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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
TYAPLELFDTDRLLDQDERDIAATVRQFVDTRLKPNVEGWFESATLPSELAKEFGNLGVLGMHLQGYGCAGTNAVSYGLA
CMELEAGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRTRARRDGSDWILNG
TKMWITNGNLADVATVWAQTDDGIRGFLVPTDTPGFTANEIHRKLSLRASVTSELVLDNVRLPASAQLPLAEGLSAPLSC
LNEARFGIVFGALGAARDSLETTIAYTQSREVFDKPLSNYQLTQEKLANMTVELGKGMLLAIHLGRIKDAEGVRPEQISL
GKLNNVREAIAIARECRTLLGGSGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGKALTGKAAFR

The query sequence (length=386) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3swo:A 388 386 1.0000 0.9948 1.0000 0.0 3swo:D, 3swo:B, 3swo:C
2 3sf6:A 387 382 0.6943 0.6925 0.7016 0.0
3 2eba:A 380 383 0.5363 0.5447 0.5405 8.04e-137 2eba:D, 2eba:C, 2eba:E, 2eba:F, 2eba:G, 2eba:H, 2eba:I
4 2r0m:A 390 375 0.4637 0.4590 0.4773 1.17e-114 2r0n:A, 1siq:A, 1sir:A
5 3gqt:C 385 387 0.4378 0.4390 0.4367 3.47e-99 3d6b:C, 3eon:C, 3gnc:A, 3gnc:B, 3gnc:C, 3gnc:D, 3gqt:A, 3gqt:B
6 4n5f:A 378 377 0.3679 0.3757 0.3767 3.40e-71 4n5f:B
7 4m9a:B 376 377 0.3705 0.3803 0.3793 2.08e-67 4m9a:A
8 7y0a:C 387 385 0.3446 0.3437 0.3455 3.44e-65 1jqi:A, 1jqi:B, 8sgs:A, 8sgs:B, 8sgs:C, 8sgs:D, 2vig:A, 2vig:B, 2vig:C, 2vig:D, 2vig:E, 2vig:F, 2vig:G, 2vig:H, 7y0a:A, 7y0a:B, 7y0a:D, 7y0b:A, 7y0b:B, 7y0b:C, 7y0b:D
9 2ix6:A 416 393 0.3212 0.2981 0.3155 4.17e-65 2ix5:A, 2ix5:B, 2ix5:C, 2ix5:D, 2ix6:C, 2ix6:F, 2ix6:B, 2ix6:E, 2ix6:D
10 5ol2:F 378 362 0.3238 0.3307 0.3453 1.21e-58 5ol2:C
11 5lnx:D 374 373 0.3187 0.3289 0.3298 9.37e-56 5lnx:A, 5lnx:B, 5lnx:C, 5lnx:E, 5lnx:F, 5lnx:G, 5lnx:H
12 4l1f:A 380 376 0.2979 0.3026 0.3059 1.30e-54 4l1f:B
13 2dvl:A 370 372 0.3342 0.3486 0.3468 7.68e-53 2dvl:B
14 7szv:A 372 378 0.3031 0.3145 0.3095 9.55e-53 7szv:B
15 1buc:A 383 375 0.3135 0.3159 0.3227 2.40e-50 1buc:B
16 2jif:A 381 384 0.2979 0.3018 0.2995 6.99e-50 2jif:C, 2jif:B, 2jif:D
17 7w0j:E 382 381 0.3057 0.3089 0.3097 5.73e-49 8i4p:A, 8i4r:A, 7w0j:B, 7w0j:C, 7w0j:H
18 3pfd:C 369 368 0.3005 0.3144 0.3152 2.72e-48 3pfd:A, 3pfd:B, 3pfd:D
19 1ukw:A 379 376 0.2772 0.2823 0.2846 5.25e-47 1ukw:B
20 4kto:A 377 361 0.2927 0.2997 0.3130 1.09e-46 4kto:C, 4kto:B, 4kto:D
21 8sgr:A 393 378 0.2876 0.2824 0.2937 2.79e-46 1ivh:A, 1ivh:B, 1ivh:C, 1ivh:D, 8sgr:B, 8sgr:C, 8sgr:D
22 4iv6:B 383 381 0.2979 0.3003 0.3018 2.90e-45 4iv6:A
23 8w0t:A 398 369 0.2850 0.2764 0.2981 1.24e-43 8w0t:B, 8w0t:C, 8w0t:D, 8w0u:A, 8w0u:B, 8w0u:C, 8w0u:D, 8w0z:A, 8w0z:B, 8w0z:C, 8w0z:D, 8w0z:E, 8w0z:F, 8w0z:G, 8w0z:H
24 3mpi:C 395 383 0.2927 0.2861 0.2950 1.35e-41 3mpi:A, 3mpi:B, 3mpi:D, 3mpj:B, 3mpj:A, 3mpj:D, 3mpj:E, 3mpj:F, 3mpj:G
25 3nf4:A 369 375 0.2876 0.3008 0.2960 1.76e-41 3nf4:B
26 2z1q:B 549 287 0.2461 0.1730 0.3310 2.28e-41 2z1q:A
27 2pg0:A 380 381 0.2953 0.3000 0.2992 1.04e-39 2pg0:B
28 8phe:A 551 377 0.3109 0.2178 0.3183 1.10e-39 8phe:B, 8phf:A, 8phf:B
29 3owa:C 587 385 0.2876 0.1891 0.2883 1.68e-39 3owa:A, 3owa:B, 3owa:D
30 2d29:A 386 374 0.2953 0.2953 0.3048 5.24e-39 2d29:B
31 5idu:C 405 348 0.2694 0.2568 0.2989 7.12e-39 5idu:A, 5idu:B, 5idu:D
32 6fah:D 379 378 0.2668 0.2718 0.2725 2.64e-38 6fah:C
33 6es9:A 545 386 0.3031 0.2147 0.3031 1.99e-37 6es9:B
34 5jsc:A 388 304 0.2461 0.2448 0.3125 9.67e-37 5jsc:B, 5jsc:C, 5jsc:D
35 7s7g:A 571 389 0.2850 0.1926 0.2828 1.15e-34 3b96:A, 2uxw:A
36 3mdd:A 385 389 0.2513 0.2519 0.2494 7.04e-34 3mdd:B, 3mde:A, 3mde:B, 1udy:A, 1udy:B, 1udy:C, 1udy:D
37 2a1t:C 388 383 0.2513 0.2500 0.2533 8.28e-34 2a1t:A, 2a1t:B, 2a1t:D, 1egc:A, 1egc:B, 1egc:C, 1egc:D, 1egd:A, 1egd:B, 1egd:C, 1egd:D, 1ege:A, 1ege:B, 1ege:C, 1ege:D, 4p13:A, 4p13:B, 4p13:C, 4p13:D, 8sgp:A, 8sgp:B, 8sgp:C, 8sgp:D, 1t9g:A, 1t9g:B, 1t9g:C, 1t9g:D
38 8ca1:B 589 317 0.2435 0.1596 0.2965 1.20e-33 8ca1:A
39 1rx0:A 384 378 0.2383 0.2396 0.2434 6.61e-32 1rx0:C, 1rx0:B, 1rx0:D
40 3r7k:A 378 374 0.2720 0.2778 0.2807 5.92e-31 3r7k:B, 3r7k:C, 3r7k:D
41 7p9a:A 380 376 0.2642 0.2684 0.2713 7.79e-31 7p98:A, 7p98:B, 7p9a:B, 7p9x:A, 7p9x:B, 7p9x:C, 7p9x:D
42 7xp7:B 376 365 0.2617 0.2686 0.2767 3.25e-29 7xp7:A, 7xp7:C, 7xp7:D
43 4irn:A 378 277 0.2021 0.2063 0.2816 1.73e-28 4irn:B, 4irn:C, 4irn:D, 4irn:E, 4irn:F, 4irn:G, 4irn:H
44 1r2j:A 353 264 0.2073 0.2266 0.3030 2.34e-27
45 6af6:A 383 387 0.2617 0.2637 0.2610 4.24e-27 5zw2:A, 5zw7:A, 5zw8:A
46 3oib:A 381 356 0.2435 0.2467 0.2640 2.37e-25 3oib:B, 3p4t:A, 3p4t:B
47 6cxt:B 372 225 0.1684 0.1747 0.2889 1.00e-23 6cy8:B
48 5af7:B 391 309 0.2228 0.2199 0.2783 2.62e-22 5af7:A, 5ahs:A, 5ahs:B, 5ahs:C, 5ahs:E, 5ahs:F, 5ahs:D
49 8ciw:A 555 294 0.2202 0.1532 0.2891 2.80e-22 8ciw:B
50 2wbi:B 398 291 0.2150 0.2085 0.2852 5.56e-20 2wbi:A
51 4hr3:A 407 287 0.2047 0.1941 0.2753 8.45e-20
52 6wy8:B 384 257 0.1891 0.1901 0.2840 2.88e-18 6wy8:D, 6wy9:A
53 4x28:A 386 264 0.1943 0.1943 0.2841 2.03e-17 4x28:B
54 6u1v:B 389 277 0.2098 0.2082 0.2924 2.10e-14 6u1v:A, 6u1v:C, 6u1v:D
55 5ez3:B 541 270 0.1788 0.1275 0.2556 2.38e-12 5ez3:A, 5ez3:C, 5ez3:D
56 6wy8:C 364 255 0.1813 0.1923 0.2745 2.19e-10 6wy8:A, 6wy9:B
57 4x28:D 364 257 0.1606 0.1703 0.2412 1.50e-09 4x28:C
58 8hk0:B 379 162 0.1321 0.1346 0.3148 2.64e-09 8hk0:A
59 3u33:A 540 267 0.1788 0.1278 0.2584 2.25e-08 3djl:A, 3u33:B, 3u33:C, 3u33:D, 3u33:E, 3u33:F, 3u33:G, 3u33:H, 3u33:I, 3u33:J, 3u33:K, 3u33:L
60 6sd8:X 503 302 0.2073 0.1590 0.2649 2.40e-08 6sd8:A, 6sda:A, 6sda:B
61 6kse:A 607 193 0.1477 0.0939 0.2953 1.55e-07 6kse:B
62 5ys9:A 692 198 0.1477 0.0824 0.2879 6.57e-07 5ys9:B
63 4kcf:A 407 262 0.1710 0.1622 0.2519 8.06e-07 3m9v:A
64 5y9d:A 687 197 0.1373 0.0771 0.2690 2.27e-06 5y9d:B
65 1w07:B 658 159 0.1114 0.0653 0.2704 3.81e-06 1w07:A
66 2fon:B 656 159 0.1114 0.0655 0.2704 6.66e-06 2fon:A, 2fon:C
67 6ksa:B 611 318 0.1917 0.1211 0.2327 2.37e-04 6kpt:A, 6kpt:B, 6kri:A, 6kri:B, 6ks9:A, 6ks9:B, 6ksa:A, 6ksb:A, 6ksb:B, 6lpy:A, 6lpy:B, 6lq0:A, 6lq0:B, 6lq1:A, 6lq1:B, 6lq2:A, 6lq2:B, 6lq3:A, 6lq3:B, 6lq4:A, 6lq4:B, 6lq5:A, 6lq5:B, 6lq6:A, 6lq6:B, 6lq7:A, 6lq7:B, 6lq8:A, 6lq8:B
68 5k3j:A 662 134 0.0959 0.0559 0.2761 7.20e-04 5k3j:B
69 5k3i:A 661 149 0.0959 0.0560 0.2483 0.005 5k3i:B, 5k3i:C, 5k3i:D, 5k3i:E, 5k3i:F, 5k3i:G, 5k3i:H
70 4zyj:D 392 201 0.1295 0.1276 0.2488 0.009 4zyj:A, 4zyj:B, 4zyj:C
71 3mkh:A 426 24 0.0337 0.0305 0.5417 0.011 3mkh:B, 3mkh:C, 3mkh:D
72 4xvx:B 373 250 0.1399 0.1448 0.2160 0.074 4xvx:A
73 3d9d:A 432 68 0.0492 0.0440 0.2794 0.11 2c0u:A, 2c0u:B, 2c0u:C, 2c0u:D, 2c12:A, 2c12:B, 2c12:C, 2c12:D, 2c12:E, 2c12:F, 3d9d:B, 3d9d:C, 3d9d:D, 3d9e:A, 3d9e:B, 3d9e:C, 3d9e:D, 3d9f:A, 3d9f:B, 3d9f:C, 3d9f:D, 3d9g:A, 3d9g:B, 3d9g:C, 3d9g:D, 3fcj:A, 3fcj:B, 3fcj:C, 3fcj:D, 2reh:A, 2reh:B, 2reh:C, 2reh:D, 2zaf:A, 2zaf:B, 2zaf:C, 2zaf:D
74 7q86:A 612 143 0.0959 0.0605 0.2587 0.63 7q86:B
75 1is2:A 637 143 0.0933 0.0565 0.2517 0.92 2ddh:A, 1is2:B
76 7nm8:AAA 251 42 0.0415 0.0637 0.3810 5.3
77 3k30:A 684 68 0.0544 0.0307 0.3088 7.9 3k30:B
78 6l4u:2 172 39 0.0389 0.0872 0.3846 9.9

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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