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BioLiP
>rna
aggagguaaaaaugccaag

The query sequence (length=19) is searched through a non-redundant set of database sequences rna_nr.fasta.gz clustered at 100% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
Alignment
score
Homologs
to hit
1 7ssl:4 19 19 1.0000 1.0000 1.0000 38 7ssn:4, 7sso:4, 7st2:4, 7st7:4
2 7ss9:4 20 19 1.0000 0.9500 1.0000 23 7ssw:4
3 7k50:4 18 18 0.9474 1.0000 1.0000 21
4 6dnc:KA 19 19 0.7895 0.7895 0.7895 18
5 7k53:4 18 18 0.8947 0.9444 0.9444 16 7lv0:4
6 5kpv:29 20 19 0.8947 0.8500 0.8947 13 5kpw:29, 5kpx:29, 5uyk:V
7 5uyq:V 18 18 0.8421 0.8889 0.8889 11
8 6wdh:4 18 18 0.8421 0.8889 0.8889 11 6wdi:4, 6wdj:4, 6wdk:4, 6wdm:4
9 7k51:4 16 16 0.8421 1.0000 1.0000 9 7k52:4
10 6ofx:4 20 19 0.8421 0.8000 0.8421 8 6og7:4, 6ogf:4, 6ogg:4, 6ogi:4
11 7jt1:4 20 19 0.8421 0.8000 0.8421 8
12 5el6:4L 18 18 0.7895 0.8333 0.8333 6
13 6bu8:V 18 18 0.7895 0.8333 0.8333 6 5kps:30, 5uyl:V, 5uym:V, 6wd1:4, 6wd2:4, 6wd3:4, 6wd4:4, 6wd6:4, 6wd8:4, 6wd9:4, 6wdc:4, 6wdd:4, 6wde:4, 6wdg:4
14 6qnq:4L 21 19 0.8421 0.7619 0.8421 4
15 6yef:v 21 19 0.8421 0.7619 0.8421 4
16 7jss:4 16 16 0.7895 0.9375 0.9375 4 7jsz:4
17 7jt2:4 21 19 0.8421 0.7619 0.8421 4
18 7k54:4 16 16 0.7895 0.9375 0.9375 4 7k55:4
19 6of6:QX 19 18 0.8947 0.8947 0.9444 1
20 7zag:5 22 19 0.8421 0.7273 0.8421 0 7zah:5, 7zai:5
21 6oj2:XX 17 17 0.8421 0.9412 0.9412 -1
22 5o5j:W 19 19 0.5789 0.5789 0.5789 -2 4v51:AY
23 6xzg:IN1 19 19 0.5789 0.5789 0.5789 -2 6xzq:I, 6xzr:IN1
24 7jt3:4 14 14 0.7368 1.0000 1.0000 -3 5u9g:V
25 4v7c:AX 18 18 0.6842 0.7222 0.7222 -4
26 7n0b:D 19 19 0.5263 0.5263 0.5263 -7
27 4ypb:QX 20 18 0.8421 0.8000 0.8889 -8 4ypb:XX, 4zsn:QX, 4zsn:XX
28 4yzv:QX 20 18 0.8421 0.8000 0.8889 -8 4yzv:XX
29 5el7:4L 19 18 0.7895 0.7895 0.8333 -9
30 4v4j:3 18 17 0.7895 0.8333 0.8824 -10
31 4v5z:BM 19 19 0.4737 0.4737 0.4737 -12
32 4v9c:CX 15 15 0.6316 0.8000 0.8000 -12 4v9d:AX, 4woi:AW
33 6gsl:4K 21 18 0.8421 0.7619 0.8889 -12
34 7ssd:4 16 15 0.7895 0.9375 1.0000 -12
35 8c4v:H 19 19 0.4737 0.4737 0.4737 -12
36 5el5:4K 20 18 0.7895 0.7500 0.8333 -13 5el7:4K
37 5ib8:4K 20 18 0.7895 0.7500 0.8333 -13
38 6oxa:QX 20 18 0.7895 0.7500 0.8333 -13 6oxa:XX
39 4v6g:A1 23 19 0.8421 0.6957 0.8421 -15 4v6g:C1
40 4v9k:AV 23 19 0.8421 0.6957 0.8421 -15 4v9k:CV, 4v9l:AV, 4v9m:AV, 4v9m:CV
41 4w4g:QX 18 16 0.7895 0.8333 0.9375 -15 4w4g:XX
42 7v6c:C 21 19 0.6316 0.5714 0.6316 -16
43 3j0q:9 19 19 0.4211 0.4211 0.4211 -17
44 5e81:4K 21 18 0.7895 0.7143 0.8333 -17
45 5ibb:4K 21 18 0.7895 0.7143 0.8333 -17
46 6mdz:C 20 19 0.5789 0.5500 0.5789 -17 6mfr:C
47 6n4o:C 19 19 0.4211 0.4211 0.4211 -17
48 6ty9:T 19 19 0.4211 0.4211 0.4211 -17
49 6xzd:IN1 20 19 0.5789 0.5500 0.5789 -17
50 7xc7:J 19 19 0.4211 0.4211 0.4211 -17
51 6sw9:5 20 17 0.7895 0.7500 0.8824 -18 6swc:5, 6swd:5
52 5e81:4L 19 17 0.7368 0.7368 0.8235 -19
53 5ib7:4K 19 18 0.6842 0.6842 0.7222 -19
54 5ib7:4L 19 17 0.7368 0.7368 0.8235 -19 5ib8:4L
55 5ibb:4L 19 17 0.7368 0.7368 0.8235 -19
56 6ww6:C 18 18 0.5263 0.5556 0.5556 -19
57 4p6f:XY 17 17 0.5263 0.5882 0.5882 -20
58 4v8j:AY 17 17 0.5263 0.5882 0.5882 -20 4v8j:CY
59 6oxi:QX 18 16 0.7368 0.7778 0.8750 -20 6oxi:XX
60 7orj:H 17 17 0.5263 0.5882 0.5882 -20 7ork:H, 7orl:H, 7orn:H
61 7zhg:5 17 17 0.5263 0.5882 0.5882 -20
62 1aq3:R 16 16 0.5263 0.6250 0.6250 -21 1aq4:R, 2b2e:R, 2b2g:R, 1zdi:R
63 2i82:E 21 19 0.5789 0.5238 0.5789 -21 2i82:F, 2i82:G, 2i82:H
64 2iz8:R 16 16 0.5263 0.6250 0.6250 -21
65 6otr:QX 17 15 0.7368 0.8235 0.9333 -21 6otr:XX
66 1dfu:N 19 19 0.3684 0.3684 0.3684 -22
67 2b2g:S 15 15 0.5263 0.6667 0.6667 -22 2bny:R, 2iz9:R, 2iz9:S
68 3cz3:F 19 19 0.3684 0.3684 0.3684 -22 3cz3:H
69 4puo:E 19 19 0.3684 0.3684 0.3684 -22
70 6nit:F 20 19 0.5263 0.5000 0.5263 -22
71 6nuo:QX 19 19 0.3684 0.3684 0.3684 -22 6o3m:XX
72 6xzp:IN1 20 19 0.5263 0.5000 0.5263 -22 6y0c:IN1
73 6ys5:7 20 19 0.5263 0.5000 0.5263 -22
74 7xss:A 20 19 0.5263 0.5000 0.5263 -22
75 8g6r:I 20 19 0.5263 0.5000 0.5263 -22
76 8h69:5 19 19 0.3684 0.3684 0.3684 -22
77 8p4a:P 19 19 0.3684 0.3684 0.3684 -22
78 8p4d:P 19 19 0.3684 0.3684 0.3684 -22
79 5y6z:F 18 18 0.4737 0.5000 0.5000 -24
80 6nit:C 18 18 0.4737 0.5000 0.5000 -24
81 6o1k:O 18 18 0.4737 0.5000 0.5000 -24 6o1k:P, 6o1l:O, 6o1l:P, 6o1m:O, 6o1m:P
82 7y8y:E 18 18 0.4737 0.5000 0.5000 -24
83 8z8x:D 18 18 0.4737 0.5000 0.5000 -24 8z90:D
84 3j0e:B 17 17 0.4737 0.5294 0.5294 -25
85 5xpg:G 17 17 0.4737 0.5294 0.5294 -25
86 6gaw:AX 17 17 0.4737 0.5294 0.5294 -25 6gaz:AX
87 8p4c:P 17 17 0.4737 0.5294 0.5294 -25
88 8ud3:H 17 17 0.4737 0.5294 0.5294 -25
89 3trz:U 21 19 0.5263 0.4762 0.5263 -26 3trz:V, 3trz:W, 3trz:X, 3trz:Y, 3trz:Z
90 4gg4:H 16 16 0.4737 0.5625 0.5625 -26
91 4v8e:D1 16 16 0.4737 0.5625 0.5625 -26 4v8f:B1, 4v8f:C1
92 4v9c:AX 16 16 0.4737 0.5625 0.5625 -26 4woi:DV
93 6evk:V 16 16 0.4737 0.5625 0.5625 -26 9f2r:V, 9f37:V, 6fhh:V, 6fhi:V, 5m3h:V, 4wsb:V
94 7rr5:m 16 16 0.4737 0.5625 0.5625 -26
95 7xt4:a 21 19 0.5263 0.4762 0.5263 -26
96 8r3l:V 16 16 0.4737 0.5625 0.5625 -26
97 8r6u:P 16 16 0.4737 0.5625 0.5625 -26 8r6w:P, 8r6y:P
98 1dfu:M 19 19 0.3158 0.3158 0.3158 -27
99 1ec6:C 20 19 0.4737 0.4500 0.4737 -27 1ec6:D
100 2c51:R 15 15 0.4737 0.6000 0.6000 -27
101 2gjw:I 19 19 0.3158 0.3158 0.3158 -27
102 3ol6:J 19 19 0.3158 0.3158 0.3158 -27 3ol6:N, 3ol9:J, 3ol9:N, 3olb:J, 3olb:N
103 4ill:R 19 19 0.3158 0.3158 0.3158 -27
104 4py5:B 19 19 0.3158 0.3158 0.3158 -27
105 5oik:P 20 19 0.4737 0.4500 0.4737 -27
106 6evj:U 15 15 0.4737 0.6000 0.6000 -27 6evj:V
107 6htu:D 19 19 0.3158 0.3158 0.3158 -27
108 6nsh:XX 19 19 0.3158 0.3158 0.3158 -27
109 6qcv:M 15 15 0.4737 0.6000 0.6000 -27 6qcw:M
110 6sx0:C 19 19 0.3158 0.3158 0.3158 -27 6sx0:D, 6sx2:C, 6sx2:D
111 6t0r:V 20 19 0.4737 0.4500 0.4737 -27
112 7abz:8 15 15 0.4737 0.6000 0.6000 -27 7ac7:8
113 7ki3:B 19 19 0.3158 0.3158 0.3158 -27
114 7n0b:T 20 19 0.4737 0.4500 0.4737 -27
115 7n0d:T 19 19 0.3158 0.3158 0.3158 -27 7n0d:I
116 7qp6:7 20 19 0.4737 0.4500 0.4737 -27
117 7xd9:N 19 19 0.3158 0.3158 0.3158 -27
118 7xsp:A 15 15 0.4737 0.6000 0.6000 -27 7xsr:A
119 8c4u:H 20 19 0.4737 0.4500 0.4737 -27
120 8dga:E 19 19 0.3158 0.3158 0.3158 -27
121 8fnf:m 20 19 0.4737 0.4500 0.4737 -27
122 8j7s:C 19 19 0.3158 0.3158 0.3158 -27 8j7s:G, 8j7s:K, 8j7s:O, 8spo:C, 8spo:O
123 8psn:S 15 15 0.4737 0.6000 0.6000 -27 8pso:S, 8psu:S, 8pt6:S
124 8urb:I 20 19 0.4737 0.4500 0.4737 -27
125 6kuk:V 15 15 0.5789 0.7333 0.7333 -28 6kup:V, 6kur:V, 6kut:V, 6kuu:V
126 7mjv:E 15 15 0.5789 0.7333 0.7333 -28
127 7nha:D 15 15 0.5789 0.7333 0.7333 -28 7nhc:D, 7nhx:F, 7ni0:D, 7nik:D, 7nil:D, 7nir:D, 7nis:D, 7nj3:D, 7nj4:D, 7nj5:D, 7nj7:D, 7nk1:D, 7nk2:D, 7nk4:D, 7nk6:D, 7nk8:D, 7nka:D, 7nkc:D, 7nki:D, 7nkr:D, 8r60:D, 8r65:D
128 8bek:V 14 14 0.4737 0.6429 0.6429 -28 6f5o:V, 5m3j:V, 5msg:V, 6qcs:V, 6qcv:V, 6qcw:V, 6qcx:V, 7r0e:V, 6szv:V, 6t0n:V, 6t0v:V, 4wrt:V, 4wsa:V, 7z43:VVV
129 3ks8:E 18 18 0.4211 0.4444 0.4444 -29
130 4a2x:L 14 14 0.5789 0.7857 0.7857 -29 4a2x:N
131 5dv7:B 18 18 0.4211 0.4444 0.4444 -29
132 6gsk:4K 18 18 0.4211 0.4444 0.4444 -29
133 6tph:B 23 19 0.5789 0.4783 0.5789 -29
134 7ctt:T 18 18 0.4211 0.4444 0.4444 -29
135 7ork:T 18 18 0.4211 0.4444 0.4444 -29 7orn:T
136 8d1v:N 18 18 0.4211 0.4444 0.4444 -29
137 8i87:H 18 18 0.4211 0.4444 0.4444 -29 8i87:I, 8i87:L, 8i87:S
138 8jr8:G 18 18 0.4211 0.4444 0.4444 -29
139 1r3e:C 17 17 0.4211 0.4706 0.4706 -30 1r3e:D
140 2f8s:C 22 19 0.5263 0.4545 0.5263 -30
141 3fte:D 22 19 0.5263 0.4545 0.5263 -30 3ftf:C, 3ftf:D
142 3j0l:c 17 17 0.4211 0.4706 0.4706 -30 3j0o:c
143 4v63:AV 12 12 0.4737 0.7500 0.7500 -30 4v63:CV
144 6gsj:4K 18 15 0.6842 0.7222 0.8667 -30
145 6mdz:F 17 17 0.4211 0.4706 0.4706 -30
146 6mfr:E 22 19 0.5263 0.4545 0.5263 -30
147 6ww6:E 17 17 0.4211 0.4706 0.4706 -30
148 8bdr:V 12 12 0.4737 0.7500 0.7500 -30 8be0:V, 8bf5:V, 5fmz:H, 5fmz:V, 7r1f:V, 7z4o:UUU, 7z4o:VVV, 7zpl:V, 7zpl:U
149 8fnc:m 17 17 0.4211 0.4706 0.4706 -30
150 8gna:J 17 17 0.4211 0.4706 0.4706 -30 8gu6:J
151 8jr8:E 17 17 0.4211 0.4706 0.4706 -30
152 8qg0:Q 17 17 0.4211 0.4706 0.4706 -30
153 4al6:B 16 16 0.4211 0.5000 0.5000 -31 2xli:B, 2xlj:B, 2xlk:C, 2xlk:D
154 4pwd:T 21 19 0.4737 0.4286 0.4737 -31
155 4v4z:A1 27 19 0.8421 0.5926 0.8421 -31
156 4v5k:AX 16 16 0.4211 0.5000 0.5000 -31
157 4v8d:A1 16 16 0.4211 0.5000 0.5000 -31 4v8d:C1
158 4wq1:4L 16 16 0.4211 0.5000 0.5000 -31
159 4wr6:4L 16 16 0.4211 0.5000 0.5000 -31
160 4wzd:4K 16 16 0.4211 0.5000 0.5000 -31
161 5msf:S 16 16 0.4211 0.5000 0.5000 -31
162 6bjg:D 21 19 0.4737 0.4286 0.4737 -31 6bjh:D, 6bjv:D
163 6mfr:F 16 16 0.4211 0.5000 0.5000 -31
164 6nit:E 21 19 0.4737 0.4286 0.4737 -31
165 6qcx:M 16 16 0.4211 0.5000 0.5000 -31
166 6qnq:4K 17 15 0.6316 0.7059 0.8000 -31
167 6tqa:E 21 19 0.4737 0.4286 0.4737 -31 6tqa:F, 6tqa:G, 6tqa:H
168 7swf:B 17 16 0.5789 0.6471 0.6875 -31
169 8d8n:D 21 19 0.4737 0.4286 0.4737 -31
170 8fni:m 21 19 0.4737 0.4286 0.4737 -31
171 8p0b:V 12 12 0.5789 0.9167 0.9167 -31 8p0u:V, 8z97:D, 8z9h:D, 8z9r:D
172 8w8e:P 16 16 0.4211 0.5000 0.5000 -31 8w8f:P
173 1q2r:E 20 19 0.4211 0.4000 0.4211 -32 1q2r:F, 1q2s:F
174 1r9f:B 20 19 0.4211 0.4000 0.4211 -32
175 1zdk:R 19 19 0.2632 0.2632 0.2632 -32 1zdk:S
176 2ab4:B 20 19 0.4211 0.4000 0.4211 -32
177 2b6g:B 19 19 0.2632 0.2632 0.2632 -32
178 2bq5:R 19 19 0.2632 0.2632 0.2632 -32
179 2mkn:B 19 19 0.2632 0.2632 0.2632 -32
180 3bt7:C 19 19 0.2632 0.2632 0.2632 -32 3bt7:D
181 3cz3:E 19 19 0.2632 0.2632 0.2632 -32 3cz3:G
182 4j5v:B 19 19 0.2632 0.2632 0.2632 -32
183 4l8h:R 20 19 0.4211 0.4000 0.4211 -32
184 4puo:T 20 19 0.4211 0.4000 0.4211 -32
185 4pwd:E 20 19 0.4211 0.4000 0.4211 -32
186 4rwn:B 19 19 0.2632 0.2632 0.2632 -32 4rwo:B, 4rwp:B, 4s3n:B
187 4v7b:AX 19 19 0.2632 0.2632 0.2632 -32
188 4wr6:4K 15 15 0.4211 0.5333 0.5333 -32
189 5lmq:Y 21 16 0.7368 0.6667 0.8750 -32
190 5vm9:D 15 15 0.4211 0.5333 0.5333 -32
191 5xpa:D 19 19 0.2632 0.2632 0.2632 -32
192 6mur:H 19 19 0.2632 0.2632 0.2632 -32 6o7e:H, 6o7h:H
193 6tqb:B 19 19 0.2632 0.2632 0.2632 -32
194 6zlc:C 19 19 0.2632 0.2632 0.2632 -32 6zlc:D
195 7c2k:F 20 19 0.4211 0.4000 0.4211 -32
196 7m5d:4 15 15 0.4211 0.5333 0.5333 -32
197 7nq4:C 20 19 0.4211 0.4000 0.4211 -32 1q2s:E
198 7swq:B 21 19 0.5789 0.5238 0.5789 -32
199 7y81:C 19 19 0.2632 0.2632 0.2632 -32
200 8a98:S4 19 19 0.2632 0.2632 0.2632 -32
201 8d9i:D 19 19 0.2632 0.2632 0.2632 -32
202 8h0i:X 19 19 0.2632 0.2632 0.2632 -32 8h0i:Y
203 8ifk:C 20 19 0.4211 0.4000 0.4211 -32 8ifl:C, 8ifl:H, 8ifl:L, 8ifl:P, 8ifm:C, 8ifm:H, 8ifm:L, 8ifm:P
204 8j62:X 19 19 0.2632 0.2632 0.2632 -32 8j62:Y
205 8j8h:E 20 19 0.4211 0.4000 0.4211 -32
206 8psq:S 15 15 0.4211 0.5333 0.5333 -32 8pss:S, 8pt7:S
207 8swb:B 20 19 0.4211 0.4000 0.4211 -32 8swc:B, 6vrd:B
208 8u72:U 19 19 0.2632 0.2632 0.2632 -32 8u72:M, 8u72:S, 8u72:X
209 8ves:H 19 19 0.2632 0.2632 0.2632 -32
210 9dn4:E 20 19 0.4211 0.4000 0.4211 -32 9dn4:F
211 1aq4:S 14 14 0.4211 0.5714 0.5714 -33
212 2c50:R 14 14 0.4211 0.5714 0.5714 -33
213 5lmn:Y 20 15 0.7368 0.7000 0.9333 -33 5lmp:Y, 5lms:Y, 5lmt:Y, 5lmu:Y, 5lmv:Y
214 7uzy:L 14 14 0.4211 0.5714 0.5714 -33
215 8a40:P 14 14 0.4211 0.5714 0.5714 -33
216 8cdl:Dd 14 14 0.4211 0.5714 0.5714 -33
217 8fok:P 14 14 0.4211 0.5714 0.5714 -33
218 8oze:N 20 18 0.5789 0.5500 0.6111 -33 8oze:A
219 8pid:R 14 14 0.4211 0.5714 0.5714 -33
220 8poh:V 14 14 0.4211 0.5714 0.5714 -33 8poh:U
221 2ix1:B 13 13 0.4211 0.6154 0.6154 -34
222 2qk9:B 18 18 0.3684 0.3889 0.3889 -34
223 3ola:J 18 18 0.3684 0.3889 0.3889 -34 3ola:N
224 4k4z:F 18 18 0.3684 0.3889 0.3889 -34 4k4z:J
225 4wro:4K 13 13 0.4211 0.6154 0.6154 -34
226 4wt1:4K 13 13 0.4211 0.6154 0.6154 -34
227 4wzo:4K 13 13 0.4211 0.6154 0.6154 -34
228 5gmk:B 13 13 0.4211 0.6154 0.6154 -34 5wsg:B
229 5hsw:B 18 18 0.3684 0.3889 0.3889 -34
230 6d8a:C 18 18 0.3684 0.3889 0.3889 -34 6d8a:H, 6d8f:C, 6d8f:H, 6d8p:E, 6d8p:C, 6d92:C, 6d92:H, 6d95:B, 6d95:H, 6d9k:C, 6d9k:H
231 6gbm:A 23 19 0.5263 0.4348 0.5263 -34
232 6jnx:R 18 18 0.3684 0.3889 0.3889 -34
233 6mdz:D 14 14 0.5263 0.7143 0.7143 -34 6mfr:D
234 6ogz:B 18 18 0.3684 0.3889 0.3889 -34
235 6rr7:D 14 14 0.5263 0.7143 0.7143 -34
236 6swe:4 18 18 0.3684 0.3889 0.3889 -34
237 6t0u:V 23 19 0.5263 0.4348 0.5263 -34
238 7l1f:T 18 18 0.3684 0.3889 0.3889 -34
239 7r0e:R 18 18 0.3684 0.3889 0.3889 -34
240 8g7p:v 13 13 0.4211 0.6154 0.6154 -34
241 8psz:D 14 14 0.5263 0.7143 0.7143 -34 8pt2:D, 8pth:D
242 8qpb:z 13 13 0.4211 0.6154 0.6154 -34 8r0b:z
243 8wid:b 18 18 0.3684 0.3889 0.3889 -34
244 8z85:D 13 13 0.4211 0.6154 0.6154 -34
245 1u1y:R 17 17 0.3684 0.4118 0.4118 -35
246 2bq5:S 17 17 0.3684 0.4118 0.4118 -35 2bu1:R, 2bu1:S, 2c4q:R, 2c4q:S, 2c4y:R, 2c4z:R
247 3dh3:E 22 19 0.4737 0.4091 0.4737 -35 3dh3:F, 3dh3:G, 3dh3:H
248 3dkn:E 17 17 0.3684 0.4118 0.4118 -35
249 3j0e:A 22 19 0.4737 0.4091 0.4737 -35
250 4k4s:B 17 17 0.3684 0.4118 0.4118 -35 4k4s:F
251 4k4t:B 17 17 0.3684 0.4118 0.4118 -35 4k4t:F
252 4ol8:C 17 17 0.3684 0.4118 0.4118 -35 4ol8:G
253 4v7j:Ax 12 12 0.4211 0.6667 0.6667 -35 4v7j:Bx
254 5zkj:C 12 12 0.4211 0.6667 0.6667 -35 5zkj:E
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766 4k4y:C 12 12 0.2632 0.4167 0.4167 -50 4k4y:G, 4k4y:K, 4k4y:O
767 4ngb:B 12 12 0.2632 0.4167 0.4167 -50 4ngd:B
768 4ngc:B 12 12 0.2632 0.4167 0.4167 -50
769 4v99:AD 17 17 0.2105 0.2353 0.2353 -50 4v99:AI, 4v99:AN, 4v99:AS, 4v99:AX, 4v99:Ac, 4v99:Ah, 4v99:Am, 4v99:Ar, 4v99:Aw, 4v99:A2, 4v99:A7, 4v99:BD, 4v99:BI, 4v99:BN, 4v99:BS, 4v99:BX, 4v99:Bc, 4v99:Bh, 4v99:Bm, 4v99:Br, 4v99:Bw, 4v99:B2, 4v99:B7, 4v99:CD, 4v99:CI, 4v99:CN, 4v99:CS, 4v99:CX, 4v99:Cc, 4v99:Ch, 4v99:Cm, 4v99:Cr, 4v99:Cw, 4v99:C2, 4v99:C7, 4v99:DD, 4v99:DI, 4v99:DN, 4v99:DS, 4v99:DX, 4v99:Dc, 4v99:Dh, 4v99:Dm, 4v99:Dr, 4v99:Dw, 4v99:D2, 4v99:D7, 4v99:ED, 4v99:EI, 4v99:EN, 4v99:ES, 4v99:EX, 4v99:Ec, 4v99:Eh, 4v99:Em, 4v99:Er, 4v99:Ew, 4v99:E2, 4v99:E7, 4v99:FD, 4v99:FI, 4v99:FN, 4v99:FS, 4v99:FX, 4v99:Fc, 4v99:Fh, 4v99:Fm, 4v99:Fr, 4v99:Fw, 4v99:F2, 4v99:F7, 4v99:GD, 4v99:GI, 4v99:GN, 4v99:GS, 4v99:GX, 4v99:Gc, 4v99:Gh, 4v99:Gm, 4v99:Gr, 4v99:Gw, 4v99:G2, 4v99:G7, 4v99:HD, 4v99:HI, 4v99:HN, 4v99:HS, 4v99:HX, 4v99:Hc, 4v99:Hh, 4v99:Hm, 4v99:Hr, 4v99:Hw, 4v99:H2, 4v99:H7, 4v99:ID, 4v99:II, 4v99:IN, 4v99:IS, 4v99:IX, 4v99:Ic, 4v99:Ih, 4v99:Im, 4v99:Ir, 4v99:Iw, 4v99:I2, 4v99:I7, 4v99:JD, 4v99:JI, 4v99:JN, 4v99:JS, 4v99:JX, 4v99:Jc, 4v99:Jh, 4v99:Jm, 4v99:Jr, 4v99:Jw, 4v99:J2, 4v99:J7
770 5e3h:C 12 12 0.2632 0.4167 0.4167 -50
771 6alf:R 12 12 0.2632 0.4167 0.4167 -50 6j9e:I, 6j9f:I
772 6fq3:B 13 13 0.3684 0.5385 0.5385 -50
773 6gpg:C 13 13 0.3684 0.5385 0.5385 -50
774 6q8y:l 17 17 0.2105 0.2353 0.2353 -50
775 6sjd:D 17 17 0.2105 0.2353 0.2353 -50
776 6ww6:F 17 17 0.2105 0.2353 0.2353 -50 6ww6:D
777 6z6g:H 13 13 0.3684 0.5385 0.5385 -50
778 6zj3:S5 12 12 0.2632 0.4167 0.4167 -50
779 7c2k:G 12 12 0.2632 0.4167 0.4167 -50
780 7l1f:P 17 17 0.2105 0.2353 0.2353 -50
781 7ori:P 12 12 0.2632 0.4167 0.4167 -50
782 7qi4:Aw 22 19 0.3158 0.2727 0.3158 -50
783 7to1:B 22 19 0.3158 0.2727 0.3158 -50
784 7xd9:E 13 13 0.3684 0.5385 0.5385 -50
785 8as7:T 17 17 0.2105 0.2353 0.2353 -50 8r6u:T, 8r6w:T
786 8bdr:R 12 12 0.2632 0.4167 0.4167 -50
787 8be0:R 12 12 0.2632 0.4167 0.4167 -50
788 8bek:M 17 17 0.2105 0.2353 0.2353 -50
789 8bf5:R 12 12 0.2632 0.4167 0.4167 -50
790 8fiz:AW 17 17 0.2105 0.2353 0.2353 -50
791 8g5n:R 17 17 0.2105 0.2353 0.2353 -50 8g5o:R, 8g5p:R
792 8hra:K 17 17 0.2105 0.2353 0.2353 -50 8hra:L, 8hra:M, 8hrb:V, 8hrb:Z, 8hrb:X, 8hrb:W, 8hrb:Y, 8hrb:a
793 8j9g:E 12 12 0.2632 0.4167 0.4167 -50
794 8p2f:b 8 8 0.4211 1.0000 1.0000 -50 4v5k:CX
795 8rbx:P 17 17 0.2105 0.2353 0.2353 -50
796 8sfh:B 27 19 0.5263 0.3704 0.5263 -50
797 8sqj:O 17 17 0.2105 0.2353 0.2353 -50
798 8syi:R 17 17 0.2105 0.2353 0.2353 -50
799 1k8w:B 22 19 0.4211 0.3636 0.4211 -51 1zl3:B
800 2asb:B 11 11 0.2632 0.4545 0.4545 -51
801 2bs0:R 12 12 0.3684 0.5833 0.5833 -51
802 2bs1:R 12 12 0.3684 0.5833 0.5833 -51 1zse:R
803 2f8k:B 16 16 0.2105 0.2500 0.2500 -51
804 2f8t:C 26 19 0.4737 0.3462 0.4737 -51
805 2o5i:H 16 16 0.2105 0.2500 0.2500 -51 2o5i:Y, 2o5j:H, 2o5j:Y, 2ppb:H, 2ppb:Y
806 3f73:Y 11 11 0.2632 0.4545 0.4545 -51
807 3gtg:R 12 12 0.3684 0.5833 0.5833 -51 3gtj:R, 3gtm:M, 3gto:R
808 3nmu:K 12 12 0.3684 0.5833 0.5833 -51
809 3qjl:X 12 12 0.3684 0.5833 0.5833 -51 3qjl:R
810 4tua:XX 11 11 0.2632 0.4545 0.4545 -51 4tuc:QX
811 4v5h:AX 11 11 0.2632 0.4545 0.4545 -51
812 4v7e:Af 11 11 0.2632 0.4545 0.4545 -51
813 4w5t:B 16 16 0.2105 0.2500 0.2500 -51
814 5jaj:X 11 11 0.2632 0.4545 0.4545 -51 5jb2:X
815 5n8l:B 21 19 0.2632 0.2381 0.2632 -51 5n8m:B
816 5oc6:B 11 11 0.2632 0.4545 0.4545 -51 5oc6:C, 1yz9:C, 1yz9:D, 1yz9:E, 1yz9:F
817 5wty:C 11 11 0.2632 0.4545 0.4545 -51 5wty:D, 5wzh:B, 5wzk:B
818 5zw4:D 16 16 0.2105 0.2500 0.2500 -51
819 6c6k:E 11 11 0.2632 0.4545 0.4545 -51 6c6k:F
820 6ir9:P 16 16 0.2105 0.2500 0.2500 -51 6j4z:P, 6j50:P
821 6j4w:P 16 16 0.2105 0.2500 0.2500 -51
822 6ozp:C 12 12 0.3684 0.5833 0.5833 -51 6ozp:D, 6ozs:C, 6ozs:D
823 6z6b:CCC 16 16 0.2105 0.2500 0.2500 -51 6z6b:HHH
824 7dfg:P 12 12 0.3684 0.5833 0.5833 -51 7doi:P
825 7ki3:F 21 19 0.2632 0.2381 0.2632 -51
826 7kx9:C 16 16 0.2105 0.2500 0.2500 -51
827 7n1p:mR 27 19 0.6316 0.4444 0.6316 -51
828 7nkx:P 16 16 0.2105 0.2500 0.2500 -51
829 7nky:P 16 16 0.2105 0.2500 0.2500 -51
830 7orm:T 11 11 0.2632 0.4545 0.4545 -51 7oro:T, 6z8k:H
831 7qde:A 11 11 0.2632 0.4545 0.4545 -51
832 7qp7:7 21 19 0.2632 0.2381 0.2632 -51
833 7rdq:I 11 11 0.2632 0.4545 0.4545 -51
834 7sva:B 11 11 0.2632 0.4545 0.4545 -51
835 7tnx:B 12 12 0.3684 0.5833 0.5833 -51
836 7uu5:N 11 11 0.2632 0.4545 0.4545 -51
837 7w0f:D 21 19 0.2632 0.2381 0.2632 -51
838 7xd8:B 12 12 0.3684 0.5833 0.5833 -51 7xd8:K, 7xd8:N, 7xd9:B, 7xd9:H, 7xd9:Q
839 7yed:M 21 19 0.2632 0.2381 0.2632 -51
840 8a3l:X 6 6 0.3158 1.0000 1.0000 -51
841 8asd:P 11 11 0.2632 0.4545 0.4545 -51
842 8ci5:C 11 11 0.2632 0.4545 0.4545 -51
843 8d96:E 12 12 0.3684 0.5833 0.5833 -51 8d9d:E
844 8dvr:B 21 19 0.2632 0.2381 0.2632 -51
845 8eg8:R 12 12 0.3684 0.5833 0.5833 -51
846 8fzg:z 11 11 0.2632 0.4545 0.4545 -51 8fzh:z
847 8r0s:C 17 16 0.3684 0.4118 0.4375 -51
848 8wau:Z 11 11 0.2632 0.4545 0.4545 -51
849 1s77:R 10 10 0.2632 0.5000 0.5000 -52
850 1sds:D 15 15 0.2105 0.2667 0.2667 -52 1sds:E, 1sds:F
851 2nug:C 11 11 0.3684 0.6364 0.6364 -52 2nug:D
852 2y8w:B 20 19 0.2105 0.2000 0.2105 -52
853 3adi:E 10 10 0.2632 0.5000 0.5000 -52
854 3gtq:R 11 11 0.3684 0.6364 0.6364 -52
855 3zc0:M 15 15 0.2105 0.2667 0.2667 -52 3zc0:N, 3zc0:O
856 4tub:XX 10 10 0.2632 0.5000 0.5000 -52
857 4tux:C 25 19 0.4211 0.3200 0.4211 -52
858 4v5c:AX 10 10 0.2632 0.5000 0.5000 -52 4v5c:CX, 4v8j:CX
859 5amq:C 10 10 0.2632 0.5000 0.5000 -52
860 5f5f:B 20 19 0.2105 0.2000 0.2105 -52 5f5f:D, 5f5f:F, 5f5f:H
861 5gap:U 20 19 0.2105 0.2000 0.2105 -52
862 5jaj:Y 10 10 0.2632 0.5000 0.5000 -52 5jb2:Y, 5jc3:X, 5jc3:Y, 5jc3:C, 5jc3:D, 5jcf:X, 5jcf:C, 5jcf:D, 5jch:X, 5jch:Y, 5jch:U, 5jch:V
863 5jcf:Y 11 11 0.3684 0.6364 0.6364 -52
864 5ot2:P 10 10 0.2632 0.5000 0.5000 -52
865 5w0o:C 15 15 0.2105 0.2667 0.2667 -52 5w0o:D
866 5w6v:R 10 10 0.2632 0.5000 0.5000 -52
867 5wwe:B 10 10 0.2632 0.5000 0.5000 -52
868 5wzi:B 11 11 0.3684 0.6364 0.6364 -52
869 6alg:R 10 10 0.2632 0.5000 0.5000 -52 6alh:R, 8e82:R, 8e95:R, 8fvr:C, 8fvw:C, 8k58:J, 8k5a:J, 6m6c:R, 7n4e:R, 7uwe:R, 7uwh:R, 6x43:R, 6x4y:R, 6xav:R
870 6bsg:R 25 19 0.4211 0.3200 0.4211 -52 6bsh:R
871 6bsi:R 25 19 0.4211 0.3200 0.4211 -52
872 6gkh:X 15 15 0.2105 0.2667 0.2667 -52 7nic:X
873 6lsh:B 10 10 0.2632 0.5000 0.5000 -52
874 6rh3:R 10 10 0.2632 0.5000 0.5000 -52 6ri7:R
875 6xki:B 10 10 0.2632 0.5000 0.5000 -52 5zc9:B
876 7aoh:P 10 10 0.2632 0.5000 0.5000 -52
877 7cxm:J 26 19 0.5789 0.4231 0.5789 -52 7cxn:J, 8gw1:J, 8gwk:J, 8gwm:J
878 7msf:S 11 11 0.3684 0.6364 0.6364 -52
879 7n0c:T 25 19 0.4211 0.3200 0.4211 -52
880 7n2u:mR 11 11 0.3684 0.6364 0.6364 -52
881 7ori:H 11 11 0.3684 0.6364 0.6364 -52
882 7pyk:R 10 10 0.2632 0.5000 0.5000 -52
883 7uu5:M 11 11 0.3684 0.6364 0.6364 -52
884 7vpx:K 10 10 0.2632 0.5000 0.5000 -52
885 7w0f:F 26 19 0.5789 0.4231 0.5789 -52
886 7yfq:B 25 19 0.4211 0.3200 0.4211 -52
887 7zvn:C 10 10 0.2632 0.5000 0.5000 -52
888 8be0:M 20 19 0.2105 0.2000 0.2105 -52
889 8bf7:3 10 10 0.2632 0.5000 0.5000 -52 8bh4:3, 8bhn:3
890 8e2a:B 15 15 0.2105 0.2667 0.2667 -52
891 8e40:r 25 19 0.4211 0.3200 0.4211 -52
892 8egb:R 11 11 0.3684 0.6364 0.6364 -52
893 8g61:mR 10 10 0.2632 0.5000 0.5000 -52
894 8swb:D 20 19 0.2105 0.2000 0.2105 -52 6vrd:C
895 8swc:C 20 19 0.1579 0.1500 0.1579 -52
896 8z9q:D 10 10 0.2632 0.5000 0.5000 -52 8z9r:G, 8z9r:K
897 1a1t:B 20 18 0.3684 0.3500 0.3889 -53
898 2bx2:R 14 14 0.2105 0.2857 0.2857 -53
899 3avx:G 9 9 0.2632 0.5556 0.5556 -53
900 3hxm:Y 9 9 0.2632 0.5556 0.5556 -53
901 3j0l:4 14 14 0.2105 0.2857 0.2857 -53
902 3k5z:B 9 9 0.2632 0.5556 0.5556 -53
903 3k64:B 9 9 0.2632 0.5556 0.5556 -53
904 3nvi:E 24 19 0.3684 0.2917 0.3684 -53 3nvi:F
905 3qg9:B 9 9 0.2632 0.5556 0.5556 -53 3qgc:B
906 4jnx:B 20 18 0.3684 0.3500 0.3889 -53 4jnx:G
907 4lg2:F 9 9 0.2632 0.5556 0.5556 -53
908 4pjo:X 10 10 0.3684 0.7000 0.7000 -53 4pjo:x, 4pjo:Y, 4pjo:y
909 4q0b:E 9 9 0.2632 0.5556 0.5556 -53
910 4v7p:DX 9 9 0.2632 0.5556 0.5556 -53
911 4z31:C 14 14 0.2105 0.2857 0.2857 -53
912 4zlr:C 14 14 0.2105 0.2857 0.2857 -53
913 5do4:A 25 19 0.5263 0.4000 0.5263 -53
914 5jc7:X 24 19 0.3684 0.2917 0.3684 -53
915 5n9g:E 25 19 0.4737 0.3600 0.4737 -53 5n9g:J
916 5w4u:R 9 9 0.2632 0.5556 0.5556 -53 5w51:R, 4y52:R, 4y7n:R
917 5wsg:b 14 14 0.2105 0.2857 0.2857 -53
918 5y6z:B 15 15 0.3158 0.4000 0.4000 -53
919 6by1:AX 30 19 0.7368 0.4667 0.7368 -53 6by1:BX
920 6een:F 9 9 0.2632 0.5556 0.5556 -53
921 6mus:H 25 19 0.5263 0.4000 0.5263 -53
922 6mut:G 20 17 0.4211 0.4000 0.4706 -53
923 6qx3:D 10 10 0.3684 0.7000 0.7000 -53
924 6szv:M 9 9 0.2632 0.5556 0.5556 -53
925 6z6b:BBB 10 10 0.3684 0.7000 0.7000 -53 6z6b:UUU, 6z6g:U, 6z8k:C, 6z8k:T
926 7a5g:i4 10 10 0.3684 0.7000 0.7000 -53
927 7bkp:X 14 14 0.2105 0.2857 0.2857 -53 6g19:X, 6gjz:X, 6gkm:X
928 7bkp:Z 14 14 0.2105 0.2857 0.2857 -53 6g19:Y, 6gjz:Y, 6gkm:Y
929 7c7a:R 9 9 0.2632 0.5556 0.5556 -53
930 7ojn:M 9 9 0.2632 0.5556 0.5556 -53
931 7oro:P 9 9 0.2632 0.5556 0.5556 -53
932 7swq:D 14 14 0.2105 0.2857 0.2857 -53
933 7ug7:mR 10 10 0.3684 0.7000 0.7000 -53
934 7xpl:H 25 19 0.5263 0.4000 0.5263 -53
935 7yfx:B 15 14 0.3684 0.4667 0.5000 -53
936 7zw0:sm 29 19 0.5789 0.3793 0.5789 -53
937 8c4v:P 9 9 0.2632 0.5556 0.5556 -53
938 8eoe:R 15 15 0.3158 0.4000 0.4000 -53
939 8fiy:R 9 9 0.2632 0.5556 0.5556 -53
940 8in8:I 24 19 0.3684 0.2917 0.3684 -53
941 8oin:AI 9 9 0.2632 0.5556 0.5556 -53 8oip:AI
942 8pbl:R 14 14 0.2105 0.2857 0.2857 -53
943 8r3k:M 10 10 0.3684 0.7000 0.7000 -53
944 9fmd:EX 14 14 0.2105 0.2857 0.2857 -53 6qdv:E
945 1m8w:E 8 8 0.2632 0.6250 0.6250 -54
946 1tfw:H 13 13 0.2105 0.3077 0.3077 -54 1tfw:I, 1tfw:G
947 2jlx:C 8 8 0.2632 0.6250 0.6250 -54 2jlx:D
948 2m8d:A 8 8 0.2632 0.6250 0.6250 -54
949 2om7:D 13 13 0.2105 0.3077 0.3077 -54
950 2qkk:X 13 13 0.2105 0.3077 0.3077 -54
951 2y9h:N 18 18 0.1579 0.1667 0.1667 -54 2y9h:P
952 3agv:U 24 19 0.4737 0.3750 0.4737 -54
953 3e3j:R 8 8 0.2632 0.6250 0.6250 -54 3e3j:Z
954 3hm9:Y 13 13 0.2105 0.3077 0.3077 -54
955 3j0e:C 13 13 0.2105 0.3077 0.3077 -54
956 3jb9:Q 13 13 0.2105 0.3077 0.3077 -54
957 3s16:R 8 8 0.2632 0.6250 0.6250 -54
958 4a2x:M 14 14 0.3158 0.4286 0.4286 -54 4a2x:O
959 4ang:R 14 12 0.4211 0.5714 0.6667 -54
960 4fvu:B 8 8 0.2632 0.6250 0.6250 -54
961 4k4s:C 13 13 0.2105 0.3077 0.3077 -54 4k4s:G
962 4k4v:B 13 13 0.2105 0.3077 0.3077 -54 4k4v:F
963 4k4x:C 13 13 0.2105 0.3077 0.3077 -54 4k4x:G, 4k4x:K, 4k4x:O, 4k4z:C, 4k4z:G, 4k4z:K, 4k4z:O
964 4kzz:k 13 13 0.2105 0.3077 0.3077 -54
965 4p70:XX 8 8 0.2632 0.6250 0.6250 -54
966 4z7k:C 25 19 0.6316 0.4800 0.6316 -54
967 5ed1:C 23 19 0.3158 0.2609 0.3158 -54 5hp3:C
968 5h1k:C 13 13 0.2105 0.3077 0.3077 -54
969 5hp2:C 23 19 0.3158 0.2609 0.3158 -54
970 5j30:XX 9 9 0.3684 0.7778 0.7778 -54 5j3c:QX
971 5jbg:X 23 19 0.3158 0.2609 0.3158 -54
972 5udz:V 24 19 0.4737 0.3750 0.4737 -54
973 6evj:R 13 13 0.2105 0.3077 0.3077 -54 6evj:S, 6evk:R, 6fhh:R, 6fhi:R, 5m3h:R, 4wsb:R
974 6gsn:3 14 14 0.3158 0.4286 0.4286 -54 3jap:3
975 6h9h:D 23 19 0.3158 0.2609 0.3158 -54
976 6n4o:D 14 14 0.3158 0.4286 0.4286 -54
977 6nud:U 28 19 0.5263 0.3571 0.5263 -54
978 6ovr:I 8 8 0.2632 0.6250 0.6250 -54 5vo8:I
979 6xa1:k 13 13 0.2105 0.3077 0.3077 -54
980 6xas:R 18 18 0.1579 0.1667 0.1667 -54
981 6xmg:E 24 19 0.4737 0.3750 0.4737 -54
982 6zqg:D4 23 19 0.3158 0.2609 0.3158 -54
983 7cgf:B 8 8 0.2632 0.6250 0.6250 -54 7cgj:B, 3q0m:C, 3q0m:D, 3q0r:B
984 7ojl:E 13 13 0.2105 0.3077 0.3077 -54
985 7qgh:x 14 14 0.3158 0.4286 0.4286 -54
986 7r9f:B 13 13 0.2105 0.3077 0.3077 -54
987 8asb:T 18 18 0.1579 0.1667 0.1667 -54
988 8bf5:M 13 13 0.2105 0.3077 0.3077 -54
989 8cx2:L 9 9 0.3684 0.7778 0.7778 -54
990 8h69:3 18 18 0.1579 0.1667 0.1667 -54
991 8s51:P 8 8 0.2632 0.6250 0.6250 -54
992 8wb0:Z 13 13 0.2105 0.3077 0.3077 -54
993 8y6o:A 13 13 0.2105 0.3077 0.3077 -54
994 9cg7:X 9 9 0.3684 0.7778 0.7778 -54
995 1aq3:S 12 12 0.2105 0.3333 0.3333 -55
996 1dz5:C 22 19 0.2632 0.2273 0.2632 -55 1dz5:D
997 1fje:A 22 19 0.2632 0.2273 0.2632 -55
998 1m8w:F 7 7 0.2632 0.7143 0.7143 -55
999 1tfw:F 12 12 0.2105 0.3333 0.3333 -55
1000 1wsu:E 22 19 0.2632 0.2273 0.2632 -55 1wsu:F

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218