aucagguugauucugccugacguggaugcuauucucuggggcuaagccaugcaugcuugugaacucuuugugggggauua
gcggacggcucagugauagcacgaugauuuguuugcgggaugagcaguagcugcgggaaacugcagauaguggucugccc
cuguggggguuggcaaguaaguugugggccuaucagcugguaguuaggguaauggccuaacuaggcgcagacgggauacg
ggggaucaggguuugguuccggagagggagccugagagauggcuacuacguccaaggauggcagcaggcgcgaaacuugc
cuaauccuuuggggaggcgguuaugagaagugaugugugugcgagugcaaaggggucgcaugugauuggagggcaagucg
ggugccagcagccgcgguaauaccugcuccaauagugucuaugguggaugcugcaguuaaaauguccguagucuguguau
gucuuugugugugauguuugugguuguguguggauguagugaguguguggcagaggacgaggggcacuggauaguugggc
gagaggugaaaugcgaagacccugacuggacgagcggaagcgaaggcugugcucuuggacuaauguugcgaugaaggacg
aaggcuagaggaucgaaaucgauuagauaccguuuuaguucuagcaguaaacgaugccgacuggacgggacagugugugu
uguccaugagaaaucuugaguaugcggguucuggggauaguaugcucgcaagagugaaacuugaagagauugacggaagg
acaccacaaggaguggagugugcggcuuaauuugacucaacgcggggcaacuuaccggcucugaaggaugccugugagug
cauggcaugaggcaugcggcgguggugcauggccguuuuaaauggauggcgugagcuuugucuuaaguugcguaagaugu
gagacccuuugacgguguucuacggagcaaggaggggauggaagagaacagguccguuaugcccugagaugaggcgggcu
gcacgcgcacuacgauagauggcgcuucugccugcugugagggaugaagcuguguaaggggcuucugaacguggaauucc
uaguaauagcggcugacgaagcugcuuugaaugugucccuguccuuuguacacaccgcccgucgcuaucuaagaugacgc
acuggacgaagaucggaaggucugaguccugaguguuagauaagauauaagucguaacauggcugcuguuggagaaccag
cagcaggaucaguau
The query sequence (length=1295) is searched through a non-redundant set of database sequences rna_nr.fasta.gz clustered at 100% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.
# | Hit | Hit length |
Aligned length |
Identity (normalized by query) |
Identity (normalized by hit) |
Identity (normalized by aligned length) |
E-value | Homologs to hit |
---|---|---|---|---|---|---|---|---|
1 | 7qep:3 | 1295 | 1295 | 1.0000 | 1.0000 | 1.0000 | 0.0 | |
2 | 6zu5:S60 | 1336 | 305 | 0.1931 | 0.1871 | 0.8197 | 1.57e-66 | |
3 | 6rm3:S60 | 1231 | 325 | 0.2015 | 0.2120 | 0.8031 | 1.22e-62 | |
4 | 8p5d:S60 | 1354 | 695 | 0.3954 | 0.3781 | 0.7367 | 7.37e-60 | 8p60:S60, 8p60:R60, 7qca:S60 |
5 | 8p5d:S60 | 1354 | 53 | 0.0355 | 0.0340 | 0.8679 | 2.85e-09 | 8p60:S60, 8p60:R60, 7qca:S60 |