BioLiP

>protein
TTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRWDDDV
VFKNCRFVNDTLRSEFHKKFMEKYIK

The query sequence (length=106) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	9fmd:P	106	106	1.0000	1.0000	1.0000	3.34e-76	6qdv:P
2	6id0:P	118	118	0.9906	0.8898	0.8898	3.85e-70	8c6j:P, 8ch6:Q, 6ff4:R, 6ff7:R, 8i0s:P, 8i0t:P, 8i0u:P, 8i0v:P, 8i0w:P, 6icz:P, 6id1:P, 5mqf:R, 7qtt:Q, 7w59:P, 7w5a:P, 7w5b:P, 5xjc:P, 5yzg:P, 5z56:P, 5z57:P
3	8ro0:P	150	149	0.7075	0.5000	0.5034	6.70e-45	8ro1:P
4	6zym:R	87	87	0.7170	0.8736	0.8736	2.46e-34
5	8ro2:P	112	112	0.6792	0.6429	0.6429	2.13e-28
6	3jb9:h	90	88	0.4151	0.4889	0.5000	9.72e-22
7	7b9v:P	74	107	0.2453	0.3514	0.2430	0.027	6bk8:H, 7dco:S, 6exn:P, 5gm6:S, 5gmk:S, 6j6g:S, 6j6h:S, 6j6n:S, 6j6q:S, 5lj3:P, 5lj5:P, 5mps:P, 5mq0:P, 5wsg:S, 5y88:P, 5ylz:P
8	8dqx:C	330	53	0.1509	0.0485	0.3019	2.0	8dqw:C, 8dqz:C, 8dr0:C, 8dr1:C, 8dr3:C, 8dr4:C, 8dr5:C, 8dr6:C, 8dr7:C, 8fs3:C, 8fs4:C, 8fs5:C, 8fs6:C, 8fs7:C, 8fs8:C, 7sgz:C, 7sh2:C, 7st9:C, 7stb:C, 7ste:C, 1sxj:C, 7tfh:C, 7tfi:C, 7tfj:C, 7tfk:C, 7tfl:C, 7thj:C, 7thv:C, 8thb:C, 8thc:C, 8thd:C, 7ti8:C, 7tib:C, 7tic:C, 7tid:C, 7tku:C, 8tw7:3, 8tw8:3, 8twa:3, 8twb:3, 7u19:C, 7u1a:C, 7u1p:C
9	7oik:A	4426	54	0.1698	0.0041	0.3333	2.9	7oim:A, 6tax:A, 6tay:A
10	2ja1:A	193	57	0.1415	0.0777	0.2632	3.5	2j9r:A
11	6ltb:A	928	28	0.1132	0.0129	0.4286	9.2	6ltc:A, 6ltd:A, 6ltd:B

[Back]