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BioLiP
>protein
VGDLVIEESTYTARLKALELTYKEFELLKYLAQHAGRVFTRAQLLQEVWGYDFGTRTVDVHVRRLRAKLGPEYDSMIGTV
RNVGYKFVRP

The query sequence (length=90) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8hig:A 98 92 0.9778 0.8980 0.9565 1.33e-56 8hig:B, 8hml:A, 8hml:B
2 8hih:O 217 94 0.8556 0.3548 0.8191 2.79e-49 8hih:P, 8hih:N, 8hih:Q
3 6cqg:A 98 91 0.5111 0.4694 0.5055 1.53e-19
4 2oqr:A 226 86 0.4111 0.1637 0.4302 4.10e-17
5 2z33:A 104 75 0.4000 0.3462 0.4800 8.25e-17 1gxp:A, 1gxp:B, 1gxp:E, 1gxp:F
6 2gwr:A 225 75 0.4333 0.1733 0.5200 1.13e-16 3nhz:B, 3nhz:C, 3nhz:D
7 7e1b:A 209 88 0.5000 0.2153 0.5114 2.12e-15 7e1b:B, 7e1b:C, 7e1b:H, 7e1b:D, 7e1b:E, 7e1b:F, 7e1b:G, 7e1h:A, 7e1h:B, 7e1h:E
8 1ys6:B 227 93 0.4556 0.1806 0.4409 3.56e-13 1ys6:A, 1ys7:A, 1ys7:B
9 4b09:A 218 90 0.4222 0.1743 0.4222 3.33e-10 4b09:B, 4b09:C, 4b09:D, 4b09:E, 4b09:F, 4b09:G, 4b09:I, 4b09:K
10 5x5l:E 98 71 0.2889 0.2653 0.3662 1.37e-09 5x5l:B, 5x5l:H, 5x5l:A
11 8uvx:A 222 95 0.3556 0.1441 0.3368 1.40e-09 8uvk:A, 8uvk:B, 8uvx:B
12 5ed4:E 224 93 0.3333 0.1339 0.3226 8.91e-09 5ed4:A, 5ed4:B, 5ed4:F, 2pmu:E
13 4nhj:A 102 73 0.3444 0.3039 0.4247 9.60e-09 4nhj:B
14 8jo2:H 219 75 0.3222 0.1324 0.3867 1.70e-06 8jo2:I, 4s04:A, 4s04:B, 4s04:E, 4s04:F, 4s05:A, 4s05:B, 3w9s:A, 3w9s:B
15 5ju7:A 107 82 0.3000 0.2523 0.3293 6.36e-05
16 4kny:B 226 75 0.2889 0.1150 0.3467 6.64e-05 4kfc:A, 4kfc:B, 4kny:A, 1zh2:A, 1zh2:B, 1zh4:A, 1zh4:B
17 7lza:A 219 70 0.2778 0.1142 0.3571 2.74e-04 7lz9:A
18 8ojl:A 777 51 0.2667 0.0309 0.4706 0.62 9cc0:A, 9cc0:C, 9cc0:E, 9cc0:B, 9cc0:D, 9cc0:F, 9cc3:B, 9cc3:C, 9cc3:D, 9cc3:E, 7krz:A, 7krz:C, 7krz:B, 7krz:D, 7krz:E, 7krz:F, 7ksl:B, 7ksl:A, 7ksl:F, 7ksm:B, 7ksm:A, 7ksm:C, 7ksm:D, 7ksm:E, 7ksm:F, 7nfy:A, 7nfy:B, 7nfy:C, 7nfy:E, 7nfy:D, 7nfy:F, 7ng4:B, 7ng4:C, 7ng4:D, 7ng4:A, 7ng4:E, 7ng4:F, 7ng5:A, 7ng5:D, 7ng5:B, 7ng5:C, 7ng5:E, 7ng5:F, 7ngc:A, 7ngc:B, 7ngc:C, 7ngc:D, 7ngc:E, 7ngc:F, 7ngf:A, 7ngf:F, 7ngf:B, 7ngf:C, 7ngf:D, 7ngf:E, 7ngl:A, 7ngl:B, 7ngl:C, 7ngl:D, 7ngl:E, 7ngl:F, 7ngp:A, 7ngp:B, 7ngp:C, 7ngp:D, 7ngp:E, 7ngp:F, 7ngq:A, 7ngq:B, 7ngq:C, 7ngq:D, 7ngq:E, 7ngq:F, 8ojl:B, 8ojl:C, 8ojl:D, 8ojl:E, 8ojl:F, 8oka:A, 8oka:B, 8oka:C, 8oka:D, 8oka:E, 8oka:F, 8om7:A, 8om7:B, 8om7:C, 8om7:D, 8om7:E, 8om7:F, 8ovf:A, 8ovf:B, 8ovf:C, 8ovf:D, 8ovf:E, 8ovf:F, 7oxo:A, 7oxo:B, 7oxo:C, 7oxo:D, 7oxo:E, 7oxo:F, 7p09:A, 7p09:B, 7p09:D, 7p09:C, 7p09:E, 7p0b:A, 7p0b:B, 7p0b:C, 7p0b:D, 7p0b:E, 7p0b:F, 7p0m:A, 7p0m:B, 7p0m:C, 7p0m:D, 7p0m:E, 6wzv:A, 6wzv:B, 6x1m:A, 6x1m:B, 6x27:A, 6x27:B, 6x27:C, 6x27:D, 6x27:E, 6x27:F, 6x27:G, 6x27:H, 6x27:I, 6x27:J, 6x27:K, 6x27:L
19 8f29:D 473 57 0.1889 0.0359 0.2982 1.3 4b2q:D, 4b2q:F, 4b2q:d, 4b2q:f, 6b8h:D, 6b8h:F, 6b8h:Y, 6b8h:c, 6cp3:D, 6cp3:F, 6cp6:D, 6cp6:F, 8f29:F, 8f2k:E, 8f2k:F, 8f39:E, 8f39:F, 8fl8:E, 8fl8:F, 2hld:D, 2hld:F, 2hld:M, 2hld:N, 2hld:O, 2hld:V, 2hld:X, 5lqx:D, 5lqx:E, 5lqx:F, 5lqy:D, 5lqy:E, 5lqy:F, 5lqz:D, 5lqz:E, 5lqz:F, 7md2:D, 7md3:D, 3oe7:D, 3oe7:F, 3oe7:M, 3oe7:N, 3oe7:O, 3oe7:V, 3oe7:X, 3oee:D, 3oee:F, 3oee:M, 3oee:O, 3oee:V, 3oee:X, 3oeh:D, 3oeh:F, 3oeh:M, 3oeh:O, 3oeh:V, 3oeh:X, 3ofn:D, 3ofn:F, 3ofn:M, 3ofn:O, 3ofn:V, 3ofn:X, 7tjs:D, 7tju:D, 7tju:E, 7tjv:D, 7tjv:F, 7tjw:D, 7tjw:F, 7tjx:D, 7tjx:F, 2wpd:D, 2wpd:F, 2xok:D, 2xok:F, 3zia:D, 3zia:E, 3zia:F, 3zia:N, 3zia:O, 3zia:P, 3zry:D, 3zry:F
20 8h9t:D 442 69 0.2222 0.0452 0.2899 1.6 8h9p:D
21 1mab:B 477 69 0.2222 0.0419 0.2899 1.7 4asu:D, 4asu:E, 4asu:F, 1bmf:D, 1bmf:F, 2ck3:D, 2ck3:E, 2ck3:F, 1cow:D, 1cow:E, 1cow:F, 1e1q:D, 1e1q:E, 1e1q:F, 1e1r:D, 1e1r:F, 1e79:D, 1e79:F, 1efr:E, 1efr:D, 1efr:F, 2f43:B, 1h8e:D, 1h8e:E, 1h8e:F, 1h8h:D, 1h8h:F, 8h9e:E, 8h9e:F, 8h9e:D, 8h9i:E, 8h9i:F, 8h9i:D, 8h9l:E, 8h9l:F, 8h9l:D, 8h9p:E, 8h9p:F, 8h9s:E, 8h9s:F, 8h9s:D, 8h9t:E, 8h9t:F, 8h9u:E, 8h9u:F, 8h9u:D, 8h9v:F, 6j5i:D, 6j5i:F, 6j5j:D, 6j5j:F, 6j5k:D, 6j5k:F, 6j5k:AD, 6j5k:AF, 6j5k:BD, 6j5k:BF, 6j5k:CD, 6j5k:CF, 2jdi:D, 2jdi:F, 2jiz:D, 2jiz:F, 2jiz:K, 2jiz:M, 2jj1:D, 2jj1:F, 2jj1:K, 2jj1:M, 2jj2:D, 2jj2:F, 2jj2:L, 2jj2:K, 2jj2:M, 8ki3:E, 8ki3:D, 8ki3:F, 1nbm:D, 1nbm:F, 1ohh:D, 1ohh:F, 4tsf:E, 4tsf:F, 4tsf:D, 4tt3:F, 4tt3:E, 4tt3:D, 6tt7:D, 6tt7:F, 2v7q:D, 2v7q:F, 1w0j:D, 1w0j:E, 1w0j:F, 1w0k:D, 1w0k:E, 1w0k:F, 2w6e:D, 2wss:D, 2wss:F, 2wss:M, 2wss:O, 2xnd:D, 2xnd:F, 4yxw:D, 4yxw:E, 4yxw:F, 6yy0:D, 6yy0:E, 6yy0:F, 4z1m:F, 4z1m:E, 4z1m:D, 6z1r:E, 6z1r:D, 6z1r:F, 6z1u:E, 6z1u:D, 6z1u:F, 6zpo:D, 6zpo:E, 6zpo:F, 6zqm:E, 6zqm:D, 6zqm:F, 6zqn:E, 6zqn:D, 6zqn:F
22 8h9v:D 432 69 0.2222 0.0463 0.2899 1.8
23 7aqq:y 268 65 0.1889 0.0634 0.2615 2.2 7ar7:y, 7ar8:y, 7arb:y, 8bef:y, 8bpx:y, 8bq5:y, 8bq6:y
24 2no0:A 242 58 0.1889 0.0702 0.2931 4.0 2a2z:A, 2a2z:C, 2a30:A, 2a30:C, 2a7q:A, 3hp1:A, 3ipx:A, 3ipy:A, 3ipy:B, 4jlj:A, 4jlj:B, 4jlk:A, 4jlk:B, 4jlm:A, 4jlm:B, 4jln:A, 4jln:B, 4kcg:A, 4kcg:B, 3kfx:A, 3kfx:B, 4l5b:A, 4l5b:B, 3mjr:A, 3mjr:B, 3mjr:C, 5mqj:A, 5mqj:B, 5mqj:C, 5mqj:D, 5mql:A, 5mql:B, 5mql:C, 5mql:D, 5mqt:A, 5mqt:B, 5mqt:C, 5mqt:D, 2no0:B, 2no1:A, 2no1:B, 2no6:A, 2no6:B, 2no7:A, 2no7:B, 2no9:A, 2no9:B, 2noa:A, 2noa:B, 8ooj:A, 8ooj:B, 8ooj:C, 8ooj:D, 1p5z:B, 1p60:A, 1p60:B, 1p61:B, 1p62:B, 4q18:A, 4q18:B, 4q19:A, 4q19:B, 4q1a:A, 4q1a:B, 4q1b:A, 4q1b:B, 4q1c:A, 4q1c:B, 4q1d:A, 4q1d:B, 4q1e:A, 4q1e:B, 4q1f:A, 4q1f:B, 3qej:A, 3qej:B, 3qen:A, 3qen:B, 3qeo:A, 3qeo:B, 2qrn:A, 2qrn:B, 2qrn:C, 2qrn:D, 2qro:A, 2qro:B, 2qro:C, 2qro:D, 2zi3:A, 2zi3:B, 2zi4:A, 2zi5:B, 2zi6:B, 2zi9:A, 2zi9:B, 7zi1:A, 7zi2:A, 7zi3:A, 7zi5:A, 7zi6:A, 7zi7:A, 7zi8:A, 7zi9:A, 7zia:A, 7zib:A
25 8e73:G2 258 29 0.1222 0.0426 0.3793 4.1 6x89:G2
26 6tv9:A 372 51 0.1778 0.0430 0.3137 5.2 6tv9:B, 6tv9:C, 6tv9:D, 6tv9:E, 6tv9:F, 6tv9:G, 6tv9:H
27 7dz9:B 260 28 0.1000 0.0346 0.3214 5.6 7dz9:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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