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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
YTEDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVRERLSEKLERDPRDSEWAEAVQLPLPAFRYRLHIGRRAKD
KMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLY
ETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDGETPEDQVSKN
LLREDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSVLKEYIR

The query sequence (length=314) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8h3v:G 314 314 1.0000 1.0000 1.0000 0.0 8h40:G
2 8gzg:F 314 314 0.8885 0.8885 0.8885 0.0 8gzh:F
3 7ckq:F 272 311 0.5414 0.6250 0.5466 1.86e-112 7f75:F, 8x6f:E
4 6bzo:F 326 317 0.5350 0.5153 0.5300 2.03e-110 6c04:F, 6cce:F, 6ccv:F, 6dcf:F, 6edt:F, 6ee8:F, 6eec:F, 6fbv:F, 8hih:F, 7kif:F, 7kim:F, 7kin:F, 6m7j:F, 6ono:B, 6ono:D, 6onu:B, 6onu:D, 6onu:F, 6onu:H, 7p5x:AF, 5tw1:F, 7u22:F, 5uh5:F, 5uh6:F, 5uh8:F, 5uh9:F, 5uha:F, 5uhb:F, 5uhc:F, 5uhd:F, 5uhe:F, 5uhf:F, 5uhg:F, 5vi5:F, 5vi8:F, 6vvs:F, 6vvt:F, 6vvv:F, 6vvx:F, 6vvy:F, 6vvz:F, 6vw0:F
5 7l7b:F 272 313 0.5414 0.6250 0.5431 1.32e-107
6 8k60:F 315 316 0.5096 0.5079 0.5063 1.18e-106 8dy7:F, 8dy9:F, 8hvr:F, 8jke:F, 7vpd:F, 7vpz:F, 7x74:F, 7x75:F, 7x76:F
7 6n60:F 318 318 0.5159 0.5094 0.5094 2.85e-106 8igr:L, 8igs:L
8 8u3b:F 431 248 0.4682 0.3411 0.5927 3.99e-98
9 8u3b:F 431 32 0.0414 0.0302 0.4062 0.31
10 3iyd:F 479 248 0.4682 0.3069 0.5927 1.43e-97
11 7ye1:F 497 240 0.4586 0.2897 0.6000 1.29e-96 7ye2:F, 5yix:A
12 7ye1:F 497 30 0.0414 0.0262 0.4333 0.57 7ye2:F, 5yix:A
13 6psr:L 548 248 0.4682 0.2682 0.5927 1.45e-96 6n58:L, 6n61:F
14 6psr:L 548 32 0.0414 0.0237 0.4062 0.31 6n58:L, 6n61:F
15 4kn7:X 517 245 0.4682 0.2843 0.6000 4.64e-96
16 4kn7:X 517 30 0.0382 0.0232 0.4000 0.78
17 7rdq:F 349 346 0.5541 0.4986 0.5029 3.16e-91 2a68:F, 2a68:P, 2a69:F, 2a69:P, 6cuu:F, 5d4c:F, 5d4c:P, 5d4d:F, 5d4d:P, 5d4e:F, 5d4e:P, 5e17:F, 5e18:F, 7eh0:F, 7eh1:F, 7eh2:F, 7eh2:P, 4g7h:F, 4g7h:P, 4g7o:F, 4g7o:P, 4g7z:F, 4g7z:P, 5i2d:F, 5i2d:Q, 1iw7:F, 1iw7:P, 4ki2:A, 4ki2:B, 6kqd:F, 6kqd:P, 6kqe:F, 6kqf:F, 6kqg:F, 6kqh:F, 6kql:F, 6kqm:F, 6kqn:F, 1ku7:A, 6l74:F, 6lts:F, 7mlb:F, 7mli:F, 7mlj:F, 3n97:A, 4oin:F, 4oio:F, 4oip:F, 4oiq:F, 4oir:F, 6ovr:F, 6ovy:F, 6ow3:F, 6oy5:F, 6oy6:F, 6oy7:F, 6p70:F, 6p71:F, 4q4z:F, 4q5s:F, 1rio:H, 1smy:F, 5tjg:F, 3ugo:A, 3ugp:A, 5vo8:F, 5voi:F, 8w8n:F, 8w8o:F, 8w8p:F, 6wox:F, 6woy:F, 5x21:F, 5x22:F, 5x22:P, 4xln:F, 4xln:L, 4xlp:F, 4xlp:L, 4xlq:F, 4xlq:L, 4xlr:F, 4xlr:L, 4xls:F, 4xls:L
18 6n4c:F 558 248 0.4522 0.2545 0.5726 1.22e-88 8ad1:F, 6b6h:F, 7bef:F, 7beg:F, 7c17:F, 7c97:F, 6ca0:F, 7chw:F, 7dy6:F, 8ftd:L, 6jnx:F, 8jo2:F, 6k4y:F, 7khb:F, 7khc:F, 7khe:F, 7khi:F, 6ldi:F, 7mkd:L, 7mke:L, 7mki:L, 7mkj:L, 7n4e:F, 6n57:L, 6n62:F, 6oul:L, 6p18:F, 2p7v:B, 6pb4:F, 6pb5:F, 6pb6:F, 6psq:L, 6pss:L, 6pst:L, 6psu:L, 6psv:L, 6psw:L, 7szj:F, 8to1:L, 8to6:L, 8to8:L, 8toe:L, 8tom:L, 5vt0:L, 7vwy:F, 7vwz:F, 7w5w:F, 7w5x:F, 7w5y:F, 6wmu:F, 6xh7:F, 6xh8:F, 6xl5:F, 6xl9:F, 6xlj:F, 6xll:F, 8y6u:F, 4yln:F, 4yln:L, 4yln:R, 4ylo:F, 4ylo:L, 4ylo:R, 4ylp:F, 4ylp:L, 4ylp:R
19 6n4c:F 558 32 0.0414 0.0233 0.4062 0.30 8ad1:F, 6b6h:F, 7bef:F, 7beg:F, 7c17:F, 7c97:F, 6ca0:F, 7chw:F, 7dy6:F, 8ftd:L, 6jnx:F, 8jo2:F, 6k4y:F, 7khb:F, 7khc:F, 7khe:F, 7khi:F, 6ldi:F, 7mkd:L, 7mke:L, 7mki:L, 7mkj:L, 7n4e:F, 6n57:L, 6n62:F, 6oul:L, 6p18:F, 2p7v:B, 6pb4:F, 6pb5:F, 6pb6:F, 6psq:L, 6pss:L, 6pst:L, 6psu:L, 6psv:L, 6psw:L, 7szj:F, 8to1:L, 8to6:L, 8to8:L, 8toe:L, 8tom:L, 5vt0:L, 7vwy:F, 7vwz:F, 7w5w:F, 7w5x:F, 7w5y:F, 6wmu:F, 6xh7:F, 6xh8:F, 6xl5:F, 6xl9:F, 6xlj:F, 6xll:F, 8y6u:F, 4yln:F, 4yln:L, 4yln:R, 4ylo:F, 4ylo:L, 4ylo:R, 4ylp:F, 4ylp:L, 4ylp:R
20 6wmr:Z 470 240 0.4172 0.2787 0.5458 7.00e-85 6wmt:Z
21 6omf:F 278 299 0.3662 0.4137 0.3846 1.78e-61 5ipl:F, 5ipm:F, 5ipn:F, 6kj6:F, 6utv:FFF, 6utw:FFF, 6utx:FFF, 6uty:FFF, 6utz:FFF, 6uu0:FFF, 6uu1:FFF, 6uu2:FFF, 6uu3:FFF, 6uu4:FFF, 6uu5:FFF, 6uu6:FFF, 6uu7:FFF, 6uu8:FFF, 6uu9:FFF, 6uua:FFF, 6uub:FFF, 6uuc:FFF
22 7f0r:F 278 299 0.3694 0.4173 0.3880 7.38e-61
23 7ubm:F 353 139 0.2197 0.1955 0.4964 1.21e-34 7ubn:F
24 7ubm:F 353 53 0.1051 0.0935 0.6226 3.03e-12 7ubn:F
25 7ubm:F 353 32 0.0414 0.0368 0.4062 0.28 7ubn:F
26 7xya:F 302 76 0.1752 0.1821 0.7237 3.12e-34
27 7xya:F 302 30 0.0414 0.0430 0.4333 0.37
28 8cwr:B 109 76 0.1433 0.4128 0.5921 2.81e-25 8cwt:B, 8cwt:D, 8cwt:F, 8cyf:B, 7kuf:B
29 8hkc:E 262 235 0.2070 0.2481 0.2766 1.92e-21
30 8x6g:H 244 228 0.2006 0.2582 0.2763 4.69e-15
31 6pmi:F 239 203 0.1815 0.2385 0.2808 1.13e-14 6pmj:F
32 6pfv:G 223 199 0.1847 0.2601 0.2915 1.03e-13 6pfj:A, 6pfv:A, 6pfv:D
33 6ido:A 86 60 0.0764 0.2791 0.4000 6.83e-07 6ido:B
34 2xkb:C 389 80 0.0924 0.0746 0.3625 0.21 2xkb:L
35 7phw:E 226 63 0.0732 0.1018 0.3651 0.57 7phw:B, 7pi3:F, 7pi3:M, 7pi3:T, 7pi3:a
36 7lq4:A 192 62 0.0764 0.1250 0.3871 1.1
37 7lq4:A 192 70 0.0796 0.1302 0.3571 1.5
38 3uva:C 405 68 0.0701 0.0543 0.3235 1.3 3uu0:A, 3uu0:B, 3uu0:C, 3uu0:D, 3uva:A, 3uva:B, 3uva:D, 3uxi:A
39 8cpl:C 499 70 0.0701 0.0441 0.3143 1.9 8cpl:A, 8cpl:B, 8cpl:D, 1lp1:B, 4uox:A, 4uox:B, 4uox:C, 4uox:D, 4uoy:A, 4uoy:B, 4uoy:C, 4uoy:D
40 8qxc:H 221 41 0.0541 0.0769 0.4146 2.4 8qxc:A
41 4qww:D 225 45 0.0573 0.0800 0.4000 2.8 4qww:F, 3sge:H, 3sge:J
42 6dzs:A 431 62 0.0510 0.0371 0.2581 4.8 6dzs:B, 6dzs:C, 6dzs:D
43 7vt2:A 169 80 0.0732 0.1361 0.2875 4.9 7vt2:S, 7vt2:I, 7vt2:O, 7vt2:V, 7vt2:C, 7vt2:Q, 7vt2:U, 7vt2:a, 7vt2:c, 7vt2:d, 7vt2:e, 7vt2:f, 7vt2:g, 7vt2:i, 7vt2:j, 7vt2:k, 7vt2:l, 7vt2:m, 7vt2:o, 7vt2:q, 7vt2:w, 7vt2:s, 7vt2:v, 7vt2:B, 7vt2:D, 7vt2:E, 7vt2:F, 7vt2:H, 7vt2:J, 7vt2:K, 7vt2:L, 7vt2:M, 7vt2:N, 7vt2:P, 7vt2:R, 7vt2:T, 7vt2:W, 7vt2:X, 7vt2:Z, 7vt2:b, 7vt2:h, 7vt2:n, 7vt2:p, 7vt2:r, 7vt2:t, 7vt2:u, 7vt2:x, 8w91:b, 8w93:b, 8w94:b, 8w95:b
44 5xt2:B 204 52 0.0637 0.0980 0.3846 5.2 5xt2:A, 5xt2:C, 5xt2:D, 5xt2:E
45 6db6:H 226 16 0.0318 0.0442 0.6250 5.3
46 8i23:F 230 35 0.0478 0.0652 0.4286 6.5
47 4odt:H 226 45 0.0573 0.0796 0.4000 7.0 1cbv:H, 2hkf:H, 4z8f:H
48 6azm:D 225 45 0.0573 0.0800 0.4000 7.7 6azm:B, 8b9v:H, 5csz:H, 5csz:A, 5fgb:C, 5fgb:E, 3gjf:H, 3gjf:M, 3hae:H, 3hae:I, 3hae:O, 3hae:T, 5ifj:A, 5ifj:D, 5ifj:G, 5ifj:J, 5ig7:A, 5ig7:D, 5ig7:G, 5ig7:J, 6jjp:A, 6jjp:D, 3kdm:H, 3kdm:B, 7sjs:H, 3so3:C, 4xxd:B, 4xxd:E
49 5jhf:F 405 82 0.0732 0.0568 0.2805 8.7 5jhf:C, 4p1w:C

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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