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BioLiP
>protein
TRLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLL
ELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETFAKAQ
AG

The query sequence (length=162) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1u7p:A 164 162 1.0000 0.9878 1.0000 7.82e-121 1u7p:B, 1u7p:C, 1u7p:D
2 8pno:A 202 110 0.1605 0.1287 0.2364 0.021 2b0c:A, 8pne:A, 8pno:B
3 3duw:A 220 83 0.1358 0.1000 0.2651 1.2 3duw:B
4 8gs8:A 614 108 0.1790 0.0472 0.2685 1.9 3abv:A, 3ae1:A, 3ae2:A, 3ae3:A, 3ae4:A, 3ae5:A, 3ae6:A, 3ae7:A, 3ae8:A, 3ae9:A, 3aea:A, 3aeb:A, 3aec:A, 3aed:A, 3aee:A, 3aef:A, 3aeg:A, 8dyd:A, 8dye:A, 2fbw:A, 2fbw:N, 2h88:A, 2h88:N, 2h89:A, 6myo:A, 6myp:A, 6myq:A, 6myr:A, 6mys:A, 6myt:A, 6myu:A, 3sfd:A, 3sfe:A, 6vax:A, 6vax:C, 2wqy:A, 2wqy:N, 1yq3:A, 1yq4:A, 4ytp:A, 4yxd:A, 1zoy:A, 1zp0:A
5 7tm7:A 802 78 0.1358 0.0274 0.2821 2.0 7tm7:B
6 3swg:A 417 38 0.0741 0.0288 0.3158 2.2 2yvw:A
7 6xn1:B 333 46 0.0926 0.0450 0.3261 3.2 6xn1:A, 6xn2:B, 6xn2:A
8 4gox:A 275 51 0.1049 0.0618 0.3333 3.4
9 6iso:I 248 26 0.0741 0.0484 0.4615 4.4
10 6w04:A 223 116 0.1728 0.1256 0.2414 9.8

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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