BioLiP

>protein
VGTWDLDLKTWALDWSDTARTLLGIGQDQPASYDLFLSRLEPDDRERVESAIKRVSERGGGFDVSFRVAGTSNAGQWIRA
RAGLIRDEAGTARHLSGIFLDIDEEKQVEGALRTRETHLRSILHTIPDAMIVIDGHGIIQLFSTAAERLFGWSELEAIGQ
NVNILMPEPDRSRHDSYISRYRTTSDPHIIGIGRIVTGKRRDGTTFPMHLSIGEMQSGGEPYFTGFVRDLTEHQQTQARL
QELQSELV

The query sequence (length=248) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	8js5:B	253	248	1.0000	0.9802	1.0000	0.0	2cmn:A, 1dp6:A, 1dp8:A, 1dp9:A, 1drm:A, 8js5:A, 8js5:C, 8js5:D, 8js5:E, 8js5:F, 8js5:G, 8js5:H, 8js5:I, 8js5:J, 8js6:A, 8js6:B, 8js6:C, 8js6:D, 8js6:E, 8js6:F, 8js6:G, 8js6:H, 8js6:I, 8js6:J, 8js7:A, 8js7:B, 8js7:C, 8js7:D, 8js7:E, 8js7:F, 8js7:G, 8js7:H, 8js7:I, 8js7:J, 1lsv:A, 1lsw:A, 1lsx:A, 1lt0:A, 2owh:A, 2owj:A, 2vv6:A, 2vv6:D, 2vv6:B, 2vv6:C, 2vv7:A, 2vv7:B, 2vv7:C, 2vv7:D, 2vv8:A, 2vv8:D, 2vv8:B, 2vv8:C, 1xj2:A, 1xj3:A, 1xj4:A, 1xj4:B, 1xj6:A, 1xj6:B, 1y28:A
2	1d06:A	130	125	0.2863	0.5462	0.5680	3.00e-47	1ew0:A
3	1s66:L	119	101	0.1089	0.2269	0.2673	1.59e-11	1s66:U, 1s67:L, 1s67:U, 1v9y:A, 1v9y:B, 1v9z:A, 1v9z:B, 1vb6:A, 1vb6:B
4	4gcz:B	378	124	0.1694	0.1111	0.3387	6.47e-11	4gcz:A
5	8a6x:B	368	126	0.1734	0.1168	0.3413	7.08e-10	8a3u:A, 8a52:A, 8a52:B, 8a6x:A, 8a7f:A, 8a7f:B, 8a7h:A, 8a7h:B
6	6ph4:B	460	175	0.1774	0.0957	0.2514	5.41e-05	5epv:A, 5epv:B, 5epv:C, 5epv:D, 6ph2:A, 6ph2:B, 6ph2:C, 6ph2:D, 6ph3:A, 6ph3:B, 6ph3:C, 6ph3:D, 6ph4:A, 6pps:A, 6pps:B, 6pps:C, 6pps:D, 3t50:A, 3t50:B
7	6dgj:A	102	42	0.0685	0.1667	0.4048	0.003
8	6hmj:A	359	134	0.1411	0.0975	0.2612	0.005	6hmj:B, 6hmj:C, 6hmj:D
9	5xgd:A	548	128	0.1411	0.0639	0.2734	0.067	8pps:A, 8pps:B, 5xge:A
10	7a6p:A	149	125	0.1210	0.2013	0.2400	0.070	7a6p:B
11	3bwl:A	125	127	0.1129	0.2240	0.2205	0.12	3bwl:B, 3bwl:C, 3bwl:D
12	3ewk:A	227	89	0.0968	0.1057	0.2697	0.15
13	7yx0:A	166	55	0.0685	0.1024	0.3091	0.18	7yx0:C
14	2mwg:A	261	52	0.0565	0.0536	0.2692	0.32	2mwg:B, 2pr5:A, 2pr5:B, 2pr6:A, 2pr6:B
15	1u6r:A	380	29	0.0565	0.0368	0.4828	1.1	2crk:A, 1u6r:B
16	6s0y:A	120	58	0.0605	0.1250	0.2586	3.7	6s0y:B
17	2yvx:A	442	104	0.1008	0.0566	0.2404	3.9	8h5e:A, 4u9n:B, 4wib:B, 5x9g:A, 5x9g:B, 5x9g:C, 5x9g:D, 5x9h:A, 5x9h:B, 2yvx:B, 2yvx:C, 2yvx:D, 2yvy:A, 2zy9:A, 2zy9:B
18	2qkd:A	384	103	0.1210	0.0781	0.2913	4.8
19	8tpu:S8	317	50	0.0565	0.0442	0.2800	5.3
20	3oft:A	396	35	0.0565	0.0354	0.4000	6.4	3oft:B, 3oft:C, 3ofu:A, 3ofu:B, 3ofu:C, 3ofu:D, 3ofu:E, 3ofu:F
21	2gks:B	529	48	0.0605	0.0284	0.3125	6.5	2gks:A
22	7ok0:B	1109	36	0.0685	0.0153	0.4722	6.7	7oq4:B, 7oqy:B
23	5odv:A	207	44	0.0605	0.0725	0.3409	6.9	5odv:B, 5odv:C, 5odv:D, 5odv:E, 5odv:F, 5odv:G, 5odv:H, 5odv:I, 5odv:J, 5odv:K, 5odv:L, 5odv:M, 5odv:N, 5odv:O, 5odv:P, 5odv:Q, 5odv:R, 5odv:S, 5odv:T, 5odv:U, 5odv:V, 5odv:W, 5odv:X
24	4yiv:A	374	32	0.0484	0.0321	0.3750	8.4
25	3a28:C	257	33	0.0524	0.0506	0.3939	9.3	3a28:D, 3a28:A, 3a28:B, 3a28:E, 3a28:F, 3a28:G, 3a28:H
26	8onh:I	343	46	0.0524	0.0379	0.2826	9.9

[Back]