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BioLiP
>protein
VKLANPLYTEWILEAIKKVKKQKQRPSEERICNAVSSSHGLDRKTVLEQLELSVKDGTILKVSNKGLNSYKDPDNPG

The query sequence (length=77) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7y43:A 79 76 0.9870 0.9620 1.0000 1.49e-51 8h7a:A, 8h7a:B, 8h7a:E, 8h7a:F
2 6lui:A 71 68 0.3377 0.3662 0.3824 5.25e-12
3 4j0h:A 470 28 0.1558 0.0255 0.4286 0.12 4j0h:B, 4j0j:A, 4j0j:B, 4j0k:A, 4j0k:B, 4jui:A, 4jui:B, 3wa7:A
4 1iq8:A 577 71 0.2597 0.0347 0.2817 0.73 1iq8:B, 1it7:A, 1it7:B, 1it8:A, 1it8:B, 1j2b:A, 1j2b:B
5 6zu5:ST0 139 51 0.2597 0.1439 0.3922 2.3
6 7bbr:A 310 45 0.1688 0.0419 0.2889 3.5 7bcn:A, 7bco:A, 7bco:B, 7bcp:A, 7bcr:A
7 4dyn:A 437 47 0.1558 0.0275 0.2553 4.2 5b7b:A, 5b7b:C, 5b7b:D, 4bbl:D, 4bbl:F, 4bbl:H, 4bbl:J, 4bbl:L, 4bbl:N, 4bbl:P, 4bbl:R, 4bbl:T, 4bbl:V, 4bbl:X, 4bbl:A, 4bbl:C, 4bbl:E, 4bbl:G, 4bbl:I, 4bbl:K, 4bbl:M, 4bbl:O, 4bbl:Q, 4bbl:S, 4bbl:U, 4dya:A, 4dya:B, 4dyb:A, 4dyb:B, 4dyn:B, 4dyp:A, 4dyp:B, 6h9g:A, 6h9g:C, 6i54:A, 6i54:C, 6i7b:A, 6i7b:C, 6i7m:A, 6i7m:C, 3ro5:A, 3ro5:B, 3tg6:A, 3tg6:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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