>rna
accagguugauucugccugacguggaugcuagucucauagauuuagccaugcauguguaagcgaagcgauuagugaagcg
gcggaaggcucaguaacgggcgaguauuuaaucucuagaaccggacaaccucaggaaacagaggggaaaacggaguaaga
gcauguguuagcaugugaugagaacaacagugcaggagaguaagaagccaucccaucaguuaguaaguaggguaagggcc
uauuuagacguagacggguacgggggauuaggguuugauuccggagagggagccugagagacggcuaccagguccaagga
cagcagcaggcgcgaaaauuaccgaagccuccaagagggcgguagugaagagacgugaaaacaaguguguguaaaaacca
caugaguaacuggaggucaaggcuggugccagcauccgcgguaauaccagcuccaggagugucuaugaugauugcugcga
uuaaaagguccguagucgaagaacaguacuuguuuguaauguggcuuaucgagagccgaauagaacgagaagaguucaga
guaaggagcgaaggagggcuagauuauugagcagcgagaggugaaauuugaugaccugcuuaggaguaacagaggcgaaa
gcgcuagucaagaacgaauccgaugaucaaggacguaggcuggaggaucgaagacgauuagagaccguaguaguuccagc
aguaaacgaugccuacgcuguugugguuaugagcacggcagaagagaaaucuaguagggcuuuggggagaguacgcgcgc
aagcgauaaauuuaaaggaaauugacggaagaacaccacaaggaguggagugugcggcuuaauuugacucaacgcgggac
agcuuaccauacccgauggccgugugagcguaguacgcgauaggucagagaguggugcauggccguuaacgacgaguggg
gugaccuuuggguuaaguccgcgaaguagugagaucccuaggauacgaaaguuaucgacagguguuaaaaacacaggaag
gaaggggcaagaacaggucagugaugcccuuagaugguaugggcugcacgcgcacuacaguggucacagcagaaacaaau
agaaguaaaugugaucgagagggaaugagcacuguaaugugcacaggaacgaggaauugcuaguaaucguuaucucauua
agaagcgaugaaugugucccuguucuuuguacacaccgcccgucguuaucgaagauggaaccaggugcgaacaagugaaa
gcgagugagugcaggguucuagaucugauacaagucguaacaaggcagcuguaggagaaccuguagcuggauca

The query sequence (length=1354) is searched through a non-redundant set of database sequences rna_nr.fasta.gz clustered at 100% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	8p5d:S60	1354	1354	1.0000	1.0000	1.0000	0.0	8p60:S60, 8p60:R60, 7qca:S60
2	7qep:3	1295	695	0.3781	0.3954	0.7367	7.71e-60
3	7qep:3	1295	53	0.0340	0.0355	0.8679	2.98e-09
4	6zu5:S60	1336	237	0.1425	0.1445	0.8143	4.71e-47
5	6zu5:S60	1336	93	0.0547	0.0554	0.7957	6.40e-11
6	6zj3:S1	2024	89	0.0561	0.0375	0.8539	1.06e-18
7	6rm3:S60	1231	91	0.0569	0.0626	0.8462	3.80e-18

[Back]