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BioLiP
>protein
WGAQGHRLVAEVADARLNPTARAEVDRLLATEPDATLASIAPWADQLRAKDPGLGRRSAGWHYVNIAEDNCHYEAPKHCR
NGNCIVEALKAQSTILGDRSLTDGERLQALKFVVHLVGDIHQPMHAGYAHDKGGNDFQLQFGNRGTNLHSLWDSGMLNTR
KLDDAGYLPLLQSQRAPKLARQSNPQRDPQTWAEASCRISMQAGVYPATRKIGDEYTERYRPLAEAQLRLAGENLAQLLN
RVLGARLEH

The query sequence (length=249) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8qjp:A 250 249 1.0000 0.9960 1.0000 0.0 8qjl:A, 8qjm:A, 8qjm:B, 8qjn:A, 8qjn:B, 8qjo:A, 8qjo:B, 8qjp:B, 8qjq:A, 8qjq:B
2 4cxv:A 258 263 0.3012 0.2907 0.2852 8.75e-33 4cwm:A, 4cwm:B, 4cxo:A, 4cxp:A, 4cxv:B, 3w52:A
3 5fb9:A 267 267 0.2972 0.2772 0.2772 1.58e-25 5fb9:B, 5fba:A, 5fbb:A, 5fbb:B, 5fbc:A, 5fbd:A, 5fbf:A, 5fbg:A, 5fbg:B, 7qta:A, 7qta:B, 7qtb:A, 7qtb:B
4 3sng:A 267 269 0.2771 0.2584 0.2565 7.25e-23 4dj4:A, 4dj4:B, 4jdg:A
5 1ak0:A 264 269 0.3293 0.3106 0.3048 7.60e-22
6 3rf7:A 362 43 0.0522 0.0359 0.3023 1.7
7 8d97:A 1600 127 0.1205 0.0187 0.2362 2.6
8 4laj:A 343 88 0.0924 0.0671 0.2614 3.0 4dvr:G, 2i5y:G, 2i5y:P, 2i60:G, 2i60:P, 4jzw:G, 4jzw:A, 4jzz:A, 4k0a:A, 4ka2:A, 4laj:J, 4laj:F, 4laj:B, 4r4f:A, 1yyl:G, 1yyl:P, 1yym:G, 1yym:P
9 4en4:A 310 87 0.0964 0.0774 0.2759 4.3 2ajp:A, 2ajp:B, 4en4:B, 4eoh:A, 4eoh:B, 3fhx:A, 3fhx:B, 3fhy:A, 3fhy:B, 3keu:A, 3keu:B, 8wr2:A, 8wr2:B, 2yxt:A, 2yxt:B, 2yxu:A, 2yxu:B
10 2wyh:A 905 45 0.0602 0.0166 0.3333 4.4 2wyh:B, 2wyi:A, 2wyi:B
11 2f3m:A 218 36 0.0522 0.0596 0.3611 4.6 2f3m:B, 2f3m:C, 2f3m:D, 2f3m:E, 2f3m:F, 1xw6:A, 1xw6:B, 1xw6:C, 1xw6:D, 1xwk:A, 1xwk:B, 1xwk:C, 1yj6:A, 1yj6:B, 1yj6:C
12 9enh:A 544 58 0.0723 0.0331 0.3103 7.1 9enh:B, 9enh:C, 9enh:D, 9eni:A, 9eni:B, 9eni:C, 9eni:D, 9enj:A, 9enj:B, 9enj:C, 9enj:D, 9enk:A, 9enk:B, 9enk:C, 9enk:D, 9enn:A, 9enn:B, 9enn:C, 9enn:D
13 3dwc:B 504 30 0.0482 0.0238 0.4000 7.5 3dwc:A, 3dwc:C, 3dwc:D
14 1ah7:A 245 39 0.0522 0.0531 0.3333 8.8 2ffz:A, 2fgn:A, 2huc:A, 1p5x:A, 1p6d:A, 1p6e:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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