BioLiP

>protein
VHPITYYPVDTQRLVRSNAERIRHKPYAHYFNPDVAVPEEVFAALKAPLEPEQVLGTSSTELNRLLEPGYLEGETGYCGL
PDGAGYTSSLVRFPGATPEMFRWWFWWHSFEPERYSLWHPWCHADIWRTDPETETAPNLTDEQRYVGSTHHINEYIGQDP
LDIEITFIDPARWGFDADGFAAAGIGAHACGSVLMKGSHMRLATMVHLARITDDGFELRSRYWIADRAEPRHDPVAGIAQ
LTTVPGFSGERQAYEQLVHDQTEFNHLATFLPDIYQEFGP

The query sequence (length=280) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	5xe5:A	280	280	1.0000	1.0000	1.0000	0.0	5xe5:B, 5xey:B
2	3hwp:A	288	283	0.3821	0.3715	0.3781	1.17e-56	3hwp:B
3	1fw2:A	257	67	0.0714	0.0778	0.2985	1.1	7ezz:A, 7ezz:B, 1qd6:C, 1qd6:D
4	4v4c:A	875	75	0.0857	0.0274	0.3200	4.1	4v4c:C, 4v4c:E, 4v4c:G, 4v4c:I, 4v4c:K, 4v4c:M, 4v4c:O, 4v4c:Q, 4v4c:S, 4v4c:U, 4v4c:W, 4v4d:A, 4v4d:C, 4v4d:E, 4v4d:G, 4v4d:I, 4v4d:K, 4v4d:M, 4v4d:O, 4v4d:Q, 4v4d:S, 4v4d:U, 4v4d:W, 4v4e:A, 4v4e:C, 4v4e:E, 4v4e:G, 4v4e:I, 4v4e:K, 4v4e:M, 4v4e:O, 4v4e:Q, 4v4e:S, 4v4e:U, 4v4e:W
5	7cih:C	311	90	0.0821	0.0740	0.2556	4.6	7ci0:A, 7ci0:B, 7ci0:C, 7ci0:D, 7cih:A, 7cih:B, 7cih:D, 7cip:A, 7cip:B, 7cip:C, 7cip:D, 6keu:A, 6keu:B, 6keu:C, 6keu:D, 6kf1:A, 6kf1:B, 6kf1:C, 6kf1:D, 6kf5:A, 6kf5:B, 6kf5:C, 6kf5:D, 6kf7:A, 6kf7:B, 6kf7:C, 6kf7:D, 7w8n:A, 7w8n:B, 7w8n:C, 7w8n:D
6	8k7x:A	673	37	0.0429	0.0178	0.3243	7.8	8k7y:A, 8k7y:E

[Back]