BioLiP

>protein
TRLRIAIQKSGRLSKESIELLSECGVKMHSLIAFSTNLPIDILRVRDDDIPGLIFDGVVDLGIIGENVLEENELERQSLG
ENPSYKLLKKLDFGYCRLSLALPQEFQNLKDFEGLRIATSYPQLLKRFMKENGINYKNCTLTGSVEVAPRANLADAICDL
VSSGATLQANNLKEVKVIYESRACLIQKENALSKEKQALVDKIMLRVAGVMQARESKYIMLHAPKEKLDKIQALLPGVER
PTILPLAHDEKNVALHMVSKENLFWETMEALKEEGASSILVLPIEKMLK

The query sequence (length=289) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	4yb6:A	296	295	1.0000	0.9764	0.9797	0.0	5ub9:A, 5ub9:B, 5ubg:A, 5ubg:B, 5ubh:A, 5ubh:B, 5ubi:A, 5ubi:B, 4yb5:A, 4yb5:E, 4yb5:B, 4yb5:C, 4yb5:F, 4yb5:D, 4yb6:E, 4yb6:B, 4yb6:C, 4yb6:F, 4yb6:D, 4yb7:B, 4yb7:C, 4yb7:D, 4yb7:E, 4yb7:I, 4yb7:K, 4yb7:A, 4yb7:F, 4yb7:G, 4yb7:H, 4yb7:J, 4yb7:L
2	1h3d:A	288	295	0.6644	0.6667	0.6508	3.36e-136	1q1k:A
3	7dah:C	288	294	0.6228	0.6250	0.6122	2.80e-124	7dah:F
4	2vd3:A	289	295	0.3426	0.3426	0.3356	5.07e-47	2vd3:B
5	5lht:A	284	289	0.3010	0.3063	0.3010	4.78e-29	5lhu:A, 1nh8:A, 5u99:A
6	6czm:E	342	320	0.3253	0.2749	0.2938	5.58e-29	6czm:A, 6czm:C, 6czm:D
7	6czm:F	315	311	0.3010	0.2762	0.2797	1.18e-20	6czm:B
8	1z7n:F	205	194	0.2076	0.2927	0.3093	1.52e-19	1z7m:G, 1z7m:E, 1z7m:H, 1z7n:E, 1z7n:G, 1z7n:H
9	6fca:A	209	213	0.2318	0.3206	0.3146	1.69e-16	6fct:A, 6fcw:A, 6fcy:A, 6fd9:A, 6ftt:E, 6ftt:H, 6ftt:G, 6ftt:F, 6fu2:C, 6fu2:D, 6fu7:C, 6fu7:D, 6fua:C, 6fua:D, 6r02:E, 6r02:F, 6r02:G, 6r02:H, 7z6r:C, 7z6r:D, 7z8u:A
10	1usy:G	203	201	0.2042	0.2906	0.2935	6.38e-15	1usy:F, 1usy:E, 1usy:H
11	6wzg:R	379	58	0.0657	0.0501	0.3276	0.046	7d3s:R, 6wi9:R
12	5zku:F	443	45	0.0484	0.0316	0.3111	0.93	5zku:A, 5zku:B, 5zku:C, 5zku:D, 5zku:E, 5zkw:A, 5zkw:B, 5zkw:C, 5zkw:E, 5zkw:F, 5zl4:A, 5zla:A, 5zla:D, 5zla:B, 5zla:C, 5zla:F, 5zla:E
13	3nhi:A	295	86	0.1003	0.0983	0.3372	1.8	3nht:A
14	6qxp:E	344	85	0.0796	0.0669	0.2706	2.0
15	3cg3:A	315	69	0.0657	0.0603	0.2754	2.5
16	6hxi:B	616	41	0.0519	0.0244	0.3659	3.0	6hxi:D, 6znw:B
17	4ipn:E	463	33	0.0450	0.0281	0.3939	3.0	4ipn:B
18	7r5v:N	297	61	0.0519	0.0505	0.2459	3.2	7yyh:N
19	5c56:A	528	118	0.0900	0.0492	0.2203	3.8	5c6d:A, 5c6d:B, 5gg4:A, 5gg4:B, 5gg4:C, 5gg4:D, 6p5l:A, 4wph:B, 4wph:A, 4wpi:B, 4wpi:A, 7xpy:A, 4z96:A, 4z97:A
20	2xma:E	141	44	0.0519	0.1064	0.3409	4.8	2xm3:A, 2xm3:B, 2xm3:C, 2xm3:D, 2xm3:F, 2xm3:E, 2xma:A, 2xma:B, 2xma:F, 2xo6:A, 2xo6:D, 2xqc:A, 2xqc:D
21	7fcm:B	269	40	0.0484	0.0520	0.3500	6.6	7f44:A, 7fcm:A
22	8qqk:B	263	35	0.0415	0.0456	0.3429	6.7	1cyx:A, 1fft:B, 8go3:B, 7n9z:G, 6wti:B, 7xmc:B, 7xmd:B
23	6emu:A	170	56	0.0727	0.1235	0.3750	7.2	6emu:B, 6emu:C, 6emv:A, 6emv:B, 6emv:C
24	7fc8:A	243	40	0.0484	0.0576	0.3500	7.2
25	4b98:A	441	20	0.0311	0.0204	0.4500	9.6	4b98:B, 4b98:C, 4b98:D, 4b9b:A, 4b9b:B, 4b9b:C, 4b9b:D, 4b9b:E, 4b9b:F, 4b9b:G, 4b9b:H, 4bq0:A, 4bq0:B, 4bq0:C, 4bq0:D

[Back]