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BioLiP
>protein
YLGSTTNQIMVLSTFLPLVAGRFGLAPTSTRHTNQSGIKLLPAEKSAGLVSNDPAGFNAVDVLALGALGHILGCGIVLGL
KSTGNL

The query sequence (length=86) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 7a4p:K 86 86 1.0000 1.0000 1.0000 3.89e-57 6zzx:K, 6zzy:K
2 8cmo:K 89 86 0.6279 0.6067 0.6279 1.36e-29
3 8htu:K 81 83 0.5698 0.6049 0.5904 1.61e-26 7ksq:K, 7kux:K, 6l35:K, 7xqp:K
4 7dz7:K 86 86 0.6047 0.6047 0.6047 5.16e-25 7bgi:K, 7blx:K, 7d0j:K, 7dz8:K, 6ijj:K, 6ijo:K, 7r3k:K, 7zq9:K, 7zqc:K, 7zqd:K, 7zqd:K2
5 8bcv:K 88 86 0.5581 0.5455 0.5581 2.47e-24 7ew6:K, 7ewk:K, 7f9o:K, 7f9o:n, 2wse:K, 5zji:K
6 6igz:K 80 83 0.5814 0.6250 0.6024 3.63e-24
7 8wgh:K 83 82 0.5581 0.5783 0.5854 2.98e-23
8 8j6z:K 84 86 0.5116 0.5238 0.5116 3.64e-22 7dkz:K, 8j7b:K, 5l8r:K, 4rku:K, 6yac:K, 6yez:K, 6zoo:K, 6zxs:K
9 7wfd:AK 65 84 0.4767 0.6308 0.4881 3.18e-17 7wfe:BK, 7wg5:AK, 7wg5:BK
10 4y28:K 57 82 0.4070 0.6140 0.4268 1.06e-12
11 8j7a:K 56 82 0.4070 0.6250 0.4268 2.53e-12
12 6sl5:K 84 75 0.3953 0.4048 0.4533 1.63e-11
13 7yca:K 87 79 0.3605 0.3563 0.3924 1.08e-09
14 8bcv:G 94 80 0.3488 0.3191 0.3750 1.99e-07
15 8wgh:G 98 80 0.3488 0.3061 0.3750 4.06e-07
16 7yca:G 95 79 0.3256 0.2947 0.3544 5.00e-07
17 5zji:G 97 80 0.3488 0.3093 0.3750 7.57e-07
18 3lw5:G 95 80 0.3372 0.3053 0.3625 7.61e-07 6igz:G, 2o01:G, 2wsc:G, 2wse:G, 2wsf:G, 4xk8:G, 4xk8:g
19 6l35:G 98 80 0.3372 0.2959 0.3625 7.89e-07 8htu:G, 7ksq:G, 7kux:G, 7xqp:G
20 8cmo:G 93 72 0.2791 0.2581 0.3333 2.74e-06
21 7wg5:AG 99 84 0.3605 0.3131 0.3690 4.13e-06 7dkz:G, 8j6z:G, 8j7a:G, 8j7b:G, 5l8r:G, 7wfd:AG, 7wfe:BG, 7wg5:BG, 6yac:G, 6yez:G, 6zoo:G, 6zxs:G
22 7zqc:G 80 65 0.2907 0.3125 0.3846 6.21e-06 7bgi:G, 7blx:G, 6jo5:G, 6jo6:G
23 6ijo:G 70 34 0.1860 0.2286 0.4706 2.31e-05 7r3k:G
24 7a4p:G 99 27 0.2093 0.1818 0.6667 5.51e-05 6zzx:G, 6zzy:G
25 7zq9:G 95 34 0.1860 0.1684 0.4706 5.67e-05 7d0j:G, 7dz7:G, 7dz8:G, 8h2u:G, 7zqd:G, 7zqd:G2
26 4xk8:k 46 80 0.3256 0.6087 0.3500 5.26e-04 4xk8:K
27 6jo5:K 45 22 0.2093 0.4000 0.8182 8.12e-04 8h2u:K, 6jo6:K
28 6kif:K 78 31 0.1977 0.2179 0.5484 0.001 6kif:U, 6kif:m, 6kig:K, 6kig:U, 6kig:m
29 8wm6:K 69 83 0.3140 0.3913 0.3253 0.001 8wmj:K, 8wmv:K, 8wmw:K
30 7y7b:K 78 81 0.3372 0.3718 0.3580 0.002 7y8a:K
31 6k61:k 78 82 0.3140 0.3462 0.3293 0.003 6jeo:aK, 6jeo:bK, 6jeo:cK, 6jeo:dK, 6k61:K, 6tcl:K1, 6tcl:K2
32 7y5e:KN 70 31 0.1628 0.2000 0.4516 0.037 7y5e:K2, 7y7a:K7, 7y7a:Ko
33 4l6v:K 80 76 0.2907 0.3125 0.3289 0.042 6hqb:K, 4l6v:k, 4l6v:0, 7o1v:K, 5oy0:K, 5oy0:k, 5oy0:8, 6uzv:K, 6uzv:k, 6uzv:8
34 7dr2:aK 69 24 0.1395 0.1739 0.5000 0.070 7dr0:K, 7dr2:cK
35 8asp:k 77 34 0.1860 0.2078 0.4706 0.078 8am5:k, 8asl:k, 6nwa:K, 6nwa:k, 6nwa:T, 7umh:K, 7umh:T, 7umh:k
36 8wey:K 63 76 0.2558 0.3492 0.2895 0.14
37 4kt0:K 53 24 0.1628 0.2642 0.5833 0.15
38 6tcl:K 60 32 0.1860 0.2667 0.5000 0.51 6tcl:KK
39 6kmx:aK 46 31 0.1628 0.3043 0.4516 0.70 6kmx:bK, 6kmx:cK
40 6vpv:K 78 25 0.1512 0.1667 0.5200 0.72 6vpv:k, 6vpv:9
41 7fix:K1 79 45 0.2093 0.2278 0.4000 0.73 7fix:K2, 7fix:K3, 6tra:K, 6trc:K, 6trc:k, 6trc:9, 6trd:K, 6trd:k, 6trd:9
42 7qco:K 65 36 0.2093 0.2769 0.5000 0.86 7qco:R, 7qco:r, 7qco:k
43 4rku:G 84 36 0.1744 0.1786 0.4167 1.3
44 6yxy:EM 330 53 0.1977 0.0515 0.3208 1.4
45 4y28:G 91 79 0.2907 0.2747 0.3165 1.8
46 5zgb:K 59 18 0.1279 0.1864 0.6111 2.6 7blz:K, 6fos:K, 5zgh:K
47 1y79:1 680 30 0.1860 0.0235 0.5333 3.6
48 7y5e:62 169 52 0.1744 0.0888 0.2885 3.9 7y5e:6N, 7y7a:67, 7y7a:6o
49 4a5g:A 307 43 0.1860 0.0521 0.3721 6.6 4a5g:B
50 1pa2:A 306 45 0.1860 0.0523 0.3556 6.7 1qo4:A
51 2x3b:A 295 40 0.1744 0.0508 0.3750 7.5 2x3a:A, 2x3b:B, 2x3c:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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