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BioLiP
>protein
YGVKYTCGACAHNFSLNKSDPVRCKECGHRVIYKARTKRMSKFLTT

The query sequence (length=46) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5x50:L 46 46 1.0000 1.0000 1.0000 9.47e-30
2 6a5o:L 45 42 0.8696 0.8889 0.9524 2.00e-25 6a5p:L, 8h0v:L, 8h0w:L, 8he5:L, 6ir9:L, 6j4w:L, 6j4x:L, 6j4y:L, 6j4z:L, 6j50:L, 6j51:L, 8jh2:L, 8jh3:L, 8jh4:L, 7wbv:L, 7wbw:L, 7wbx:L, 7xn7:L, 5xog:L, 5xon:L, 7xse:L, 7xsx:L, 7xsz:L, 7xt7:L, 7xtd:L, 7xti:L, 8yfq:L, 8yfr:L
3 8bws:L 50 41 0.4783 0.4400 0.5366 1.21e-13 4a3b:L, 4a3c:L, 4a3d:L, 4a3e:L, 4a3f:L, 4a3g:L, 4a3i:L, 4a3j:L, 4a3l:L, 4a3m:L, 4a93:L, 2b63:L, 2b8k:L, 4bbr:L, 4bbs:L, 6blo:L, 6blp:L, 6bm2:L, 6bm4:L, 6bqf:L, 4bxx:L, 4bxz:L, 4by7:L, 4c2m:1, 4c2m:L, 4c3h:L, 4c3i:L, 4c3j:L, 5c4j:L, 8cen:L, 8ceo:L, 6cnb:L, 6cnc:L, 6cnd:L, 6cnf:L, 3cqz:L, 2e2h:L, 2e2i:L, 2e2j:L, 6eu0:L, 6eu1:L, 6eu2:L, 6eu3:L, 6f41:L, 6f42:L, 6f44:L, 5fj8:L, 5fj9:L, 5fja:L, 5fmf:L, 5fyw:L, 5fz5:L, 5g5l:L, 3gtg:L, 3gtj:L, 3gtk:L, 3gtm:L, 3gtp:L, 3gtq:L, 3h3v:M, 6h67:L, 6h68:L, 6hko:L, 6hlq:L, 6hlr:L, 6hls:L, 3hou:L, 3hou:X, 3hov:L, 3how:L, 3hox:L, 3hoy:L, 3hoz:L, 1i3q:L, 3i4m:L, 3i4n:L, 1i50:L, 1i6h:L, 6i84:L, 5ip7:L, 5ip9:L, 3j0k:L, 2ja5:L, 2ja6:L, 2ja7:L, 2ja7:X, 2ja8:L, 9ja1:L, 8jch:L, 3k1f:L, 8k5p:L, 3k7a:L, 1k83:L, 7ked:L, 7kee:L, 7kef:L, 5lmx:L, 5m3f:L, 5m3m:L, 3m4o:L, 5m5w:L, 5m5x:L, 5m5y:L, 5m64:L, 7mei:L, 7mk9:L, 7ml0:L, 7ml1:L, 7ml2:L, 7ml4:L, 5n5y:L, 5n5z:L, 5n60:L, 5n61:L, 7nkx:L, 7nky:L, 2nvq:L, 2nvt:L, 2nvx:L, 2nvy:L, 2nvz:L, 7o4i:L, 7o4j:L, 6o6c:J, 7o72:L, 7o73:L, 7o75:L, 5oa1:L, 5ot2:L, 3po2:L, 3po3:L, 3qt1:L, 1r5u:L, 2r7z:L, 1r9s:L, 1r9t:L, 2r92:L, 2r93:L, 7rim:L, 7rip:L, 7riq:L, 7riw:L, 7rix:L, 7riy:L, 6rqt:L, 6ruo:L, 6rwe:L, 3rzd:L, 3rzo:L, 3s14:L, 3s15:L, 3s16:L, 3s17:L, 3s1m:L, 3s1n:L, 3s1q:L, 3s1r:L, 3s2d:L, 3s2h:L, 1sfo:L, 5sva:L, 6tps:L, 6tut:L, 8tug:L, 8tvp:L, 8tvq:L, 8tvs:L, 8tvv:L, 8tvw:L, 8tvx:L, 1twa:L, 1twc:L, 1twf:L, 1twg:L, 1twh:L, 5u5q:L, 8u9r:L, 8u9x:L, 8ukq:L, 8ukr:L, 8uks:L, 8ukt:L, 8uku:L, 6upx:L, 6upy:L, 6upz:L, 6uq0:L, 6uq1:L, 6uq2:L, 6uq3:L, 4v1m:L, 4v1n:L, 4v1o:L, 5vvr:L, 5vvs:L, 5w4u:L, 5w51:L, 5w5y:L, 5w64:L, 5w65:L, 5w66:L, 1wcm:L, 4x67:L, 4x6a:L, 1y1v:L, 1y1w:L, 4y52:L, 1y77:L, 4y7n:L, 4ym7:AL, 4ym7:BL, 4ym7:CL, 4ym7:DL, 4ym7:EL, 4ym7:FL, 2yu9:L, 7z0h:L, 7z1l:L, 7z1m:L, 7z1n:L, 7z1o:L, 7z2z:L, 7z30:L, 7z31:L, 7zs9:L, 7zsa:L, 7zsb:L
4 8a3y:L 47 39 0.4130 0.4043 0.4872 2.41e-10 7a6h:L, 7ae3:L, 7aea:L, 7b0y:L, 8b3d:L, 8b3f:L, 7b7u:L, 8bvw:L, 8byq:L, 8bz1:L, 7d58:L, 7d59:L, 7dn3:L, 7du2:L, 7edx:z, 7eg7:z, 7eg8:z, 7eg9:z, 7ega:z, 7egb:z, 7egc:z, 7ena:PL, 7enc:PL, 6exv:L, 7f4g:L, 7fji:L, 7fjj:L, 5flm:L, 6gmh:L, 6gml:L, 8gxq:PL, 8gxs:PL, 8ity:L, 8iue:L, 8iuh:L, 5iy6:L, 5iy7:L, 5iy8:L, 5iy9:L, 5iya:L, 5iyb:L, 5iyc:L, 7lbm:L, 7nvr:L, 7nvs:L, 7nvt:L, 7nvu:L, 7nvy:L, 7nvz:L, 7nw0:L, 6o9l:L, 7ob9:L, 7oba:L, 7obb:L, 8oeu:L, 8oev:L, 8oew:L, 8of0:L, 5oik:L, 7okx:L, 7oky:L, 7ol0:L, 7oo3:L, 7oob:L, 7oop:L, 7opc:L, 7opd:L, 7ozn:L, 7ozn:X, 7ozo:L, 7ozo:X, 7ozp:L, 7ozp:X, 8p4a:L, 8p4b:L, 8p4e:L, 8p4f:L, 7pks:L, 8rbx:L, 8s51:L, 8s52:L, 8s5n:L, 6ted:L, 8uha:L, 8uhd:L, 8uhg:L, 8ui0:L, 8uis:L, 7vba:L, 7vbb:L, 7vbc:L, 8w8e:L, 8w8f:L, 8wak:z, 8wal:z, 8wan:z, 8wao:z, 8wap:z, 8waq:z, 8war:z, 8was:z, 8wat:z, 8wau:z, 8wav:z, 8waw:z, 8wax:z, 8way:z, 8waz:z, 8wb0:z, 6xre:L, 7ycx:a, 7zwd:L, 7zx7:L, 7zx8:L
5 7aoc:L 45 39 0.4130 0.4222 0.4872 4.58e-10 7aod:L, 7aod:X, 7aoe:L, 3h0g:L, 3h0g:X
6 8hil:L 46 41 0.3696 0.3696 0.4146 9.54e-10 7eu0:L, 7eu1:L, 8him:L, 8hyj:L, 8xmb:L, 8xmc:L, 8xmd:L, 8xme:L
7 6drd:L 37 39 0.3478 0.4324 0.4103 2.61e-04
8 7ok0:P 47 36 0.3478 0.3404 0.4444 0.012 7oq4:P, 7oqy:P
9 2y0s:P 45 35 0.2826 0.2889 0.3714 0.050 4ayb:P, 3hkz:P, 3hkz:X, 2pmz:P, 2pmz:Z, 4v8s:AX, 4v8s:BP, 2waq:P, 2wb1:P, 2wb1:X, 2y0s:X
10 9bct:P 48 36 0.2609 0.2500 0.3333 0.11 9bcu:P, 4qiw:P, 4qiw:W
11 8cro:P 48 36 0.2826 0.2708 0.3611 0.21 8oki:P, 8orq:P, 8p2i:P, 8rbo:P
12 1v9p:A 584 19 0.1739 0.0137 0.4211 0.42 1dgs:A, 1dgs:B, 1v9p:B
13 5vzv:A 77 34 0.2609 0.1558 0.3529 1.6 5vzv:B, 5vzv:C, 5vzw:F, 5vzw:G
14 8oi7:A 346 20 0.1957 0.0260 0.4500 2.1 8oi7:B, 8oi9:A, 8oi9:B, 8oia:A, 8oia:B, 8oia:C, 8oia:D, 8oib:A, 8oib:B, 8oib:C, 8oib:D, 8oic:A, 8oic:B, 8oic:C, 8oic:D, 8oic:E, 8oic:F, 8oic:G, 8oic:H
15 8d4a:A 1207 25 0.2391 0.0091 0.4400 2.9 8d4b:A
16 7q3y:A 1201 25 0.2174 0.0083 0.4000 5.7 5am8:A, 5am8:B, 5am8:C, 5am8:D, 5am9:A, 5am9:B, 5am9:C, 5am9:D, 5ama:A, 5ama:B, 5ama:C, 5ama:D, 5amb:A, 5amb:B, 5amc:A, 5amc:B, 4aph:A, 4apj:A, 3bkk:A, 3bkl:A, 4bxk:A, 4bxk:B, 4bzr:A, 4bzs:A, 4bzs:B, 4c2n:A, 4c2o:A, 4c2p:A, 4c2q:A, 4c2r:A, 2c6f:A, 2c6f:B, 2c6n:A, 2c6n:B, 4ca5:A, 4ca6:A, 4ca6:B, 6en5:A, 6en5:B, 6en5:C, 6en5:D, 6en6:A, 6en6:B, 6en6:C, 6en6:D, 6f9r:A, 6f9r:B, 6f9t:A, 6f9u:A, 6f9v:A, 6f9v:B, 6h5w:A, 6h5x:A, 6h5x:B, 2iul:A, 2iux:A, 3l3n:A, 3nxq:A, 3nxq:B, 1o86:A, 1o8a:A, 2oc2:A, 7q24:B, 7q24:A, 7q25:B, 7q25:A, 7q26:B, 7q26:A, 7q27:A, 7q28:A, 7q29:A, 7q49:A, 7q4d:A, 7q4d:B, 7q4e:A, 8qfx:C, 8qfx:B, 8qfx:A, 8qfx:D, 8qhl:B, 8qhl:A, 6qs1:A, 6qs1:B, 6tt1:A, 6tt1:B, 6tt3:A, 6tt3:B, 6tt4:A, 6tt4:B, 4ufa:A, 4ufa:B, 4ufb:A, 4ufb:B, 4ufb:C, 4ufb:D, 1uze:A, 1uzf:A, 2xy9:A, 2xyd:A, 2xyd:B, 2ydm:A, 7z6z:B, 7z6z:A, 7z70:A, 6zpq:A, 6zpq:B, 6zpq:C, 6zpq:D, 6zpt:A, 6zpt:B, 6zpt:C, 6zpt:D, 6zpu:A
17 7zok:A 51 37 0.2391 0.2157 0.2973 6.5
18 4u7p:A 426 22 0.1957 0.0211 0.4091 8.6 3a1a:A, 3a1b:A, 8ba5:A, 6brr:A, 6brr:D, 6f57:A, 6f57:D, 6pa7:K, 6pa7:P, 4qbq:C, 4qbq:A, 4qbr:A, 4qbr:C, 4qbs:A, 2qrv:A, 2qrv:D, 2qrv:E, 2qrv:H, 8tdr:A, 8tdr:B, 8tdr:C, 8tdr:D, 8te1:A, 8te1:B, 8te1:C, 8te1:D, 8te3:A, 8te3:B, 8te3:C, 8te3:D, 8te4:A, 8te4:B, 8te4:C, 8te4:D, 4u7t:A, 4u7t:C, 6w89:A, 6w89:D, 6w89:G, 6w89:J, 6w8b:A, 6w8b:D, 6w8b:H, 6w8b:K, 6w8d:A, 6w8d:D, 6w8j:A, 6w8j:D, 5yx2:A, 5yx2:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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