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BioLiP
>protein
VKYLYLRAVGGELAPKIGPLGLSPKKVGEDIAKATKEFKGIKVTVQLKIQNRQAAASVVPSASSLVITALKEPPRDRKKD
KNVKHSGNIQLDEIIEIARQMRDKSFGRTLASVTKEILGTAQSVGCRVDFKNPHDIIEGINAGEIEIP

The query sequence (length=148) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8cf5:Ee 160 154 1.0000 0.9250 0.9610 5.64e-103 8aaf:z, 8agt:z, 8agu:z, 8agv:z, 8agw:z, 8agx:z, 8agz:z, 8ccs:Ee, 8cdl:Ee, 8cdr:Ee, 8ceh:Ee, 8cg8:Ee, 8cgn:Ee, 8civ:Ee, 8cku:Ee, 8cmj:Ee, 5dge:m2, 5dgf:m2, 6gq1:P2, 6gqb:P2, 6gqv:P2, 8hfr:KM, 3j16:H, 3j77:62, 3j78:62, 5jcs:K, 5juo:P, 5jup:P, 5jus:P, 5jut:P, 5juu:P, 8k2d:LK, 8k82:LK, 6oig:s, 7osa:uL11, 7osm:uL11, 6r84:P, 6r86:P, 6r87:P, 7rr5:P2, 5tgm:m2, 7ug6:q, 7uoo:8, 7uqb:8, 7uqz:8, 7v08:8, 4v4b:BK, 4v6i:BJ, 4v7h:BK, 4v7r:DL, 6xiq:P2, 8y0u:P2, 6ylg:q, 6ylh:q, 7z34:a
2 8idt:y 165 154 0.6959 0.6242 0.6688 6.69e-72 7a01:M2, 5a8l:G, 5aj0:Aq, 9bdn:AL12, 9bdp:AL12, 8bhf:f1, 8bpo:r2, 8btk:Bt, 6d90:t, 6d9j:t, 9f1b:Bt, 9f1c:Bt, 9f1d:Bt, 8fkr:BA, 8fks:BA, 8fkt:BA, 8fku:BA, 8fkv:BA, 8fkw:BA, 8fkx:BA, 8fky:BA, 8fkz:BA, 8fl0:BA, 8fl2:BA, 8fl3:BA, 8fl4:BA, 8fl6:BA, 8fl7:BA, 8fl9:BA, 8fla:BA, 8flb:BA, 8flc:BA, 6frk:4, 6ftg:t, 6fti:t, 6ftj:t, 8g5z:LK, 8g60:LK, 8g6j:LK, 6gz3:Aq, 6gz4:Aq, 6gz5:Aq, 6hcf:t3, 6hcj:u3, 6hcm:t3, 6hcq:u3, 8idy:y, 8ine:y, 8inf:y, 8ink:y, 8ipd:y, 8ipx:y, 8ipy:y, 8ir1:y, 8ir3:y, 3j7p:K, 3j92:t, 3jag:t, 3jah:t, 3jai:t, 3jaj:K, 3jan:K, 8k2c:Lt, 7ls1:k, 7ls2:k, 5lzs:t, 5lzt:t, 5lzu:t, 5lzv:t, 5lzw:t, 5lzx:t, 5lzy:t, 5lzz:t, 6mtd:t, 6mte:t, 7nwg:u3, 7nwh:t, 7nwi:t, 7o7y:Bt, 7o7z:Bt, 7o80:Bt, 7o81:Bt, 6olg:Aq, 8p2k:Bt, 8q87:Bt, 6r5q:t, 6r6g:t, 6r6p:t, 6r7q:t, 8scb:t, 6sgc:t2, 6t59:t3, 4v5z:Bi, 4v6x:CK, 8xsx:LK, 8xsy:Lt, 8xsz:Lt, 8yoo:Lt, 8yop:Lt, 6zm7:Lt, 6zme:Lt, 6zmi:Lt, 6zmo:Lt, 6zvk:M2
3 4v6w:CK 158 154 0.6959 0.6519 0.6688 7.61e-71
4 8pv1:LK 158 154 0.6959 0.6519 0.6688 1.58e-67 8i9t:LK, 8i9v:LK, 8i9w:LK, 8i9x:LK, 8i9y:LK, 8i9z:LK, 8ia0:LK, 7olc:LK, 7old:LK, 8oo0:LK, 8pv2:LK, 8pv3:LK, 8pv4:LK, 8pv5:LK, 8pv6:LK, 8pv7:LK, 8pv8:LK, 8pvk:LK, 8pvl:LK, 7z3n:LK, 7z3o:LK
5 5an9:D 166 150 0.6216 0.5542 0.6133 3.41e-59 5anb:D, 5anc:D, 6qkl:D
6 4v3p:LJ 128 127 0.5541 0.6406 0.6457 4.73e-52 4v7e:CK
7 4v8m:BM 138 132 0.5068 0.5435 0.5682 7.10e-49
8 8c3a:12 63 61 0.3243 0.7619 0.7869 1.04e-29 8cq7:12, 8cqw:12, 8cre:12
9 6n8j:K 147 61 0.3649 0.3673 0.8852 1.15e-27 6n8m:L, 6n8n:L, 6n8o:L
10 5d8h:C 158 149 0.3243 0.3038 0.3221 3.82e-15 5dar:C, 5dar:F
11 4v4n:AH 134 121 0.2973 0.3284 0.3636 9.96e-14 4v6u:BH
12 7toq:AL12 38 65 0.1824 0.7105 0.4154 1.26e-04 7tor:AL12
13 4v9f:I 145 145 0.2635 0.2690 0.2690 0.001 3cc2:I, 3cc4:I, 3cc7:I, 3cce:I, 3ccj:I, 3ccl:I, 3ccm:I, 3ccq:I, 3ccr:I, 3ccs:I, 3ccu:I, 3ccv:I, 3cd6:I, 3cma:I, 3cme:I, 3g4s:I, 3g6e:I, 3g71:I, 3i55:I, 3i56:I, 2otj:I, 2otl:I, 2qa4:I, 2qex:I, 1s72:I, 1vq4:I, 1vq5:I, 1vq6:I, 1vq7:I, 1vq8:I, 1vq9:I, 1vqk:I, 1vql:I, 1vqm:I, 1vqn:I, 1vqo:I, 1vqp:I, 1yhq:I, 1yi2:I, 1yij:I, 1yit:I, 1yj9:I, 1yjn:I, 1yjw:I
14 8fmw:AK 139 126 0.2500 0.2662 0.2937 0.016 8fn2:K
15 6gaw:BK 176 126 0.2365 0.1989 0.2778 0.035 7a5f:J3, 7a5g:J3, 7a5h:J, 7a5i:J3, 7a5j:J, 7a5k:J3, 5aj4:BK, 8any:J, 6gb2:BK, 6i9r:J, 3j7y:J, 3j9m:J, 8k2a:LK, 8k2b:LK, 7l08:J, 7l20:J, 7nqh:BK, 7nql:BK, 7nsh:BK, 7nsi:BK, 7nsj:BK, 6nu2:J, 6nu3:J, 7o9k:J, 7o9m:J, 7odr:J, 7ods:J, 7odt:J, 7of0:J, 7of2:J, 7of3:J, 7of4:J, 7of5:J, 7of6:J, 7of7:J, 7og4:XJ, 7oi6:J, 7oi7:J, 7oi8:J, 7oi9:J, 7oia:J, 7oib:J, 7oic:J, 7oid:J, 7oie:J, 8oin:BQ, 8oiq:BQ, 8oir:BQ, 8oit:BQ, 5ool:J, 5oom:J, 7pd3:J, 8pk0:J, 7po4:J, 7qi4:J, 7qi5:J, 7qi6:J, 8qsj:J, 8qu1:J, 8qu5:J, 4v19:K, 6vlz:J, 6vmi:J, 8xt0:LK, 8xt1:LK, 8xt2:LK, 8xt3:LK, 6ydp:BK, 6ydw:BK, 6zm5:J, 6zm6:J, 6zs9:XJ, 6zsa:XJ, 6zsb:XJ, 6zsc:XJ, 6zsd:XJ, 6zse:XJ, 6zsg:XJ
16 2zja:A 700 70 0.1419 0.0300 0.3000 0.21 2zj5:A
17 7xlz:B 246 66 0.1419 0.0854 0.3182 1.0 7xlz:A
18 6pej:A 257 70 0.1284 0.0739 0.2714 1.9 6pej:B, 6pej:C, 6pej:D
19 3cf5:F 144 44 0.0946 0.0972 0.3182 2.4 3dll:F, 5dm6:F, 5dm7:F, 4io9:F, 4ioa:F, 4ioc:F, 5jvg:F, 3pio:F, 3pip:F, 1sm1:G, 4v49:BG, 4v4a:BG, 4v4g:BJ, 4v4g:DJ, 4v4g:FJ, 4v4g:HJ, 4v4g:JJ, 1xbp:G, 2zjp:F, 2zjq:F, 2zjr:F
20 7kc0:A 1004 42 0.1014 0.0149 0.3571 4.9 3iay:A, 6p1h:A
21 5d8b:G 147 42 0.0878 0.0884 0.3095 5.0 5a9z:AJ, 5aa0:AJ, 6c5l:BK, 6c5l:DK, 3cjt:B, 3cjt:F, 3cjt:J, 3cjt:N, 5d8b:CB, 6gsl:48, 5hau:1K, 5hau:2K, 5imq:3, 5imr:3, 5j8b:K, 4v4x:BL, 4v4y:BL, 4v4z:BL, 4v5e:BK, 4v5e:DK, 4v5f:BK, 4v5f:DK, 4v5j:BK, 4v5j:DK, 4v5m:BK, 4v5n:BK, 4v67:BK, 4v67:DK, 4v68:BL, 4v6f:DL, 4v9h:BK, 4v9j:BK, 4v9j:DK, 4v9k:BK, 4v9k:DK, 4v9l:BK, 4v9l:DK, 4v9m:BK, 4v9m:DK, 4v9n:BK, 4v9n:DK, 4w29:BK, 4w29:DK, 4w2e:K, 4wpo:AL, 4wpo:CL, 4wqf:AL, 4wqf:CL, 4wqu:AL, 4wqu:CL, 4wqy:AL, 4wqy:CL, 4xej:AL11, 4xej:BL11, 5zlu:f
22 4j1x:C 195 51 0.1081 0.0821 0.3137 7.0 2bnm:A, 2bnm:B, 2bnn:A, 2bnn:B, 2bno:A, 2bno:B, 4j1w:A, 4j1w:B, 4j1w:C, 4j1x:A, 4j1x:B, 3scf:A, 3scf:B, 3scf:C, 3scg:A, 3scg:B, 3scg:C, 3sch:A, 3sch:B, 1zz7:A, 1zz7:B, 1zz8:A, 1zz8:B, 1zz8:C, 1zz9:A, 1zz9:B, 1zz9:C, 1zzb:A, 1zzb:B, 1zzc:A, 1zzc:B
23 6xyw:Ai 138 43 0.0878 0.0942 0.3023 9.8

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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