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BioLiP
>protein
VLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEDVDLGD
ISGINASVVNIQKEIDRLNEVAKNLNESLIDLQE

The query sequence (length=114) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6lxt:E 114 114 1.0000 1.0000 1.0000 3.39e-74
2 7xog:B 348 74 0.6491 0.2126 1.0000 2.62e-43
3 7xog:B 348 36 0.2544 0.0833 0.8056 3.84e-10
4 7xu5:B 938 74 0.6404 0.0778 0.9865 4.18e-40 7xu5:A, 7xu5:C
5 7cn8:A 1125 74 0.6316 0.0640 0.9730 2.14e-39 7cn8:B, 7cn8:C, 7ek6:A, 7xu0:A, 7xu1:C, 7xu1:B, 7xu2:A, 7xu2:C, 7xu2:B, 7xu4:A, 7xu4:C, 7xu4:B
6 8cya:A 1100 74 0.6316 0.0655 0.9730 3.00e-39 7nt9:A, 7nt9:B, 7nt9:C, 7nta:B, 7nta:C, 7nta:A, 7ntc:A, 7ntc:B, 8p9y:C
7 7q9f:A 1009 74 0.6316 0.0714 0.9730 3.63e-39 7akd:C, 7l56:B, 7l56:C, 7l56:A, 7q9f:B
8 7jji:A 1109 74 0.6316 0.0649 0.9730 3.65e-39 8aaa:A, 7b62:A, 7beh:E, 7bem:E, 8bec:B, 8bec:D, 7d2z:B, 7d30:B, 7dwy:A, 7dwy:B, 7dwy:C, 7e7b:A, 7e7b:B, 7e7b:C, 7f5g:C, 8j1q:C, 8j26:C, 7jji:C, 7jji:B, 7kmh:C, 7l2c:B, 7l4z:B, 7l4z:D, 7l4z:A, 7l4z:C, 7l4z:E, 7ldj:A, 7ly3:A, 7ly3:B, 7q0i:D, 8qh0:A, 7qur:A, 7qur:B, 7qur:C, 7qus:A, 7qus:B, 7qus:C, 7r6w:R, 7sn0:C, 7wd8:B, 7wgv:A, 7wgv:B, 7wgv:C, 7wk8:A, 7x08:A, 7x08:B, 7x08:C, 7x2l:E, 7x93:G, 7xtz:A, 7xtz:C, 7xtz:B, 7xu0:C, 7xu0:B, 7xu1:A, 7xu6:A, 7xu6:C, 7xu6:B, 7xwa:D, 7y0c:E, 7y0c:R, 7yck:A, 7z8o:A, 7zbu:A, 6zp2:A, 6zp2:C, 6zp2:B
9 7wuh:E 1044 74 0.6316 0.0690 0.9730 4.33e-39 7wuh:A, 7xu3:B, 7xu3:A, 7xu3:C, 6zb5:A, 6zb5:C, 6zb5:B
10 7tei:B 1042 74 0.6228 0.0681 0.9595 5.57e-39
11 7y42:A 968 74 0.6316 0.0744 0.9730 6.60e-39 7y42:B, 7y42:D
12 8bon:B 1070 74 0.6228 0.0664 0.9595 1.44e-38 8bon:A, 8bon:C, 7nd7:A, 7nd7:B, 7nd7:C, 8xut:B, 8xut:A
13 8xus:B 1063 74 0.5965 0.0640 0.9189 1.26e-36 8if2:B
14 8h3m:C 930 74 0.5965 0.0731 0.9189 1.45e-36
15 7c53:E 93 114 0.6053 0.7419 0.6053 1.58e-36
16 8hlc:A 1081 74 0.6140 0.0648 0.9459 2.33e-36 7e7d:A, 7e7d:B, 7e7d:C, 8h3e:A, 8h3e:B, 8h3e:C, 8hlc:B, 8hlc:C, 7odl:A, 7odl:B, 7odl:C, 7wgx:A, 7wgx:B, 7wgx:C, 6zb4:C, 6zb4:B, 6zb4:A, 6zoz:A, 6zoz:B, 6zoz:C
17 8tc0:B 1091 74 0.5702 0.0596 0.8784 3.28e-36 8tc0:A, 8tc0:C, 8tc1:C, 8tc1:A, 8tc1:B, 8tc5:C, 8tc5:A, 8tc5:B, 1zv8:A, 1zv8:C, 1zv8:E, 5zvm:A, 5zvm:B
18 7od3:A 1012 74 0.6053 0.0682 0.9324 1.45e-35 7od3:B, 7od3:C
19 8h0z:B 1045 74 0.5614 0.0612 0.8649 3.32e-35 8h0x:A, 8h0x:B, 8h0x:C, 8h0y:A, 8h0y:C, 8h0z:C, 8h14:B, 8h14:C, 8h14:A
20 8h10:A 1026 74 0.5614 0.0624 0.8649 3.80e-35 8h0y:B, 8h0z:A, 8h10:B, 8h10:C, 7zh1:A, 7zh1:B, 7zh1:C, 7zh2:A, 7zh2:B, 7zh2:C
21 8opo:A 1195 74 0.4035 0.0385 0.6216 1.35e-21 5kwb:A, 8opm:A, 8opm:B, 8opm:C, 8opn:A, 8opn:B, 8opn:C, 8opo:B, 8opo:C, 8y7y:A
22 7sbw:B 1196 94 0.4298 0.0410 0.5213 1.75e-21 6nzk:A, 6nzk:B, 6nzk:C, 7sb3:J, 7sb3:A, 7sb3:B, 7sb4:A, 7sb4:C, 7sb4:B, 7sbv:J, 7sbv:A, 7sbv:B, 7sbw:J, 7sbw:A, 7sbx:J, 7sbx:B, 7sbx:A, 7sby:J, 7sby:A, 7sby:B
23 8sak:A 1121 121 0.4474 0.0455 0.4215 4.52e-21
24 6nb3:A 1169 120 0.4474 0.0436 0.4250 2.10e-20 5gmq:A, 6j11:A, 6j11:B, 6j11:C, 7m5e:C, 7m5e:E, 7m5e:A, 6nb4:A, 6pxh:A, 6pxh:B, 6q04:C, 6q04:A, 6q04:B, 6q05:C, 6q05:A, 6q05:B, 6q06:C, 6q06:A, 6q06:B, 6q07:C, 6q07:A, 6q07:B, 7ymt:B, 7ymt:C, 7ymv:A, 7ymv:B, 7ymy:B, 7ymz:B, 7yn0:A, 7yn0:B, 7yn0:C
25 7y6t:A 1124 108 0.3947 0.0400 0.4167 2.35e-14
26 7y6t:C 1098 108 0.3947 0.0410 0.4167 2.77e-14
27 7w6m:A 1224 108 0.3947 0.0368 0.4167 2.92e-14 7w6m:C, 7w6m:B, 7w73:C, 7w73:A, 7y6t:B, 7y6u:A
28 6u7k:A 1064 108 0.4035 0.0432 0.4259 8.13e-14
29 6vv5:A 1097 108 0.3947 0.0410 0.4167 3.50e-13 6vv5:B, 6vv5:C
30 8fr7:A 1275 108 0.4123 0.0369 0.4352 1.35e-11 8fr7:C, 8fr7:B
31 7z36:B 446 81 0.1579 0.0404 0.2222 0.19 6h3a:A, 6h3a:F, 6qaj:A, 6qaj:B, 6qu1:A, 2yvr:A, 2yvr:B, 7z36:A
32 5kvu:A 738 96 0.2193 0.0339 0.2604 0.23 5kvu:B, 5kvu:C, 5kvu:D
33 7kh2:D 415 54 0.1228 0.0337 0.2593 0.60 7kh2:A, 7kh2:B, 7kh2:C
34 3u31:A 263 54 0.1842 0.0798 0.3889 1.5 3jwp:A, 3u3d:A
35 6s6b:K 1024 50 0.1316 0.0146 0.3000 1.6 6s8b:K, 6s8e:K, 6s91:K, 6sh8:K, 6shb:K, 6sic:K
36 5v2p:A 287 33 0.1053 0.0418 0.3636 3.6 4dey:A
37 6vxe:A 789 62 0.1491 0.0215 0.2742 3.8 6vxe:B, 6vxe:C, 6vxe:D, 6vxe:E, 6vxe:F, 6vxe:G, 6vxe:H
38 6o8c:A 636 43 0.1491 0.0267 0.3953 4.0 4iwo:A, 4iwp:A, 4iwq:A, 6rsr:A, 6rst:A, 6rsu:A
39 6uss:A 485 32 0.1228 0.0289 0.4375 4.0 6uss:B
40 7psl:A 600 111 0.2193 0.0417 0.2252 4.3 4myh:B, 7psl:B, 7psm:A, 7psm:B, 7psn:A, 7psn:B
41 1vyt:A 273 26 0.0965 0.0403 0.4231 5.2
42 6b0j:A 452 36 0.1140 0.0288 0.3611 5.6 6b0j:B, 6b0j:C, 6b0k:A, 6b0k:B, 6b0k:C, 6b1v:A, 6b1v:B, 6b1v:C, 6bia:A, 6bia:B, 6bia:C
43 6ze7:B 586 52 0.1228 0.0239 0.2692 5.8 7aa2:A, 7aa2:B, 6ze2:A, 6ze2:B, 6ze3:A, 6ze4:A, 6ze4:B, 6ze5:A, 6ze5:B, 6ze6:A, 6ze6:B, 6ze7:A
44 6hiv:DB 1111 49 0.1316 0.0135 0.3061 7.0 6hiw:DB, 6hiz:DB, 7pua:DB
45 6euo:C 354 47 0.1228 0.0395 0.2979 7.2 6euo:A, 6euo:B, 6euo:D, 6eur:A, 6eur:C, 6eur:D, 6exf:A, 6exf:C, 6exf:D, 6exh:A, 6exh:B, 6exh:C, 6exh:D, 6f9p:A, 6f9p:C, 6f9p:D
46 4u8u:O 213 22 0.1053 0.0563 0.5455 7.5 4u8u:s, 4u8u:d
47 7pr1:A 587 39 0.1053 0.0204 0.3077 7.6 7pr1:B, 7pru:A, 7pru:B
48 8duj:G 3933 49 0.1140 0.0033 0.2653 8.3
49 7eof:B 181 122 0.2895 0.1823 0.2705 9.8
50 7t65:A 4252 40 0.0965 0.0026 0.2750 9.9 7t64:A, 7t64:B, 7t64:C, 7t64:D, 7t65:B, 7t65:C, 7t65:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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