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BioLiP
>protein
WSIGSTENMIVCFNTTAILGAMRFGLMPSVKKNFNGASSHTAMVEQANAKTIGSRDPSGFTAVDVLAGGSLATIISAGEI
LAGQVPY

The query sequence (length=87) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 7yca:K 87 87 1.0000 1.0000 1.0000 2.50e-60
2 8cmo:K 89 79 0.4253 0.4157 0.4684 3.44e-15
3 6igz:K 80 79 0.4138 0.4500 0.4557 7.44e-11
4 7dz7:K 86 79 0.4023 0.4070 0.4430 4.26e-10 7bgi:K, 7blx:K, 7d0j:K, 7dz8:K, 6ijj:K, 6ijo:K, 7r3k:K, 7zq9:K, 7zqc:K, 7zqd:K, 7zqd:K2
5 8htu:K 81 79 0.3563 0.3827 0.3924 4.93e-10 7ksq:K, 7kux:K, 6l35:K, 7xqp:K
6 7a4p:K 86 79 0.3563 0.3605 0.3924 1.09e-09 6zzx:K, 6zzy:K
7 8j6z:K 84 79 0.3333 0.3452 0.3671 1.18e-08 7dkz:K, 8j7b:K, 5l8r:K, 4rku:K, 6yac:K, 6yez:K, 6zoo:K, 6zxs:K
8 8bcv:K 88 79 0.3333 0.3295 0.3671 1.62e-08 7ew6:K, 7ewk:K, 7f9o:K, 7f9o:n, 2wse:K, 5zji:K
9 8wgh:K 83 78 0.3563 0.3735 0.3974 2.03e-07
10 6sl5:K 84 73 0.3333 0.3452 0.3973 4.47e-06
11 7wfd:AK 65 80 0.3103 0.4154 0.3375 4.79e-06 7wfe:BK, 7wg5:AK, 7wg5:BK
12 8j7a:K 56 51 0.2184 0.3393 0.3725 0.001
13 8cmo:G 93 73 0.2069 0.1935 0.2466 0.002
14 6l35:G 98 73 0.2759 0.2449 0.3288 0.002 8htu:G, 7ksq:G, 7kux:G, 7xqp:G
15 5zji:G 97 50 0.2759 0.2474 0.4800 0.003
16 8wgh:G 98 50 0.2644 0.2347 0.4600 0.011
17 4y28:K 57 79 0.3103 0.4737 0.3418 0.028
18 8bcv:G 94 28 0.1609 0.1489 0.5000 0.099
19 7wg5:AG 99 50 0.2414 0.2121 0.4200 0.11 7dkz:G, 8j6z:G, 8j7a:G, 8j7b:G, 5l8r:G, 7wfd:AG, 7wfe:BG, 7wg5:BG, 6yac:G, 6yez:G, 6zoo:G, 6zxs:G
20 3lw5:G 95 31 0.1839 0.1684 0.5161 0.15 6igz:G, 2o01:G, 2wsc:G, 2wse:G, 2wsf:G, 4xk8:G, 4xk8:g
21 7a4p:G 99 79 0.2759 0.2424 0.3038 0.28 6zzx:G, 6zzy:G
22 7zqc:G 80 63 0.1839 0.2000 0.2540 2.0 7bgi:G, 7blx:G, 6jo5:G, 6jo6:G
23 7yca:G 95 22 0.1264 0.1158 0.5000 3.0
24 7zq9:G 95 73 0.2184 0.2000 0.2603 3.7 7d0j:G, 7dz7:G, 7dz8:G, 8h2u:G, 7zqd:G, 7zqd:G2
25 7d4c:A 595 17 0.1034 0.0151 0.5294 4.3 7c3h:A, 7c3h:B, 7c3i:A, 7c3i:B, 7c3j:A, 7c3j:B, 7c3l:A, 7c3l:B, 7d4d:A, 7d4e:A, 3x0v:A, 3x0v:B
26 1jcg:A 335 52 0.1839 0.0478 0.3077 5.1
27 5dtu:A 404 29 0.1264 0.0272 0.3793 5.3
28 6s6t:E 472 67 0.2069 0.0381 0.2687 6.1 6s6s:G, 6s6s:E, 6s6s:F, 6s6s:H, 6s6t:F, 6s6t:G, 6s6u:G, 6s6u:H, 6s6u:I, 6s6u:J, 6s6x:G, 6s6x:H, 6s6x:I, 6s6x:J, 6s6x:K, 6s6x:L, 2vdc:G, 2vdc:H, 2vdc:I, 2vdc:J, 2vdc:K, 2vdc:L
29 1lq1:C 112 41 0.1494 0.1161 0.3171 8.5 1lq1:D, 1lq1:A, 1lq1:B
30 5izk:B 451 28 0.1379 0.0266 0.4286 8.9
31 5k0t:B 468 51 0.1494 0.0278 0.2549 9.6
32 5k0s:C 497 51 0.1494 0.0262 0.2549 9.6 5k0s:A, 5k0s:B, 5k0t:A, 5k0t:C, 4py2:A, 4py2:B, 4py2:C
33 8u2m:B 382 26 0.1264 0.0288 0.4231 9.8 8u2m:A, 8u2m:C, 8u3n:A, 8u3n:B, 8u3n:C, 8ukz:A, 8ukz:B, 8ukz:C

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218