3750 0.3750 -54 1a9n:R
180 2x7n:A 28 28 0.2143 0.2143 0.2143 -54
181 3agv:S 19 19 0.3571 0.5263 0.5263 -54
182 3cz3:F 19 19 0.3571 0.5263 0.5263 -54 3cz3:H
183 3nvi:E 24 24 0.3214 0.3750 0.3750 -54 3nvi:F
184 3ts2:U 24 24 0.3214 0.3750 0.3750 -54 3ts2:V
185 3wbm:X 25 25 0.3929 0.4400 0.4400 -54 3wbm:Y
186 4j39:B 19 19 0.3571 0.5263 0.5263 -54
187 4j5v:B 19 19 0.3571 0.5263 0.5263 -54
188 4r8i:B 40 28 0.7143 0.5000 0.7143 -54
189 4tuw:C 28 28 0.2143 0.2143 0.2143 -54
190 4v6k:BD 24 24 0.3214 0.3750 0.3750 -54 4v6l:AD
191 4x4p:H 28 28 0.2143 0.2143 0.2143 -54
192 4ypb:QX 20 20 0.4286 0.6000 0.6000 -54 4ypb:XX, 4zsn:QX, 4zsn:XX
193 5aj0:Bx 28 28 0.2143 0.2143 0.2143 -54 4uje:AX
194 5g4v:A 19 19 0.3571 0.5263 0.5263 -54 5g4v:B, 5g4v:E, 5g4v:F
195 5gip:R 29 28 0.3214 0.3103 0.3214 -54
196 5xwp:D 30 28 0.4286 0.4000 0.4286 -54
197 5xwp:F 29 28 0.3214 0.3103 0.3214 -54
198 6gtc:B 28 28 0.2143 0.2143 0.2143 -54 6gtd:B
199 6qx9:I 25 25 0.3929 0.4400 0.4400 -54
200 6vu3:7 29 28 0.3214 0.3103 0.3214 -54
201 6xzp:IN1 20 20 0.4286 0.6000 0.6000 -54 6y0c:IN1
202 6ybw:7 28 28 0.2143 0.2143 0.2143 -54 6zmw:7
203 7aav:Z 29 28 0.3214 0.3103 0.3214 -54 7abf:Z
204 7ki3:C 29 28 0.3214 0.3103 0.3214 -54
205 7uzy:G 30 27 0.4643 0.4333 0.4815 -54 7v00:G
206 7ync:C 28 28 0.2143 0.2143 0.2143 -54
207 8c6j:E 24 24 0.3214 0.3750 0.3750 -54
208 8d4a:C 28 28 0.2143 0.2143 0.2143 -54 8d4b:C
209 8ehq:R 29 28 0.3214 0.3103 0.3214 -54 8eof:R, 8exy:R
210 8iew:B 36 28 0.6786 0.5278 0.6786 -54 8inb:B
211 8in8:I 24 24 0.3214 0.3750 0.3750 -54
212 8pnp:V 29 28 0.3214 0.3103 0.3214 -54
213 8sqj:T 35 28 0.5714 0.4571 0.5714 -54 8sqk:T
214 8wkp:VTRF 25 25 0.3929 0.4400 0.4400 -54
215 1hys:E 23 23 0.3214 0.3913 0.3913 -55
216 3ol6:B 18 18 0.3571 0.5556 0.5556 -55 3ol6:F, 3ol7:B, 3ol7:F, 3ol9:B, 3ol9:F, 3olb:B, 3olb:F
217 4b3o:R 24 24 0.3929 0.4583 0.4583 -55
218 4v6g:A1 23 23 0.3214 0.3913 0.3913 -55 4v6g:C1
219 4v9k:AV 23 23 0.3214 0.3913 0.3913 -55 4v9k:CV, 4v9l:AV, 4v9m:AV, 4v9m:CV
220 5ed2:C 23 23 0.3214 0.3913 0.3913 -55 5ed2:F, 7kfn:C
221 6fsz:2 23 23 0.3214 0.3913 0.3913 -55
222 6g63:B 23 23 0.3214 0.3913 0.3913 -55
223 6mdz:E 23 23 0.3214 0.3913 0.3913 -55
224 6mus:G 33 28 0.4286 0.3636 0.4286 -55
225 6o7i:H 19 19 0.4286 0.6316 0.6316 -55
226 6of6:QX 19 19 0.4286 0.6316 0.6316 -55
227 6w62:B 24 24 0.3929 0.4583 0.4583 -55
228 6xzg:IN1 19 19 0.4286 0.6316 0.6316 -55 6xzq:I, 6xzr:IN1
229 7kqn:B 18 18 0.3571 0.5556 0.5556 -55 7kqn:E
230 7qv2:A 29 27 0.4286 0.4138 0.4444 -55
231 7ycx:c 23 23 0.3214 0.3913 0.3913 -55
232 8g7t:Y 24 24 0.3929 0.4583 0.4583 -55 8g7u:Y
233 8h69:3 18 18 0.3571 0.5556 0.5556 -55
234 1fje:A 22 22 0.3214 0.4091 0.4091 -56
235 3htx:B 22 22 0.3214 0.4091 0.4091 -56 3htx:E
236 3j0e:A 22 22 0.3214 0.4091 0.4091 -56
237 4x4p:F 27 27 0.2857 0.2963 0.2963 -56
238 6d06:C 23 23 0.3929 0.4783 0.4783 -56
239 6e9f:C 27 27 0.2857 0.2963 0.2963 -56
240 6gbm:A 23 23 0.3929 0.4783 0.4783 -56
241 6h9h:D 23 23 0.3929 0.4783 0.4783 -56
242 6tw1:V 33 28 0.5000 0.4242 0.5000 -56
243 6waz:C 23 23 0.3929 0.4783 0.4783 -56
244 7krn:P 37 28 0.5357 0.4054 0.5357 -56 7kro:P, 7krp:P
245 7oqb:I 23 23 0.3929 0.4783 0.4783 -56
246 7to1:B 22 22 0.3214 0.4091 0.4091 -56
247 7y85:C 23 23 0.3929 0.4783 0.4783 -56
248 8asd:T 17 17 0.3571 0.5882 0.5882 -56
249 8d9g:D 23 23 0.3929 0.4783 0.4783 -56
250 8dga:F 22 22 0.3214 0.4091 0.4091 -56
251 8e0f:C 32 28 0.3929 0.3438 0.3929 -56 8e4x:C
252 8e6x:7 27 27 0.2857 0.2963 0.2963 -56 8e6z:7
253 8jch:P 23 22 0.4286 0.5217 0.5455 -56
254 8p4b:P 22 22 0.3214 0.4091 0.4091 -56
255 8qpa:z 18 18 0.4286 0.6667 0.6667 -56 8rm5:z
256 8ud5:G 27 27 0.2857 0.2963 0.2963 -56
257 8ud5:H 27 27 0.2857 0.2963 0.2963 -56
258 8yfq:P 22 22 0.3214 0.4091 0.4091 -56
259 9ash:T 22 22 0.3214 0.4091 0.4091 -56
260 1ry1:M 27 25 0.4286 0.4444 0.4800 -57
261 1wsu:E 22 22 0.3929 0.5000 0.5000 -57 1wsu:F
262 3a6p:D 22 22 0.3929 0.5000 0.5000 -57 3a6p:I
263 3dd2:B 26 26 0.2857 0.3077 0.3077 -57
264 3dh3:E 22 21 0.4286 0.5455 0.5714 -57 3dh3:F, 3dh3:G, 3dh3:H
265 3x1l:I 32 28 0.4643 0.4062 0.4643 -57
266 4jk0:B 21 21 0.3214 0.4286 0.4286 -57
267 4k50:N 32 28 0.4643 0.4062 0.4643 -57
268 4v5z:BV 22 22 0.3929 0.5000 0.5000 -57
269 4x4v:D 26 26 0.2857 0.3077 0.3077 -57
270 4yhw:E 27 26 0.3929 0.4074 0.4231 -57 4yhw:F
271 5e81:4K 21 21 0.3214 0.4286 0.4286 -57
272 5f5h:C 21 21 0.3214 0.4286 0.4286 -57 5f5h:D
273 5t16:G 34 27 0.7143 0.5882 0.7407 -57 5t16:H, 5t16:O, 5t16:P
274 6gsl:4K 21 21 0.3214 0.4286 0.4286 -57
275 6iv6:G 26 26 0.2857 0.3077 0.3077 -57
276 6kyv:A 22 22 0.3929 0.5000 0.5000 -57 6kyv:C, 6kyv:E, 6kyv:G, 6kyv:I, 6kyv:K
277 6p7m:B 26 26 0.2857 0.3077 0.3077 -57 6p7n:B, 6p7n:F
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295 2mff:B 21 21 0.3929 0.5238 0.5238 -58 2mff:D
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297 2y8w:B 20 20 0.3214 0.4500 0.4500 -58
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330 5lm7:R 29 28 0.2857 0.2759 0.2857 -59
331 6gte:B 29 28 0.2857 0.2759 0.2857 -59 6gtf:B
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334 7bkq:Y 15 15 0.4286 0.8000 0.8000 -59 6g1s:Y, 6g1x:Y, 6h61:Y, 6h66:Y, 7nga:X
335 7cxm:I 25 25 0.3571 0.4000 0.4000 -59 7cxn:I, 7cyq:I, 7egq:I, 7egq:L, 7eiz:I, 8gw1:I, 8gwb:I, 8gwe:I, 8gwf:I, 8gwg:I, 8gwi:I, 8gwk:I, 8gwm:I, 8gwn:I, 8gwo:I
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337 7w0f:C 21 21 0.4643 0.6190 0.6190 -59
338 8eey:D 28 28 0.1786 0.1786 0.1786 -59
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349 5hp2:C 23 23 0.2857 0.3478 0.3478 -60
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351 5y6z:F 18 18 0.3214 0.5000 0.5000 -60
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361 8i87:H 18 18 0.3214 0.5000 0.5000 -60 8i87:I, 8i87:L, 8i87:S
362 8id2:C 24 24 0.3571 0.4167 0.4167 -60 8id2:D, 7p0v:B
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366 1u1y:R 17 17 0.3214 0.5294 0.5294 -61
367 2bq5:S 17 17 0.3214 0.5294 0.5294 -61 2bu1:R, 2bu1:S, 2c4q:R, 2c4q:S, 2c4y:R, 2c4z:R
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370 4a36:U 18 18 0.3929 0.6111 0.6111 -61
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374 5ns4:C 32 28 0.3571 0.3125 0.3571 -61
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376 6o1k:O 18 18 0.3929 0.6111 0.6111 -61 6o1k:P, 6o1l:O, 6o1l:P, 6o1m:O, 6o1m:P
377 6otr:QX 17 17 0.3214 0.5294 0.5294 -61 6otr:XX
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379 6wb1:C 33 27 0.5000 0.4242 0.5185 -61 6wb2:C
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385 7y8y:E 18 18 0.3929 0.6111 0.6111 -61
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387 8jl0:C 22 22 0.2857 0.3636 0.3636 -61
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393 2mfe:B 22 22 0.3571 0.4545 0.4545 -62 2mfe:D
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399 5n8l:C 21 21 0.2857 0.3810 0.3810 -62 5n8m:C
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410 7tj2:H 31 28 0.3214 0.2903 0.3214 -62
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427 3trz:U 21 21 0.3571 0.4762 0.4762 -63 3trz:V, 3trz:W, 3trz:X, 3trz:Y, 3trz:Z
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429 4b3q:R 21 21 0.3571 0.4762 0.4762 -63
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433 5n8l:B 21 21 0.3571 0.4762 0.4762 -63 5n8m:B
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454 1r9f:B 20 20 0.3571 0.5000 0.5000 -64
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532 4x4u:G 18 18 0.3571 0.5556 0.5556 -66
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554 2lup:A 32 28 0.3929 0.3438 0.3929 -67 1t4l:A
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557 3j81:3 22 22 0.3214 0.4091 0.4091 -67
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830 7y8t:D 37 28 0.5714 0.4324 0.5714 -73 7y8y:D
831 8e2a:B 15 15 0.2500 0.4667 0.4667 -73
832 8psn:S 15 15 0.2500 0.4667 0.4667 -73 8pso:S, 8psu:S, 8pt6:S
833 8r0s:C 17 17 0.3929 0.6471 0.6471 -73
834 8r3l:R 15 15 0.2500 0.4667 0.4667 -73
835 8r3l:V 16 16 0.3214 0.5625 0.5625 -73
836 8r6u:P 16 16 0.3214 0.5625 0.5625 -73 8r6w:P, 8r6y:P
837 8t5s:B 30 28 0.2143 0.2000 0.2143 -73
838 8t5s:C 30 28 0.2143 0.2000 0.2143 -73
839 9f2r:R 15 15 0.2500 0.4667 0.4667 -73 9f37:R, 6qcs:R, 6t0n:R, 4wrt:R
840 1q2r:E 20 20 0.2857 0.4000 0.4000 -74 1q2r:F, 1q2s:F
841 1sds:D 15 15 0.3214 0.6000 0.6000 -74 1sds:E, 1sds:F
842 1t0k:D 15 15 0.3214 0.6000 0.6000 -74
843 4a2x:M 14 14 0.2500 0.5000 0.5000 -74 4a2x:O
844 4a36:R 19 19 0.2143 0.3158 0.3158 -74
845 4ang:R 14 14 0.2500 0.5000 0.5000 -74
846 4c4w:D 35 28 0.4286 0.3429 0.4286 -74 4c4w:H
847 4k4w:G 15 15 0.3214 0.6000 0.6000 -74
848 4ktg:B 19 19 0.2143 0.3158 0.3158 -74 4ktg:E
849 4l8h:R 20 20 0.2857 0.4000 0.4000 -74
850 4qi2:G 19 19 0.2143 0.3158 0.3158 -74
851 4wq1:4K 15 15 0.3214 0.6000 0.6000 -74
852 5bs3:F 19 19 0.1786 0.2632 0.2632 -74
853 5fj4:D 35 28 0.4286 0.3429 0.4286 -74 5fj4:H
854 5ibb:4L 19 19 0.2143 0.3158 0.3158 -74
855 5kpv:29 20 20 0.2857 0.4000 0.4000 -74 5kpw:29, 5kpx:29, 5uyk:V
856 5lmn:Y 20 20 0.2857 0.4000 0.4000 -74 5lmp:Y, 5lms:Y, 5lmt:Y, 5lmu:Y, 5lmv:Y
857 5mps:I 34 28 0.3214 0.2647 0.3214 -74 5mq0:I
858 5ux0:B 20 20 0.2857 0.4000 0.4000 -74
859 5voe:A 36 28 0.5357 0.4167 0.5357 -74 5vof:A
860 6gkh:X 15 15 0.3214 0.6000 0.6000 -74 7nic:X
861 6j4w:P 16 16 0.3929 0.6875 0.6875 -74
862 6n4o:D 14 14 0.2500 0.5000 0.5000 -74
863 6nit:F 20 20 0.2857 0.4000 0.4000 -74
864 6xn4:R 35 28 0.4286 0.3429 0.4286 -74
865 6ztj:AV 40 28 0.5714 0.4000 0.5714 -74
866 7asa:2 34 28 0.3214 0.2647 0.3214 -74
867 7k51:4 16 16 0.3929 0.6875 0.6875 -74 7k52:4
868 7onb:G 14 14 0.2500 0.5000 0.5000 -74
869 7orm:P 15 15 0.3214 0.6000 0.6000 -74
870 7ss9:4 20 20 0.2857 0.4000 0.4000 -74 7ssw:4
871 7swq:D 14 14 0.2500 0.5000 0.5000 -74
872 7vg2:C 35 28 0.4286 0.3429 0.4286 -74
873 8a40:P 14 14 0.2500 0.5000 0.5000 -74
874 8a98:S4 19 19 0.2143 0.3158 0.3158 -74
875 8d1v:J 34 28 0.3214 0.2647 0.3214 -74
876 8eoe:R 15 15 0.3214 0.6000 0.6000 -74
877 8ibw:D 39 28 0.4643 0.3333 0.4643 -74 8ibx:D
878 8j7s:C 19 19 0.2143 0.3158 0.3158 -74 8j7s:G, 8j7s:K, 8j7s:O, 8spo:C, 8spo:O
879 8psq:S 15 15 0.3214 0.6000 0.6000 -74 8pss:S, 8pt7:S
880 8ptg:R 15 15 0.3214 0.6000 0.6000 -74
881 8qxd:Z 15 15 0.3214 0.6000 0.6000 -74 8qzs:Z, 8r08:Z, 8r09:Z, 8r0a:Z, 8r0b:Z, 8rm5:Z
882 8s9v:G 34 28 0.3214 0.2647 0.3214 -74
883 8uha:P 15 15 0.3214 0.6000 0.6000 -74 8uhd:P, 8uhg:P
884 8ves:H 19 19 0.2143 0.3158 0.3158 -74
885 8yhd:N 35 28 0.4286 0.3429 0.4286 -74
886 2dr9:B 34 28 0.3929 0.3235 0.3929 -75 2dra:B, 2dvi:B
887 2l3c:B 34 28 0.3929 0.3235 0.3929 -75
888 2zh3:B 34 28 0.3929 0.3235 0.3929 -75
889 2zh5:B 34 28 0.3929 0.3235 0.3929 -75 2zh6:B
890 3j0q:9 19 19 0.2857 0.4211 0.4211 -75
891 4a36:T 18 18 0.2143 0.3333 0.3333 -75
892 4c8z:C 15 15 0.3929 0.7333 0.7333 -75
893 4c9d:D 14 14 0.3214 0.6429 0.6429 -75
894 4k4y:B 18 18 0.2143 0.3333 0.3333 -75 4k4y:J
895 4qi2:F 18 18 0.2143 0.3333 0.3333 -75 4qi2:H
896 4wqr:4K 14 14 0.3214 0.6429 0.6429 -75
897 6dnc:KA 19 19 0.2857 0.4211 0.4211 -75
898 6gsk:4L 14 14 0.3214 0.6429 0.6429 -75
899 6jnx:R 18 18 0.2143 0.3333 0.3333 -75
900 6mu5:T 13 13 0.2500 0.5385 0.5385 -75
901 6mut:H 19 19 0.2857 0.4211 0.4211 -75
902 6nsh:XX 19 19 0.2857 0.4211 0.4211 -75
903 6nuo:QX 19 19 0.2857 0.4211 0.4211 -75 6o3m:XX
904 6oj6:T 14 14 0.3214 0.6429 0.6429 -75
905 6qwl:W 14 14 0.3214 0.6429 0.6429 -75
906 6x5m:R 39 28 0.5357 0.3846 0.5357 -75 6x5m:r, 6x5n:R, 6x5n:r
907 6xn3:T 34 27 0.4286 0.3529 0.4444 -75
908 6yyt:P 14 14 0.3214 0.6429 0.6429 -75 6yyt:Q, 6yyt:U
909 6zm5:y 19 19 0.2857 0.4211 0.4211 -75 6zm6:y
910 7a9x:B 13 13 0.2500 0.5385 0.5385 -75
911 7lyt:B 39 28 0.5357 0.3846 0.5357 -75
912 7niq:C 14 14 0.3214 0.6429 0.6429 -75
913 7ork:T 18 18 0.2143 0.3333 0.3333 -75 7orn:T
914 7orm:H 14 14 0.3214 0.6429 0.6429 -75 7oro:H
915 7uo4:P 34 28 0.3929 0.3235 0.3929 -75
916 7xsx:P 19 19 0.2857 0.4211 0.4211 -75 7xt7:P
917 8asb:T 18 18 0.2143 0.3333 0.3333 -75
918 8bek:V 14 14 0.3214 0.6429 0.6429 -75 6f5o:V, 5m3j:V, 5msg:V, 6qcs:V, 6qcv:V, 6qcw:V, 6qcx:V, 7r0e:V, 6szv:V, 6t0n:V, 6t0v:V, 4wrt:V, 4wsa:V, 7z43:VVV
919 8c4v:H 19 17 0.3571 0.5263 0.5882 -75
920 8h0i:X 19 19 0.2857 0.4211 0.4211 -75 8h0i:Y
921 8h0v:P 14 14 0.3214 0.6429 0.6429 -75
922 8h67:B 38 28 0.4286 0.3158 0.4286 -75
923 8i54:B 33 28 0.2857 0.2424 0.2857 -75
924 8ova:AB 19 19 0.2857 0.4211 0.4211 -75 8ove:AB
925 8psq:V 13 13 0.2500 0.5385 0.5385 -75
926 8psx:S 13 13 0.2500 0.5385 0.5385 -75 8psz:S
927 8qpp:V 33 28 0.2857 0.2424 0.2857 -75 8r55:V
928 8sfl:B 34 28 0.3929 0.3235 0.3929 -75
929 8ud4:H 23 23 0.1786 0.2174 0.2174 -75
930 8urw:R 14 14 0.3214 0.6429 0.6429 -75
931 8y6o:A 13 13 0.2500 0.5385 0.5385 -75
932 8z4j:N 34 28 0.3929 0.3235 0.3929 -75 8z9e:N
933 8z97:F 13 13 0.2500 0.5385 0.5385 -75 8z9h:F, 8z9r:F
934 1d6k:B 37 28 0.3929 0.2973 0.3929 -76
935 1r3e:C 17 17 0.2143 0.3529 0.3529 -76 1r3e:D
936 1tfw:J 13 13 0.3214 0.6923 0.6923 -76
937 1yyk:C 12 12 0.2500 0.5833 0.5833 -76 1yyk:D, 1yyk:E, 1yyk:F, 1yyo:C, 1yyo:D, 1yyo:E, 1yyo:F
938 2dr7:B 33 28 0.3571 0.3030 0.3571 -76 2dr8:B
939 2gjw:E 18 18 0.2857 0.4444 0.4444 -76
940 2om7:D 13 13 0.3214 0.6923 0.6923 -76
941 2ozb:C 33 28 0.3571 0.3030 0.3571 -76 2ozb:F
942 2qk9:B 18 18 0.2857 0.4444 0.4444 -76
943 2zh1:B 33 28 0.3571 0.3030 0.3571 -76
944 2zh8:B 34 27 0.5000 0.4118 0.5185 -76
945 2zh9:B 33 28 0.3571 0.3030 0.3571 -76 2zha:B
946 3ks8:F 18 18 0.2857 0.4444 0.4444 -76
947 4ill:C 17 17 0.2143 0.3529 0.3529 -76
948 4k4s:C 13 13 0.3214 0.6923 0.6923 -76 4k4s:G
949 4kzz:k 13 13 0.3214 0.6923 0.6923 -76
950 4pdb:I 38 28 0.5000 0.3684 0.5000 -76
951 4qik:D 18 18 0.2857 0.4444 0.4444 -76
952 4v7c:AX 18 18 0.2857 0.4444 0.4444 -76
953 4v99:AD 17 17 0.2143 0.3529 0.3529 -76 4v99:AI, 4v99:AN, 4v99:AS, 4v99:AX, 4v99:Ac, 4v99:Ah, 4v99:Am, 4v99:Ar, 4v99:Aw, 4v99:A2, 4v99:A7, 4v99:BD, 4v99:BI, 4v99:BN, 4v99:BS, 4v99:BX, 4v99:Bc, 4v99:Bh, 4v99:Bm, 4v99:Br, 4v99:Bw, 4v99:B2, 4v99:B7, 4v99:CD, 4v99:CI, 4v99:CN, 4v99:CS, 4v99:CX, 4v99:Cc, 4v99:Ch, 4v99:Cm, 4v99:Cr, 4v99:Cw, 4v99:C2, 4v99:C7, 4v99:DD, 4v99:DI, 4v99:DN, 4v99:DS, 4v99:DX, 4v99:Dc, 4v99:Dh, 4v99:Dm, 4v99:Dr, 4v99:Dw, 4v99:D2, 4v99:D7, 4v99:ED, 4v99:EI, 4v99:EN, 4v99:ES, 4v99:EX, 4v99:Ec, 4v99:Eh, 4v99:Em, 4v99:Er, 4v99:Ew, 4v99:E2, 4v99:E7, 4v99:FD, 4v99:FI, 4v99:FN, 4v99:FS, 4v99:FX, 4v99:Fc, 4v99:Fh, 4v99:Fm, 4v99:Fr, 4v99:Fw, 4v99:F2, 4v99:F7, 4v99:GD, 4v99:GI, 4v99:GN, 4v99:GS, 4v99:GX, 4v99:Gc, 4v99:Gh, 4v99:Gm, 4v99:Gr, 4v99:Gw, 4v99:G2, 4v99:G7, 4v99:HD, 4v99:HI, 4v99:HN, 4v99:HS, 4v99:HX, 4v99:Hc, 4v99:Hh, 4v99:Hm, 4v99:Hr, 4v99:Hw, 4v99:H2, 4v99:H7, 4v99:ID, 4v99:II, 4v99:IN, 4v99:IS, 4v99:IX, 4v99:Ic, 4v99:Ih, 4v99:Im, 4v99:Ir, 4v99:Iw, 4v99:I2, 4v99:I7, 4v99:JD, 4v99:JI, 4v99:JN, 4v99:JS, 4v99:JX, 4v99:Jc, 4v99:Jh, 4v99:Jm, 4v99:Jr, 4v99:Jw, 4v99:J2, 4v99:J7
954 5k36:L 17 17 0.2143 0.3529 0.3529 -76
955 5uyq:V 18 18 0.2857 0.4444 0.4444 -76
956 6cbd:B 19 19 0.3571 0.5263 0.5263 -76 4z4c:B, 4z4e:B
957 6d8a:C 18 18 0.2857 0.4444 0.4444 -76 6d8a:H, 6d8f:C, 6d8f:H, 6d8p:E, 6d8p:C, 6d92:C, 6d92:H, 6d95:B, 6d95:H, 6d9k:C, 6d9k:H
958 6gpg:B 13 13 0.3214 0.6923 0.6923 -76
959 6mdz:F 17 17 0.2143 0.3529 0.3529 -76
960 6swe:4 18 18 0.2857 0.4444 0.4444 -76
961 6vyq:7 32 28 0.2500 0.2188 0.2500 -76 6vzj:7
962 6wdh:4 18 18 0.2857 0.4444 0.4444 -76 6wdi:4, 6wdj:4, 6wdk:4, 6wdm:4
963 6xas:R 18 18 0.2857 0.4444 0.4444 -76
964 7ctt:T 18 17 0.3214 0.5000 0.5294 -76
965 7k50:4 18 18 0.2857 0.4444 0.4444 -76
966 7l1f:T 18 18 0.2857 0.4444 0.4444 -76
967 7sbb:X 33 28 0.3571 0.3030 0.3571 -76
968 7w59:4 13 13 0.3214 0.6923 0.6923 -76 7w5a:4, 7w5b:4, 6zym:Z
969 8a3w:S4 17 17 0.2143 0.3529 0.3529 -76
970 8c4u:T 18 18 0.2857 0.4444 0.4444 -76
971 8e40:R 22 22 0.1786 0.2273 0.2273 -76
972 8h0w:P 14 14 0.3929 0.7857 0.7857 -76
973 8psn:V 13 13 0.3214 0.6923 0.6923 -76 8pso:V, 8psz:V, 8pt2:V, 8pt6:V, 8pth:V
974 8tvs:R 12 12 0.2500 0.5833 0.5833 -76 8tvv:R
975 8ud3:H 17 17 0.2143 0.3529 0.3529 -76
976 8waz:Z 13 13 0.3214 0.6923 0.6923 -76
977 8wid:b 18 18 0.2857 0.4444 0.4444 -76
978 8z8x:D 18 18 0.2857 0.4444 0.4444 -76 8z90:D
979 1aq3:R 16 16 0.2143 0.3750 0.3750 -77 1aq4:R, 2b2e:R, 2b2g:R, 1zdi:R
980 2iz8:R 16 16 0.2143 0.3750 0.3750 -77
981 3j0e:B 17 17 0.2857 0.4706 0.4706 -77
982 3jbv:X 11 11 0.2500 0.6364 0.6364 -77
983 4al6:B 16 16 0.2143 0.3750 0.3750 -77 2xli:B, 2xlj:B, 2xlk:C, 2xlk:D
984 4gg4:H 16 16 0.2143 0.3750 0.3750 -77
985 4ngf:E 17 15 0.3571 0.5882 0.6667 -77 4ngf:F, 4ngf:G, 4ngf:H
986 4v4r:AX 17 17 0.2857 0.4706 0.4706 -77
987 4v9c:AX 16 16 0.2143 0.3750 0.3750 -77 4woi:DV
988 4w5q:B 18 17 0.3929 0.6111 0.6471 -77
989 5d0b:F 17 17 0.2857 0.4706 0.4706 -77
990 5e3h:B 12 12 0.3214 0.7500 0.7500 -77
991 5e3h:C 12 12 0.3214 0.7500 0.7500 -77
992 5f8l:B 12 12 0.3214 0.7500 0.7500 -77 5f8m:B
993 5lmr:Y 17 17 0.2857 0.4706 0.4706 -77
994 5oc6:B 11 11 0.2500 0.6364 0.6364 -77 5oc6:C, 1yz9:C, 1yz9:D, 1yz9:E, 1yz9:F
995 6a5l:P 11 11 0.2500 0.6364 0.6364 -77 6a5t:P, 6a5u:P
996 6bjs:R 11 11 0.2500 0.6364 0.6364 -77
997 6qcv:R 21 21 0.1786 0.2381 0.2381 -77 6qcw:R, 6qcx:R
998 6qnq:4L 21 21 0.1786 0.2381 0.2381 -77
999 6xu7:v 12 12 0.3214 0.7500 0.7500 -77
1000 7a9w:B 16 16 0.2143 0.3750 0.3750 -77

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218