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BioLiP Library
>protein
WDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSANAPQDVLPITRGPQQPPKLGPRGKI

The query sequence (length=75) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 7wfd:AH 95 75 0.9067 0.7158 0.9067 1.10e-44 8j6z:H, 8j7a:H, 8j7b:H, 2o01:H, 7wfe:BH, 7wg5:AH, 2wsc:H, 2wse:H, 2wsf:H
2 4xk8:H 90 75 0.8667 0.7222 0.8667 3.06e-42 4xk8:h
3 6yez:H 93 72 0.8000 0.6452 0.8333 7.83e-39 7dkz:H, 5l8r:H, 3lw5:H, 4rku:H, 4y28:H, 6yac:H, 6zoo:H, 6zxs:H
4 8htu:H 95 74 0.5600 0.4421 0.5676 1.62e-28 7ksq:H, 7kux:H, 6l35:H, 7xqp:H
5 8wgh:H 90 75 0.7867 0.6556 0.7867 5.22e-21
6 5zji:H 95 75 0.8267 0.6526 0.8267 4.04e-20 8bcv:H, 8bcw:H
7 6zzx:H 94 75 0.4267 0.3404 0.4267 2.16e-16 6zzy:H
8 7yca:H 96 76 0.4133 0.3229 0.4079 3.39e-08
9 7d0j:H 100 76 0.3467 0.2600 0.3421 6.80e-08 7dz7:H, 7dz8:H, 8h2u:H, 6ijo:H
10 6igz:H 88 74 0.4133 0.3523 0.4189 9.77e-08
11 6sl5:H 92 77 0.3200 0.2609 0.3117 1.95e-04
12 6tq4:A 297 30 0.1867 0.0471 0.4667 0.20 6tq6:A
13 7xrr:A 309 30 0.1867 0.0453 0.4667 0.21 7l1u:R, 7l1v:R, 7sqo:R, 7sr8:R
14 6tpn:A 510 30 0.1867 0.0275 0.4667 0.22 4s0v:A, 6tpg:A, 6tpj:A, 6tpj:B, 5wqc:A, 5ws3:A
15 6tp3:A 314 30 0.1867 0.0446 0.4667 0.22 6to7:A, 6to7:B, 6tod:A, 6tod:B, 6tos:A, 6tos:B, 6tot:A, 6tot:B, 6tp3:B, 6tp4:A, 6tp4:B, 6tp6:A, 6tp6:B, 6tq4:B, 6tq6:B, 6tq7:A, 6tq7:B, 6tq9:A, 6tq9:B
16 6v9s:A 503 29 0.1867 0.0278 0.4828 0.34 4zj8:A, 4zjc:A
17 5v1d:A 193 70 0.2533 0.0984 0.2714 3.2
18 5i4e:A 959 21 0.1467 0.0115 0.5238 3.5
19 5v1d:D 247 61 0.2533 0.0769 0.3115 3.9 5v1d:C
20 5wvp:A 924 43 0.2000 0.0162 0.3488 7.8
21 2ap1:A 305 34 0.1333 0.0328 0.2941 8.9
22 7tt7:D 102 48 0.1867 0.1373 0.2917 8.9
23 4o4y:H 215 54 0.2533 0.0884 0.3519 8.9 5dmg:C, 5dmg:H, 5dmg:E, 4o51:H, 4o51:B, 4o51:D, 4o51:F
24 8bo1:B 398 65 0.2667 0.0503 0.3077 9.8 8bo1:D, 8br0:B, 8br0:D, 8br1:B, 8br1:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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