BioLiP

>protein
VTGAVSSVNMRRFQRVPKVSGFSAKVTKKNVNKALDKADMFFAKSVTMEGKAAAIPYGVYGIQCMEGSAKGMAHEKRAMA
LSAAFRMNQRSAAEKTGAMYENRRLALILAQNDHQEKQYIKYPKLAAAALMASTEVTRACQRYAVPESIEEEFLAASVDK
VNKMRGTTASGVYKSSCVEGNAKGQAEQARVAALAVAFRSAQKSASQFAAERYAQSKYGRDLFSSTHFEEGYANTYPAMA
AAKRASSYGY

The query sequence (length=250) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	7ezx:BB	250	250	1.0000	1.0000	1.0000	0.0	7ezx:yJ, 7ezx:yL, 7ezx:BM, 6kgx:B8, 6kgx:BA, 6kgx:yE, 6kgx:yG, 7y4l:yF, 7y4l:BH, 7y4l:B4, 7y4l:y8, 7y5e:yF, 7y5e:BJ, 7y5e:yK, 7y5e:BM, 7y7a:B3, 7y7a:y6, 7y7a:BC, 7y7a:yQ, 7y7a:yT, 7y7a:BV, 7y7a:yb, 7y7a:Bp
2	7ezx:A1	257	240	0.5520	0.5370	0.5750	8.83e-85	7ezx:A7, 7ezx:A9, 7ezx:AF, 7ezx:AI, 7ezx:AK, 6kgx:A2, 6kgx:Y3, 6kgx:A6, 6kgx:A7, 6kgx:A9, 6kgx:AB, 6kgx:YD, 6kgx:AF, 6kgx:AI, 6kgx:AJ, 7y4l:AB, 7y4l:AC, 7y4l:AD, 7y4l:AE, 7y4l:AJ, 7y4l:YK, 7y4l:Y1, 7y4l:A2, 7y4l:A5, 7y4l:A6, 7y5e:YA, 7y5e:AD, 7y5e:AE, 7y5e:AG, 7y5e:AH, 7y5e:AO, 7y5e:AQ, 7y5e:A1, 7y5e:A4, 7y5e:Y7, 7y7a:A1, 7y7a:A2, 7y7a:A4, 7y7a:Y5, 7y7a:A8, 7y7a:YD, 7y7a:AF, 7y7a:AI, 7y7a:AK, 7y7a:AM, 7y7a:AP, 7y7a:AR, 7y7a:AS, 7y7a:Ac, 7y7a:Ae, 7y7a:Yg, 7y7a:Yi, 7y7a:Aj, 7y7a:Al, 7y7a:An
3	7ezx:AB	238	233	0.4720	0.4958	0.5064	5.25e-66	7ezx:wJ, 7ezx:xJ, 7ezx:wL, 7ezx:xL, 7ezx:AM, 6kgx:A8, 6kgx:AA, 6kgx:wE, 6kgx:xE, 6kgx:wG, 6kgx:xG, 7y4l:wF, 7y4l:AH, 7y4l:A4, 7y4l:w8, 7y4l:x8, 7y4l:xF, 7y5e:wF, 7y5e:AJ, 7y5e:wK, 7y5e:AM, 7y5e:xF, 7y5e:xK, 7y7a:A3, 7y7a:w6, 7y7a:x6, 7y7a:AC, 7y7a:wQ, 7y7a:xQ, 7y7a:wT, 7y7a:xT, 7y7a:AV, 7y7a:wb, 7y7a:xb, 7y7a:Ap
4	5y6p:C2	245	245	0.4000	0.4082	0.4082	5.97e-50	5y6p:D2, 5y6p:c3, 5y6p:d3, 5y6p:44, 5y6p:Z5, 5y6p:e8, 5y6p:c8, 5y6p:d8, 5y6p:e9, 5y6p:c9, 5y6p:d9, 5y6p:T8, 5y6p:Y9, 5y6p:aZ, 5y6p:bZ
5	5y6p:lz	251	212	0.3640	0.3625	0.4292	1.59e-42	5y6p:ly, 5y6p:hY, 5y6p:hZ
6	7y4l:MI	275	217	0.3360	0.3055	0.3871	1.10e-36	7ezx:MA, 7ezx:MG, 7ezx:MN, 7ezx:MQ, 6kgx:M1, 6kgx:21, 6kgx:M4, 6kgx:24, 7y4l:ZI, 7y4l:M9, 7y4l:Z9, 7y5e:Z9, 7y5e:M5, 7y5e:Z5, 7y5e:M9, 7y7a:MH, 7y7a:ZH, 7y7a:Ma, 7y7a:Mf, 7y7a:Za, 7y7a:Zf, 7y7a:Mh, 7y7a:Zh
7	7y4l:MI	275	95	0.1480	0.1345	0.3895	7.60e-12	7ezx:MA, 7ezx:MG, 7ezx:MN, 7ezx:MQ, 6kgx:M1, 6kgx:21, 6kgx:M4, 6kgx:24, 7y4l:ZI, 7y4l:M9, 7y4l:Z9, 7y5e:Z9, 7y5e:M5, 7y5e:Z5, 7y5e:M9, 7y7a:MH, 7y7a:ZH, 7y7a:Ma, 7y7a:Mf, 7y7a:Za, 7y7a:Zf, 7y7a:Mh, 7y7a:Zh
8	5y6p:eZ	309	211	0.3200	0.2589	0.3791	2.53e-28	5y6p:eY
9	5y6p:eZ	309	96	0.1160	0.0939	0.3021	0.054	5y6p:eY
10	5y6p:A2	277	213	0.3080	0.2780	0.3615	2.22e-27	5y6p:a3, 5y6p:34, 5y6p:Y5, 5y6p:b8, 5y6p:b9, 5y6p:U8, 5y6p:Z9, 5y6p:aY, 5y6p:bY, 5y6p:dw, 5y6p:dx, 5y6p:ey, 5y6p:ez
11	5y6p:gy	260	218	0.2600	0.2500	0.2982	1.78e-22	5y6p:gz
12	7lep:G	164	31	0.0480	0.0732	0.3871	2.0	7ldd:G, 7ldd:H, 7lde:G, 7lde:H, 7lep:H
13	5mtv:A	379	62	0.0520	0.0343	0.2097	6.5	5mvf:A
14	1z6o:A	212	50	0.0640	0.0755	0.3200	7.2	1z6o:E, 1z6o:L, 1z6o:B, 1z6o:D, 1z6o:K, 1z6o:C, 1z6o:H, 1z6o:I, 1z6o:F, 1z6o:G, 1z6o:J

[Back]