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BioLiP
>protein
VTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFDQINVTFLDLEYEMKKLEEA
IKKLEESYIDLKE

The query sequence (length=93) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7c53:E 93 93 1.0000 1.0000 1.0000 4.38e-61
2 6lxt:E 114 114 0.7419 0.6053 0.6053 1.29e-36
3 7xog:B 348 82 0.6774 0.1810 0.7683 3.81e-35
4 7xu5:B 938 82 0.6882 0.0682 0.7805 7.62e-34 7xu5:A, 7xu5:C
5 7cn8:A 1125 70 0.6667 0.0551 0.8857 3.52e-33 7cn8:B, 7cn8:C, 7ek6:A, 7xu0:A, 7xu1:C, 7xu1:B, 7xu2:A, 7xu2:C, 7xu2:B, 7xu4:A, 7xu4:C, 7xu4:B
6 8cya:A 1100 70 0.6667 0.0564 0.8857 5.95e-33 7nt9:A, 7nt9:B, 7nt9:C, 7nta:B, 7nta:C, 7nta:A, 7ntc:A, 7ntc:B, 8p9y:C
7 7q9f:A 1009 70 0.6667 0.0614 0.8857 6.05e-33 7akd:C, 7l56:B, 7l56:C, 7l56:A, 7q9f:B
8 7jji:A 1109 70 0.6667 0.0559 0.8857 6.07e-33 8aaa:A, 7b62:A, 7beh:E, 7bem:E, 8bec:B, 8bec:D, 7d2z:B, 7d30:B, 7dwy:A, 7dwy:B, 7dwy:C, 7e7b:A, 7e7b:B, 7e7b:C, 7f5g:C, 8j1q:C, 8j26:C, 7jji:C, 7jji:B, 7kmh:C, 7l2c:B, 7l4z:B, 7l4z:D, 7l4z:A, 7l4z:C, 7l4z:E, 7ldj:A, 7ly3:A, 7ly3:B, 7q0i:D, 8qh0:A, 7qur:A, 7qur:B, 7qur:C, 7qus:A, 7qus:B, 7qus:C, 7r6w:R, 7sn0:C, 7wd8:B, 7wgv:A, 7wgv:B, 7wgv:C, 7wk8:A, 7x08:A, 7x08:B, 7x08:C, 7x2l:E, 7x93:G, 7xtz:A, 7xtz:C, 7xtz:B, 7xu0:C, 7xu0:B, 7xu1:A, 7xu6:A, 7xu6:C, 7xu6:B, 7xwa:D, 7y0c:E, 7y0c:R, 7yck:A, 7z8o:A, 7zbu:A, 6zp2:A, 6zp2:C, 6zp2:B
9 7wuh:E 1044 70 0.6667 0.0594 0.8857 7.35e-33 7wuh:A, 7xu3:B, 7xu3:A, 7xu3:C, 6zb5:A, 6zb5:C, 6zb5:B
10 7y42:A 968 70 0.6667 0.0640 0.8857 1.08e-32 7y42:B, 7y42:D
11 7tei:B 1042 82 0.6667 0.0595 0.7561 1.20e-32
12 8bon:B 1070 70 0.6559 0.0570 0.8714 2.84e-32 8bon:A, 8bon:C, 7nd7:A, 7nd7:B, 7nd7:C, 8xut:B, 8xut:A
13 8h3m:C 930 70 0.6344 0.0634 0.8429 9.24e-31
14 8xus:B 1063 70 0.6237 0.0546 0.8286 3.95e-30 8if2:B
15 8hlc:A 1081 70 0.6452 0.0555 0.8571 4.27e-30 7e7d:A, 7e7d:B, 7e7d:C, 8h3e:A, 8h3e:B, 8h3e:C, 8hlc:B, 8hlc:C, 7odl:A, 7odl:B, 7odl:C, 7wgx:A, 7wgx:B, 7wgx:C, 6zb4:C, 6zb4:B, 6zb4:A, 6zoz:A, 6zoz:B, 6zoz:C
16 8tc0:B 1091 82 0.5914 0.0504 0.6707 7.88e-30 8tc0:A, 8tc0:C, 8tc1:C, 8tc1:A, 8tc1:B, 8tc5:C, 8tc5:A, 8tc5:B, 1zv8:A, 1zv8:C, 1zv8:E, 5zvm:A, 5zvm:B
17 8h0z:B 1045 82 0.5914 0.0526 0.6707 1.37e-29 8h0x:A, 8h0x:B, 8h0x:C, 8h0y:A, 8h0y:C, 8h0z:C, 8h14:B, 8h14:C, 8h14:A
18 8h10:A 1026 82 0.5914 0.0536 0.6707 1.44e-29 8h0y:B, 8h0z:A, 8h10:B, 8h10:C, 7zh1:A, 7zh1:B, 7zh1:C, 7zh2:A, 7zh2:B, 7zh2:C
19 7od3:A 1012 82 0.6344 0.0583 0.7195 4.93e-29 7od3:B, 7od3:C
20 8opo:A 1195 82 0.4086 0.0318 0.4634 8.08e-17 5kwb:A, 8opm:A, 8opm:B, 8opm:C, 8opn:A, 8opn:B, 8opn:C, 8opo:B, 8opo:C, 8y7y:A
21 6nb3:A 1169 70 0.3763 0.0299 0.5000 8.89e-17 5gmq:A, 6j11:A, 6j11:B, 6j11:C, 7m5e:C, 7m5e:E, 7m5e:A, 6nb4:A, 6pxh:A, 6pxh:B, 6q04:C, 6q04:A, 6q04:B, 6q05:C, 6q05:A, 6q05:B, 6q06:C, 6q06:A, 6q06:B, 6q07:C, 6q07:A, 6q07:B, 7ymt:B, 7ymt:C, 7ymv:A, 7ymv:B, 7ymy:B, 7ymz:B, 7yn0:A, 7yn0:B, 7yn0:C
22 8sak:A 1121 78 0.3978 0.0330 0.4744 9.89e-17
23 7sbw:B 1196 70 0.3871 0.0301 0.5143 4.57e-16 6nzk:A, 6nzk:B, 6nzk:C, 7sb3:J, 7sb3:A, 7sb3:B, 7sb4:A, 7sb4:C, 7sb4:B, 7sbv:J, 7sbv:A, 7sbv:B, 7sbw:J, 7sbw:A, 7sbx:J, 7sbx:B, 7sbx:A, 7sby:J, 7sby:A, 7sby:B
24 8fr7:A 1275 75 0.3548 0.0259 0.4400 1.59e-09 8fr7:C, 8fr7:B
25 8fr7:A 1275 54 0.1935 0.0141 0.3333 0.39 8fr7:C, 8fr7:B
26 7y6t:A 1124 81 0.3333 0.0276 0.3827 8.38e-09
27 7y6t:C 1098 81 0.3333 0.0282 0.3827 8.88e-09
28 7w6m:A 1224 81 0.3333 0.0253 0.3827 8.91e-09 7w6m:C, 7w6m:B, 7w73:C, 7w73:A, 7y6t:B, 7y6u:A
29 6u7k:A 1064 81 0.3441 0.0301 0.3951 8.12e-08
30 6vv5:A 1097 81 0.3333 0.0283 0.3827 5.40e-07 6vv5:B, 6vv5:C
31 5d00:A 361 91 0.2796 0.0720 0.2857 0.53 5d00:B, 5d01:A, 5d01:B
32 8wt9:A 319 54 0.1828 0.0533 0.3148 0.67 8wt6:A, 8wt6:B, 8wt6:C, 8wt6:D, 8wt7:A, 8wt7:B, 8wt7:C, 8wt7:D, 8wt8:A, 8wt8:B, 8wt8:C, 8wt8:D, 8wt9:B, 8wt9:C, 8wt9:D
33 6eur:B 328 50 0.1613 0.0457 0.3000 1.00 6exf:B
34 6f9p:B 289 50 0.1613 0.0519 0.3000 1.2
35 6euo:C 354 50 0.1613 0.0424 0.3000 1.3 6euo:A, 6euo:B, 6euo:D, 6eur:A, 6eur:C, 6eur:D, 6exf:A, 6exf:C, 6exf:D, 6exh:A, 6exh:B, 6exh:C, 6exh:D, 6f9p:A, 6f9p:C, 6f9p:D
36 6yhn:A 460 54 0.2151 0.0435 0.3704 2.4 6yhm:A
37 6gn6:F 428 54 0.1720 0.0374 0.2963 3.9 6gn6:A, 6gn6:C, 6gn6:E, 6gn6:D, 6gn6:B
38 4nhy:A 461 34 0.1613 0.0325 0.4412 4.2 4nhx:A, 4nhy:B, 4nhy:C, 4nhy:D
39 7w7t:A 1021 42 0.1183 0.0108 0.2619 6.6 7bt2:A, 7e7s:A, 6hxb:A, 6jju:A, 6lle:A, 6lly:A, 6ln5:A, 6ln6:A, 6ln7:A, 6ln8:A, 6ln9:A, 5mpm:A, 2voy:B, 2voy:H, 2voy:E, 2voy:K, 7w7u:A, 7w7v:A, 7w7w:A
40 3czk:A 618 31 0.1398 0.0210 0.4194 7.3 3czg:A, 3czl:A
41 6ks6:h 527 55 0.2043 0.0361 0.3455 7.5 6ks6:H, 4v81:G, 4v81:g, 4v8r:AH, 4v8r:Ah, 4v8r:BH, 4v8r:Bh, 4v94:G, 4v94:O, 4v94:g, 4v94:o, 7ylw:H, 7ylw:h, 7ylx:H, 7ylx:h, 7yly:H, 7yly:h
42 8jib:E 661 34 0.1183 0.0166 0.3235 7.6 8ji8:A, 8ji8:B, 8ji8:C, 8ji8:D, 8jib:A, 8jib:B, 8jib:C, 8jib:D, 8jib:F, 8jib:G, 8jib:H, 8jib:I, 8jib:J, 8jib:K, 8jib:L
43 6uss:A 485 26 0.1183 0.0227 0.4231 9.6 6uss:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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