BioLiP

>protein
VNFEEVRELVPQKYPFLFIDKVIELQKESRIVCLKNISGNEPFFAGHFPDFAIMPGVLIVEALAQASIILFKKSFKDKVF
LLASANVRFSKPVFPGDQLILEIDIEKVISSAAIVKGVAKVGDKVVTKATLSFGVANKD

The query sequence (length=139) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	7qv0:A	139	139	1.0000	1.0000	1.0000	5.65e-96	7qv0:B, 7qv0:C
2	6n3p:D	146	136	0.4317	0.4110	0.4412	3.21e-33	6n3p:A, 6n3p:B, 6n3p:C, 6n3p:E, 6n3p:F
3	3az8:F	146	132	0.4460	0.4247	0.4697	3.50e-33	3az8:C, 3az8:D, 3az8:E, 3az8:O, 3az8:P, 3az8:Q, 3az8:R, 3az9:C, 3az9:D, 3az9:E, 3az9:F, 3az9:M, 3az9:N, 3az9:O, 3az9:P, 3az9:Q, 3az9:R, 3aza:A, 3aza:B, 3aza:C, 3aza:D, 3aza:M, 3aza:N, 3aza:O, 3aza:P, 3aza:Q, 3aza:R, 3aza:U, 3aza:V, 3azb:C, 3azb:D, 3azb:G, 3azb:H, 3azb:I, 3azb:J, 3azb:O, 3azb:P
4	3b7j:A	152	145	0.3957	0.3618	0.3793	7.05e-26	3b7j:C, 3cf8:A, 3cf8:B, 3cf8:C, 3cf9:A, 3cf9:B, 3cf9:C, 3d04:A, 3d04:B, 3d04:C, 3d04:D, 3doy:A, 3doy:B, 3doy:C, 3doy:D, 3doz:A, 3doz:B, 3doz:C, 3doz:D, 3dp0:A, 3dp0:B, 3dp1:A, 3dp1:B, 3dp1:C, 3dp1:D, 3dp2:A, 3dp2:B, 3dp2:C, 3dp3:A, 3dp3:B, 3dp3:C, 3dp3:D, 3ed0:A, 3ed0:B, 3ed0:C, 2glm:A, 2glm:B, 2glp:A, 2glp:B, 2glp:C, 2glp:D, 6ihc:A, 6ihc:B, 4zjb:A
5	7bka:E	171	132	0.2374	0.1930	0.2500	0.003	4b0b:A, 4b0b:B, 4b0c:A, 4b0c:B, 4b0c:D, 4b0c:C, 4b0c:E, 4b0i:A, 4b0i:B, 4b0i:C, 4b0i:D, 4b0i:E, 4b0j:A, 4b0j:B, 4b0j:C, 4b0j:D, 4b0j:E, 4b0j:F, 4b0j:G, 4b0j:H, 4b0j:I, 4b0j:J, 4b0j:K, 4b0j:L, 4b0j:M, 4b0j:N, 4b0j:O, 4b0j:P, 4b0j:Q, 4b0j:R, 4b0j:S, 4b0j:T, 8b72:A, 8b72:B, 4b8u:A, 4b8u:B, 7bhj:B, 7bhj:C, 7bhj:D, 7bhj:E, 7bis:A, 7bis:B, 7bis:C, 7bis:D, 7bis:E, 7bk9:A, 7bk9:B, 7bk9:C, 7bk9:D, 7bk9:E, 7bka:A, 7bka:B, 7bka:C, 7bka:D, 4cl6:A, 4cl6:B, 4cl6:C, 4cl6:D, 4cl6:E
6	5f6r:A	173	94	0.2086	0.1676	0.3085	0.19	5f6r:B
7	4p72:D	244	93	0.1871	0.1066	0.2796	1.3	4p72:C, 4p73:C, 4p73:D, 4p74:C, 4p74:D, 4p75:C, 4p75:D
8	4v8l:D	2822	43	0.1007	0.0050	0.3256	3.6	4ce4:o, 6hiv:US, 6hiv:UT, 6hiw:US, 6hiw:UT, 6hiy:US, 6hiy:UT, 4v8l:E, 4v8l:F, 4v8l:A, 4v8l:B, 4v8l:C, 4v8v:A, 4v8v:B, 4v8v:C, 4v8v:D, 4v8v:E, 4v8v:F, 4v8w:D, 4v8w:E, 4v8w:F, 4v8w:A, 4v8w:B, 4v8w:C
9	2f3x:A	143	24	0.0647	0.0629	0.3750	4.6	2f3x:B
10	1yvp:B	532	65	0.1727	0.0451	0.3692	7.0	2i91:A, 2i91:B, 1yvp:A
11	6gjc:A	2770	49	0.1079	0.0054	0.3061	9.9	6gjc:B, 6gjc:C, 6gjc:D, 6gjc:E, 6gjc:F

[Back]