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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
TVNVGTMADLKAKGELKGNTPKGPVTVVPNGNSGQISAVNPTCTHNGCQVNWKKANGKFVCPCHGAEFAATGKVLKGPAI
RDLPTYATQVSGNNILVKA

The query sequence (length=99) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5cxm:A 99 99 1.0000 1.0000 1.0000 9.50e-69 5cxm:B, 5cxm:C, 5cxm:D
2 8hn2:A 110 91 0.3131 0.2818 0.3407 2.23e-14 8hn2:B
3 3azc:A 133 78 0.3232 0.2406 0.4103 8.62e-14
4 4h44:D 166 61 0.2626 0.1566 0.4262 2.11e-13 4ogq:D, 2zt9:D
5 2d2c:D 168 71 0.2828 0.1667 0.3944 2.67e-13 2d2c:Q, 2e74:D, 2e75:D, 2e76:D, 4h0l:D, 4h13:D, 4i7z:D, 4pv1:D, 1vf5:D, 1vf5:Q
6 7r0w:D 169 65 0.2828 0.1657 0.4308 4.36e-12 7r0w:L, 7zxy:D, 7zxy:L
7 1q90:C 126 65 0.2828 0.2222 0.4308 2.18e-11
8 6rqf:L 179 53 0.2222 0.1229 0.4151 9.91e-10 7qrm:D, 7qrm:L, 1rfs:A, 6rqf:D, 7zyv:D, 7zyv:L
9 1g8j:D 129 56 0.2222 0.1705 0.3929 8.16e-08 1g8j:B
10 8cff:B 134 56 0.2222 0.1642 0.3929 1.97e-07 8cff:D, 8cff:F, 8cff:H, 8cgs:B, 8cgs:D, 8cgs:F, 8cgs:H, 8ch9:B, 8ch9:D, 8ch9:F, 8ch9:H, 1g8k:B, 1g8k:D, 1g8k:F, 1g8k:H
11 3cwb:E 196 93 0.2525 0.1276 0.2688 3.20e-07 3cwb:R, 3h1h:E, 3h1h:R, 3h1i:R, 3h1i:E, 3h1j:R, 3h1j:E, 3h1k:E, 3h1k:R, 3h1l:E, 3h1l:R, 3l70:E, 3l70:R, 3l71:E, 3l71:R, 3l72:E, 3l72:R, 3l73:E, 3l73:R, 3l74:E, 3l74:R, 3l75:E, 3l75:R, 3tgu:E, 3tgu:R, 4u3f:E, 4u3f:R
12 8b6j:E 245 95 0.2727 0.1102 0.2842 3.89e-07 8b6j:e, 8bqs:E, 8bqs:e, 8gym:qE, 8gym:qe, 8gym:QE, 8gym:Qe, 8gzu:qE, 8gzu:qe, 8gzu:QE, 8gzu:Qe, 7tgh:3E
13 3cx5:P 185 56 0.2020 0.1081 0.3571 9.97e-07 3cx5:E, 3cxh:P, 3cxh:E, 8e7s:C, 8e7s:c, 8ec0:C, 8ec0:c, 1ezv:E, 6giq:E, 6giq:P, 6hu9:E, 6hu9:P, 2ibz:E, 1kb9:E, 1kyo:E, 1kyo:P, 1p84:E, 4pd4:E, 6t0b:E, 6t0b:P, 6t15:E, 6t15:P, 6ymx:E, 6ymx:P
14 1zrt:E 183 54 0.2121 0.1148 0.3889 1.36e-06 6xi0:E, 6xi0:R, 6xkt:E, 6xkt:R, 6xku:E, 6xku:R, 6xkv:E, 6xkv:R, 6xkw:E, 6xkw:R, 6xkx:E, 6xkx:R, 6xkz:E, 6xkz:R, 1zrt:R
15 7qhm:A 402 69 0.2424 0.0597 0.3478 1.42e-06 7q21:A, 7q21:a, 7qhm:N, 7qho:A, 7qho:N
16 2a06:E 196 57 0.1818 0.0918 0.3158 4.48e-06 2a06:R, 1bcc:E, 2bcc:E, 3bcc:E, 1be3:E, 1bgy:Q, 4d6t:R, 4d6u:R, 7dkf:Q1, 2fyu:E, 5gpn:E, 5gpn:Q, 5gup:2, 5gup:4, 6haw:E, 8iog:C, 8iog:c, 5j4z:AE, 5j4z:AP, 5j7y:AE, 5j7y:AP, 5j8k:AE, 5j8k:AP, 5klv:E, 1l0l:E, 1l0n:E, 5luf:q, 6nhg:E, 5nmi:E, 1ntk:E, 1ntm:E, 1ntz:E, 1nu1:E, 7o37:E, 7o37:P, 7o3c:E, 7o3c:P, 7o3h:E, 7o3h:P, 5okd:E, 8p65:E, 8p65:R, 1pp9:R, 1pp9:E, 1ppj:R, 1ppj:E, 8pw5:E, 8pw5:P, 8pw6:E, 8pw6:P, 8pw7:E, 8pw7:P, 6q9e:f1, 6q9e:f2, 6qbx:f1, 6qbx:f2, 6qc2:f1, 6qc2:f2, 6qc3:f1, 6qc3:f2, 6qc4:f1, 6qc4:f2, 7r3v:E, 1rie:A, 1sqb:E, 1sqp:E, 1sqq:E, 1sqv:E, 1sqx:E, 7tay:E, 7tz6:E, 7tz6:R, 8ugd:3E, 8ugd:3R, 8uge:3E, 8uge:3R, 8ugf:3E, 8ugf:3R, 8ugg:3E, 8ugg:3R, 8ugh:3E, 8ugh:3R, 8ugi:3E, 8ugi:3R, 8ugj:3E, 8ugj:3R, 8ugk:3E, 8ugk:3R, 8ugn:3E, 8ugn:3R, 8ugr:3E, 8ugr:3R, 8ugr:6E, 8ugr:6R, 5xte:C, 5xte:P, 5xth:AC, 5xth:AP, 5xti:AC, 5xti:AP, 6xvf:E, 2ybb:e, 2ybb:E, 6zfs:E, 6zft:E, 6zfu:E
17 8q1b:E 182 56 0.1919 0.1044 0.3393 4.81e-06 8q1b:P
18 5bok:A 102 68 0.2121 0.2059 0.3088 6.72e-06
19 2yiu:F 174 87 0.2727 0.1552 0.3103 1.32e-05 2yiu:C
20 8asi:E 181 90 0.2828 0.1547 0.3111 1.97e-05 8asi:A, 8asj:A, 8asj:E, 2fyn:C, 2fyn:F, 2fyn:I, 2fyn:L, 2fyn:O, 2fyn:R, 5kkz:G, 5kkz:C, 5kkz:Q, 5kkz:M, 5kli:C, 5kli:G, 5kli:M, 5kli:Q, 6nhh:C, 6nhh:G, 6nin:C, 6nin:G, 6nin:M, 6nin:Q, 6nin:U, 6nin:Y, 2nuk:A, 2num:A, 2nve:A, 2nvf:A, 2nvg:A, 2nwf:A, 2qjk:C, 2qjk:F, 2qjk:I, 2qjk:L, 2qjk:O, 2qjk:R, 2qjp:F, 2qjp:C, 2qjp:L, 2qjp:I, 2qjy:F, 2qjy:C, 2qjy:L, 2qjy:I, 2qjy:R, 2qjy:O, 7tce:C, 7tce:G, 7tce:M, 7tce:Q, 7tlj:G, 7tlj:C
21 8iuf:QE 231 75 0.2222 0.0952 0.2933 2.09e-05 8iuf:Qe, 8iuj:QE, 8iuj:Qe
22 8bpx:AD 196 60 0.2323 0.1173 0.3833 2.90e-05 8bel:D, 8bel:N, 8bpx:BD, 8bq5:AD, 8bq5:BD, 8bq6:AD, 8bq6:BD
23 8ibd:AE 109 38 0.1717 0.1560 0.4474 4.95e-05 8ibg:AE
24 7e1v:A 378 69 0.2121 0.0556 0.3043 7.52e-05 7e1v:M, 7e1w:M, 7e1w:A, 7e1x:M, 7e1x:A, 8hcr:A, 8hcr:M
25 8smr:Z 194 73 0.1919 0.0979 0.2603 1.16e-04 8smr:C, 8snh:C, 8snh:Z
26 6adq:A 382 69 0.2121 0.0550 0.3043 1.29e-04 6adq:M, 6hwh:A, 6hwh:B, 8ovc:M, 8ovc:G, 8ovd:M, 8ovd:G, 7rh5:M, 7rh5:Y, 7rh6:M, 7rh6:Y, 7rh7:Y, 7rh7:M
27 7rja:C 181 56 0.1818 0.0994 0.3214 1.29e-04 7rja:M, 7rjb:E, 7rjc:E, 7rjd:E, 7rje:C, 7rje:M
28 8ab7:P 186 48 0.1818 0.0968 0.3750 3.07e-04 8ab7:E, 8ab8:P, 8ab9:P, 8aba:P, 8abb:P, 8abe:P, 8abf:P, 8abg:P, 8abh:P, 8abi:P, 8abj:P, 8abk:P, 8abm:P, 8ac3:P, 8ac4:P, 8ac5:P
29 6kls:A 134 62 0.2222 0.1642 0.3548 3.25e-04 6kls:D, 6klv:A, 6klv:D
30 2qpz:A 103 87 0.2222 0.2136 0.2529 3.61e-04
31 4aay:B 132 65 0.2020 0.1515 0.3077 4.66e-04 4aay:D, 4aay:F, 4aay:H, 8ccq:B, 8ccq:D, 8ccq:F, 8ccq:H, 8ed4:B, 8ed4:D, 8ed4:F, 8ed4:H, 5nqd:B, 5nqd:D, 5nqd:F, 5nqd:H
32 1jm1:A 202 68 0.2525 0.1238 0.3676 5.18e-04
33 3dqy:A 106 77 0.2424 0.2264 0.3117 0.002 4emj:B
34 7yr9:A 146 44 0.1515 0.1027 0.3409 0.003 7yr9:B, 7yra:A, 7yra:B
35 1fqt:A 109 96 0.2323 0.2110 0.2396 0.008 1fqt:B
36 2e4p:A 108 72 0.2020 0.1852 0.2778 0.026 2e4p:B, 2e4q:A, 2e4q:C, 2yvj:B
37 1eg9:A 447 59 0.2121 0.0470 0.3559 0.029 4hjl:A, 4hkv:A, 2hmj:A, 2hmk:A, 2hml:A, 2hmm:A, 2hmn:A, 2hmo:A, 4hm0:A, 4hm1:A, 4hm2:A, 4hm3:A, 4hm4:A, 4hm5:A, 4hm6:A, 4hm7:A, 4hm8:A, 1ndo:A, 1ndo:C, 1ndo:E, 1o7g:A, 1o7h:A, 1o7m:A, 1o7n:A, 1o7p:A, 1o7w:A, 1uuv:A, 1uuw:A
38 6wn3:B 328 42 0.1515 0.0457 0.3571 0.045 7szh:A, 7szh:B, 7szh:C, 6wn3:A, 6wn3:C, 6wnb:A, 6wnb:B, 6wnb:C
39 2b1x:A 441 70 0.2020 0.0454 0.2857 0.046 2b1x:C, 2b1x:E, 2b24:A, 2b24:C, 2b24:E
40 3fou:A 156 34 0.1313 0.0833 0.3824 0.047 3fou:B, 1nyk:A, 1nyk:B
41 7sze:B 329 42 0.1515 0.0456 0.3571 0.054 7sze:A, 7sze:C, 7szf:A, 7szf:B, 7szf:C, 7szg:A, 7szg:B, 7szg:C, 6wnc:A, 6wnc:B, 6wnc:C, 6wnd:A, 6wnd:B, 6wnd:C
42 7vke:A 255 95 0.2323 0.0902 0.2421 0.10 8d0m:A, 3dzf:A, 3dzf:B, 3dzf:C, 3dzf:D, 3dzf:E, 3dzf:F, 3dzg:A, 3dzg:B, 3dzh:A, 3dzh:B, 3dzi:A, 3dzi:B, 3dzj:A, 3dzj:B, 3dzk:A, 3dzk:B, 6edr:A, 6edr:B, 4f45:A, 4f45:B, 4f46:A, 4f46:B, 3f6y:A, 2hct:A, 2hct:B, 2i65:A, 2i65:B, 2i66:A, 2i66:B, 2i67:A, 2i67:B, 3i9m:A, 3i9m:B, 3i9n:A, 3i9n:B, 2o3q:A, 2o3q:B, 2o3r:A, 2o3r:B, 2o3s:A, 2o3s:B, 2o3t:A, 2o3u:A, 2o3u:B, 3ofs:A, 3ofs:B, 3ofs:C, 3ofs:D, 3ofs:E, 3ofs:F, 4ogw:A, 8p8c:A, 2pgj:A, 2pgl:A, 3rok:A, 3rok:B, 3rom:A, 3rom:B, 3rop:A, 3rop:B, 3roq:A, 3roq:B, 4tmf:A, 4tmf:B, 3u4h:A, 3u4h:B, 3u4i:A, 6vua:A, 6vua:B, 4xjs:A, 4xjt:A
43 7fhr:A 437 48 0.1616 0.0366 0.3333 0.22
44 2z1a:A 507 39 0.1515 0.0296 0.3846 0.24
45 3n0q:A 402 52 0.1616 0.0398 0.3077 1.5
46 3gob:A 342 23 0.1010 0.0292 0.4348 2.0 3gb4:A, 3gb4:B, 3gb4:C, 3gke:A, 3gke:B, 3gl0:A, 3gl0:B, 3gl2:A, 3gl2:B, 3gob:B, 3gob:C, 3gte:A, 3gte:B, 3gte:C, 3gts:A, 3gts:B, 3gts:C, 6vsh:A, 6vsh:B
47 6vsh:C 320 23 0.1010 0.0312 0.4348 2.1 3gke:C, 3gl0:C, 3gl2:C
48 5ntd:G 520 64 0.1919 0.0365 0.2969 4.0 4efd:F, 5nsm:A, 5nsm:B, 5nsm:C, 5nsm:D, 5nsm:E, 5nsm:F, 5nsm:G, 5nsm:H, 5nsm:I, 5nsm:J, 5nsm:K, 5nsm:L, 5nsq:A, 5nsq:B, 5nsq:C, 5nsq:D, 5nsq:E, 5nsq:F, 5ntd:A, 5ntd:B, 5ntd:D, 5ntd:C, 5ntd:E, 5ntd:F, 5ntd:H, 5ntd:I, 5ntd:J, 5ntd:K, 5ntd:L
49 7s6e:B 400 35 0.1414 0.0350 0.4000 6.3 7s6e:A
50 3q7j:A 780 71 0.1717 0.0218 0.2394 7.8 3q7j:B, 1z1w:A, 1z5h:A, 1z5h:B
51 2jkj:F 140 26 0.1212 0.0857 0.4615 9.4 2jkj:A, 2jkj:B, 2jkj:C, 2jkj:D, 2jkj:E, 2jkl:A, 2jkl:B, 2jkl:C, 2jkl:D, 2jkl:F, 2jkl:E, 2jkn:A, 2jkn:B, 2jkn:C, 2jkn:D, 2jkn:E, 2jkn:F, 1usq:A, 1usq:B, 1usq:C, 1usq:D, 1usq:E, 1usq:F, 2w5p:A, 2w5p:B, 2w5p:C

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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