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BioLiP
>protein
YIFSKLCTFTITQKEFMNQHWYHCHTCKMVDGVGVCTVCAKVCHKDHEISYAKYGSFFCDCGAKEDGSCLAL

The query sequence (length=72) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8j9q:A 73 68 0.9444 0.9315 1.0000 3.39e-46 8j9q:B, 8j9q:C, 8j9r:A
2 8p82:A 1596 59 0.3194 0.0144 0.3898 1.48e-11 8p82:B
3 8bja:B 1638 59 0.3194 0.0140 0.3898 1.48e-11
4 8d4x:B 1669 59 0.3194 0.0138 0.3898 1.48e-11 8c06:A, 8c06:D
5 8e0q:A 1689 59 0.3194 0.0136 0.3898 1.48e-11 8d4x:A, 8e0q:B
6 8ewi:A 1775 59 0.3194 0.0130 0.3898 1.48e-11 8ewi:B, 8ewi:C, 8ewi:D
7 8bja:A 1563 59 0.3194 0.0147 0.3898 1.89e-11
8 7yrb:A 83 43 0.2639 0.2289 0.4419 7.47e-10 5vmd:A, 5vmd:C, 5vmd:B, 5vmd:D
9 7wul:A 70 47 0.2361 0.2429 0.3617 0.46 7wuk:A, 7wum:A, 7wun:A
10 7mex:A 1737 48 0.2083 0.0086 0.3125 0.61 6kgi:B, 7mey:A, 3nih:A, 3nii:A, 3nij:A, 3nik:B, 3nik:D, 3nik:A, 3nik:F, 3nil:D, 3nil:A, 3nil:B, 3nil:F, 3nim:B, 3nim:F, 3nim:A, 3nim:D, 3nin:A, 3nin:B, 3nis:A, 3nis:B, 3nis:D, 3nis:F, 3nit:A
11 8btd:SC 210 54 0.1944 0.0667 0.2593 0.71 8br8:SC, 8brm:SC, 8bsi:SC, 8bsj:SC, 8btr:SC, 8fvy:D, 8g4s:D, 7pwf:D, 7pwo:D1
12 7owj:F 197 35 0.1667 0.0609 0.3429 1.8 7owe:E, 7owe:F, 7owe:D, 7owe:A, 7owe:B, 7owe:C, 7owj:A, 7owj:B, 7owj:C, 7owj:D, 7owj:E, 7owk:B, 7owk:A, 7owk:C, 7owk:D, 7owk:E, 7owk:F, 7owl:A, 7owl:B, 7owl:C, 7owl:D, 7owl:E, 7owl:F
13 1x6h:A 86 36 0.1528 0.1279 0.3056 2.1
14 7q8e:A 397 31 0.1389 0.0252 0.3226 2.3 6gs2:B, 6gs2:D, 6h5e:B, 6h5e:D, 7q8e:C
15 4ylf:A 276 38 0.1944 0.0507 0.3684 5.4 4ylf:C, 4yry:A, 4yry:C
16 7w1m:H 322 36 0.1528 0.0342 0.3056 5.6 5k5h:A, 5k5i:A, 5k5j:A, 5k5l:E, 5k5l:G, 5k5l:F, 5kkq:A, 5kkq:D, 8ssq:A, 8ssq:D, 8ssr:A, 8ssr:D, 8sss:A, 8sss:D, 8sst:A, 8sst:D, 8ssu:A, 5t00:A, 5t00:D, 5t0u:A, 5t0u:D, 5und:A, 5und:B, 5yef:A, 5yef:B, 5yef:G, 5yef:J, 5yeg:A, 5yeg:B, 5yeh:A, 5yeh:B, 5yel:B, 5yel:A
17 7y70:A 77 53 0.2500 0.2338 0.3396 7.4 6lhn:A, 7xwd:A, 7xwe:A, 7xwe:B, 7xwf:A, 7xwg:A, 7xwg:B, 7y6w:A, 7y6x:A, 7y6x:B, 7y6x:D, 7y6x:E, 7y6x:F, 7y6x:G, 7y6x:H, 7y6x:C, 7y6y:A, 7y6y:B, 7y6y:C, 7y6y:D, 7y6z:A
18 7wj9:A 733 41 0.1944 0.0191 0.3415 8.0 7wj9:B, 7wj9:C, 7wj9:D, 7wj9:F, 7wj9:E, 7wjb:A, 7wjc:A, 7wjd:A, 7wje:A, 7wjf:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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