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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
TQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGDLEILLQKWENGECAQKKIIAEKTKIPAVFK
IDALNENKVLVLDTDYKKYLLFCMENSAEPEQSLACQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCHI

The query sequence (length=159) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1bso:A 162 159 0.9874 0.9691 0.9874 5.98e-115 1b0o:A, 7bf7:AAA, 7bf8:BBB, 7bf9:AAA, 4dq3:A, 4dq4:A, 7er3:A, 7er3:B, 7er3:C, 7er3:D, 6ge7:A, 6gf9:A, 6gfs:A, 6ghh:A, 2gj5:A, 4gny:A, 1gx8:A, 1gx9:A, 1gxa:A, 4ib6:A, 4ib7:A, 4ib8:A, 4ib9:A, 4iba:A, 4kii:A, 7kot:A, 7kp5:AA1, 7kp5:BA1, 5lke:A, 5lkf:A, 4lzu:A, 4lzv:A, 6nkq:B, 3nq9:A, 5nuj:A, 5nuk:A, 5num:A, 5nun:A, 4omw:C, 4omw:D, 4omx:A, 7q19:AAA, 7q2n:AAA, 7q2n:BBB, 7q2o:AAA, 7q2o:BBB, 7q2p:AAA, 7q2p:BBB, 6t42:AAA, 6t44:AAA, 6t44:BBB, 3uew:A, 7wql:A, 7wql:B, 4y0p:A, 4y0q:A, 4y0r:A, 4y0s:A, 5y5c:A, 5y5c:B, 7z9z:AAA, 7za0:AAA, 7zcd:AAA
2 8aej:A 160 141 0.2201 0.2188 0.2482 1.10e-12
3 2a2g:A 158 139 0.2264 0.2278 0.2590 1.37e-11 2a2g:B, 2a2g:C, 2a2g:D
4 1gm6:A 158 127 0.2075 0.2089 0.2598 3.96e-10
5 3kff:A 152 129 0.1950 0.2039 0.2403 4.27e-10 3kfg:A, 3kfh:A, 3kfi:A
6 2ra6:C 143 120 0.1761 0.1958 0.2333 5.81e-09 2r74:A, 2r74:B, 2ra6:A, 2ra6:B, 2ra6:D
7 8aei:A 152 135 0.1887 0.1974 0.2222 1.54e-08 8aei:B
8 8epv:A 136 147 0.2579 0.3015 0.2789 3.19e-06
9 2dm5:A 157 133 0.1572 0.1592 0.1880 5.01e-06 1i05:A, 1jv4:A, 2nnd:A, 1qy1:A, 1qy2:A, 1yp6:A, 1znd:A, 1zne:A, 1zng:A, 1znh:A, 1znl:A
10 3eyc:B 140 145 0.2264 0.2571 0.2483 9.08e-05 3eyc:C, 1xki:A
11 1dzm:A 149 129 0.1509 0.1611 0.1860 0.004 1dzj:A, 1dzj:B, 1dzk:A, 1dzm:B, 1dzp:A, 1dzp:B, 1e00:A, 1e00:B, 1e02:A, 1e02:B, 1e06:A, 1e06:B, 1hqp:A
12 2kt4:B 157 128 0.1887 0.1911 0.2344 0.008 2lbv:A
13 4ge1:A 195 100 0.1950 0.1590 0.3100 0.024 4ge1:B, 4ge1:C, 4ge1:D
14 8wb2:A 179 145 0.2013 0.1788 0.2207 0.032
15 3sao:A 150 138 0.2201 0.2333 0.2536 0.066 3sao:B
16 8aeh:AA1 118 128 0.2138 0.2881 0.2656 0.40
17 1qab:E 180 107 0.1950 0.1722 0.2897 0.93 1qab:F
18 1iiu:A 174 107 0.1887 0.1724 0.2804 0.96
19 8dty:A 4004 60 0.1006 0.0040 0.2667 1.3 8dty:B, 8dty:C, 8dty:D
20 6wou:A 3921 60 0.1006 0.0041 0.2667 1.4 6wou:B, 6wou:C, 6wou:D, 6wov:A, 6wov:B, 6wov:C, 6wov:D
21 8dtz:A 4061 60 0.1006 0.0039 0.2667 1.4 8dtz:B, 8dtz:C, 8dtz:D
22 1fem:A 176 107 0.1950 0.1761 0.2897 1.4 1aqb:A, 1brp:A, 3bsz:E, 3bsz:F, 1erb:A, 1fel:A, 1fen:A, 3fmz:A, 3fmz:B, 1hbp:A, 1kt3:A, 1kt4:A, 1kt5:A, 1kt6:A, 1kt7:A, 5nu7:A, 5nua:A, 5nub:A, 4o9s:A, 4o9s:B, 4psq:B, 4psq:A, 6qba:A, 1rbp:A, 1rlb:E, 1rlb:F, 2wr6:A
23 7vml:A 4044 60 0.1006 0.0040 0.2667 1.4 7aih:UA, 7am2:UA, 7ane:UA, 5dat:l1, 5gak:r, 6hd7:r, 6j3z:19, 6j40:19, 6j40:39, 5mc6:AZ, 6n8k:s, 6n8l:s, 6n8m:S, 6n8n:S, 6n8o:S, 7nrc:Lt, 6o1o:F, 6o1o:G, 6o1o:H, 6qik:p, 6qtz:p, 6ri5:p, 7rr5:L1, 6rzz:p, 6s05:p, 5t62:S, 5t6r:S, 6tnu:BT, 7vml:B, 7vml:C, 7vml:D, 7vmm:A, 7vmm:B, 7vmm:C, 7vmm:D, 7vmn:A, 7vmn:B, 7vmn:C, 7vmn:D, 7vmo:A, 7vmo:B, 7vmo:C, 7vmo:D, 7vmp:A, 7vmp:B, 7vmp:C, 7vmp:D, 7vmq:A, 7vmq:B, 7vmq:C, 7vmq:D, 7vmr:A, 7vmr:B, 7vmr:C, 7vmr:D, 7vms:A, 7vms:B, 7vms:C, 7vms:D
24 8uxh:A 4004 60 0.1006 0.0040 0.2667 1.5 8uxh:B, 8uxh:C, 8uxh:D, 8uxi:A, 8uxi:B, 8uxi:C, 8uxi:D
25 8uxl:A 4232 60 0.1006 0.0038 0.2667 1.5 7u9q:A, 7u9q:D, 7u9q:B, 7u9q:C, 7u9r:A, 7u9r:D, 7u9r:B, 7u9r:C, 7u9t:A, 7u9t:D, 7u9t:B, 7u9t:C, 7u9x:A, 7u9x:B, 7u9x:C, 7u9x:D, 7u9z:A, 7u9z:B, 7u9z:C, 7u9z:D, 7ua1:A, 7ua1:B, 7ua1:C, 7ua1:D, 7ua5:A, 7ua5:B, 7ua5:C, 7ua5:D, 7ua9:A, 7ua9:B, 7ua9:C, 7ua9:D, 8uq2:A, 8uq2:B, 8uq2:C, 8uq2:D, 8uq3:A, 8uq3:B, 8uq3:C, 8uq3:D, 8uq4:A, 8uq4:B, 8uq4:C, 8uq4:D, 8uq5:A, 8uq5:B, 8uq5:C, 8uq5:D, 8uxc:A, 8uxc:B, 8uxc:C, 8uxc:D, 8uxe:A, 8uxe:B, 8uxe:C, 8uxe:D, 8uxf:A, 8uxf:B, 8uxf:C, 8uxf:D, 8uxg:A, 8uxg:B, 8uxg:C, 8uxg:D, 8uxl:B, 8uxl:C, 8uxl:D, 8uxm:A, 8uxm:B, 8uxm:C, 8uxm:D
26 7ua3:A 4443 60 0.1006 0.0036 0.2667 1.5 7ua3:B, 7ua3:C, 7ua3:D, 7ua4:A, 7ua4:B, 7ua4:C, 7ua4:D
27 4qaf:A 109 100 0.1635 0.2385 0.2600 2.1
28 8dvv:A 3886 58 0.1006 0.0041 0.2759 3.2 8dvv:B, 8dvv:C, 8dvv:D
29 7t65:A 4252 67 0.1132 0.0042 0.2687 3.2 7t64:A, 7t64:B, 7t64:C, 7t64:D, 7t65:B, 7t65:C, 7t65:D
30 2yzq:A 224 61 0.0943 0.0670 0.2459 4.2
31 3hl3:A 246 40 0.0881 0.0569 0.3500 5.3 4ecm:A
32 6gr0:A 173 133 0.1572 0.1445 0.1880 6.3 6gr0:B, 6gr0:C
33 7tdg:A 4134 62 0.1069 0.0041 0.2742 6.3 7tdg:C, 7tdg:D, 7tdg:B, 7tdi:B, 7tdi:C, 7tdi:D, 7tdi:A, 7tdj:A, 7tdj:B, 7tdj:C, 7tdj:D, 7tdk:A, 7tdk:B, 7tdk:C, 7tdk:D
34 5nkn:A 172 133 0.1572 0.1453 0.1880 6.3 6z6z:A
35 4pz3:B 151 53 0.0943 0.0993 0.2830 6.9
36 6npb:B 378 34 0.0755 0.0317 0.3529 7.4 6npb:A, 6npc:A, 6npc:B, 6npd:A, 6npd:B
37 6knh:C 384 85 0.1258 0.0521 0.2353 7.7 6knh:A, 6knh:B, 6kni:A, 6kni:B, 6kni:C, 6knk:A, 6knk:B, 6knk:C
38 8duj:G 3933 60 0.1006 0.0041 0.2667 7.8
39 8xaw:B 567 44 0.0943 0.0265 0.3409 8.5 8xaw:C, 8xaw:D, 8xaw:E, 8xaw:A, 8xaw:F, 8xax:A, 8xax:B, 8xax:C, 8xax:D, 8xax:E, 8xax:F, 8xay:B, 8xay:C, 8xay:D, 8xay:E, 8xay:A, 8xay:F
40 7k0s:A 4110 60 0.1069 0.0041 0.2833 9.0 7k0s:B, 7k0s:D, 7k0s:C, 7k0t:A, 7k0t:B, 7k0t:D, 7k0t:C
41 5tb3:B 4196 60 0.1069 0.0041 0.2833 9.0 7aih:UB, 7am2:U5, 7am2:U2, 7ane:UB, 7aoi:UK, 6bbm:W, 6c5l:BJ, 6c5l:DJ, 9f1c:BK, 7f4v:aJ, 7f4v:bJ, 7f4v:cJ, 6fg3:A, 6fg3:B, 6fg3:C, 6fg3:D, 1fka:Q, 1fka:T, 5gan:x, 6h8k:Y, 6h8k:j, 6hiv:AB, 6hix:AB, 5j4z:H, 5j4z:E, 5j4z:F, 5j4z:I, 5j7y:H, 5j7y:E, 5j7y:F, 5j7y:I, 5j8k:H, 5j8k:E, 5j8k:F, 5j8k:I, 6jlu:N, 6jlu:n, 7jmf:B, 7jmf:E, 7jmf:G, 7jmf:I, 7jmg:B, 7jmg:E, 7jmg:I, 7jmg:G, 7jmh:B, 7jmh:E, 7jmh:G, 7jmh:I, 7jmi:B, 7jmi:E, 7jmi:G, 7jmi:I, 7jmj:B, 7jmj:E, 7jmj:G, 7jmj:I, 5jpq:n, 5jpq:C, 7l8w:H, 5lc5:P, 5ldw:P, 5ldx:P, 7lh5:BJ, 7lh5:DJ, 5lj3:x, 5lj5:x, 5luf:E, 5luf:F, 5luf:G, 5luf:I, 5nvs:I, 5nvs:K, 5nvs:J, 5nvs:L, 5nvu:K, 5nvu:M, 5nvu:L, 5nvu:N, 2o01:K, 6o1o:B, 6o1o:C, 6o1o:D, 6o1o:E, 6o1o:I, 6o1o:J, 6o1o:K, 5o31:P, 5ot7:l, 7pkq:D, 7pkt:X, 7pkt:C, 7pub:U7, 7pub:UE, 6pv6:B, 6pv6:E, 6pv6:I, 6pv6:G, 1pyh:C, 1pyh:E, 1pyh:K, 1pyh:S, 1pyh:Y, 6q95:H, 7qwq:s, 5t15:B, 5t15:E, 5t15:I, 5t15:G, 5t9m:B, 5t9m:E, 5t9m:I, 5t9m:G, 5t9n:B, 5t9n:E, 5t9n:I, 5t9n:G, 5t9r:B, 5t9r:E, 5t9r:I, 5t9r:G, 5t9s:B, 5t9s:E, 5t9s:I, 5t9s:G, 5t9v:B, 5t9v:G, 5t9v:I, 5t9v:E, 5ta3:B, 5ta3:G, 5ta3:I, 5ta3:E, 5tal:B, 5tal:G, 5tal:I, 5tal:E, 5tam:B, 5tam:E, 5tam:I, 5tam:G, 5tan:B, 5tan:E, 5tan:I, 5tan:G, 5tap:B, 5tap:E, 5tap:I, 5tap:G, 5taq:B, 5taq:E, 5taq:I, 5taq:G, 5tas:B, 5tas:I, 5tas:E, 5tas:G, 5tat:B, 5tat:I, 5tat:E, 5tat:G, 5tau:B, 5tau:I, 5tau:E, 5tau:G, 5tav:B, 5tav:E, 5tav:I, 5tav:G, 5taw:B, 5taw:G, 5taw:I, 5taw:E, 5tax:B, 5tax:I, 5tax:G, 5tax:E, 5tay:B, 5tay:G, 5tay:I, 5tay:E, 5taz:B, 5taz:I, 5taz:G, 5taz:E, 5tb0:B, 5tb0:G, 5tb0:E, 5tb0:I, 5tb1:B, 5tb1:I, 5tb1:E, 5tb1:G, 5tb2:B, 5tb2:I, 5tb2:E, 5tb2:G, 5tb3:E, 5tb3:I, 5tb3:G, 5tb4:B, 5tb4:E, 5tb4:I, 5tb4:G, 7tdh:A, 7tdh:B, 7tdh:C, 7tdh:D, 8tug:M, 8tvp:M, 8tvq:M, 8tvs:M, 8tye:L, 5tzs:y, 5tzs:n, 5tzs:o, 4uq8:E, 4uq8:F, 4uq8:G, 4uq8:I, 4v3p:SW, 4v3p:LL, 4v5e:BJ, 4v5e:DJ, 4v5f:BJ, 4v5f:BL, 4v5f:Bl, 4v5f:DJ, 4v5f:DL, 4v5f:Dl, 4v5g:BJ, 4v5g:DJ, 4v5j:BJ, 4v5j:DJ, 4v5k:BJ, 4v5k:DJ, 4v5l:BJ, 4v5p:BJ, 4v5p:DJ, 4v5q:BJ, 4v5q:DJ, 4v5r:BJ, 4v5r:DJ, 4v5s:BJ, 4v5s:DJ, 4v6i:AW, 4v6i:Ab, 4v6i:BL, 4v7r:Ab, 4v7r:Ac, 4v7r:Ad, 4v7r:Ah, 4v7r:Bh, 4v7r:Cb, 4v7r:Cc, 4v7r:Cd, 4v7r:Ch, 4v7r:Dh, 4v8n:BJ, 4v8n:DJ, 4v8o:BJ, 4v8q:AJ, 4v8u:BJ, 4v8u:DJ, 4v8x:BJ, 4v8x:DJ, 4v90:BJ, 4v9h:BJ, 4v9h:BL, 4v9i:BJ, 4v9i:DJ, 4v9j:BJ, 4v9j:DJ, 4v9k:BJ, 4v9k:DJ, 4v9l:BJ, 4v9l:DJ, 4v9m:BJ, 4v9m:DJ, 7vd5:5, 6w1s:G, 4w29:BJ, 4w29:DJ, 8wb4:g, 8wb4:G, 5wlc:SX, 6wmt:K, 4wt8:CJ, 4wt8:DJ, 5wyj:AA, 5wyj:UA, 5wyj:UB, 5wyk:AA, 5wyk:UA, 5wyk:UB, 4wz7:Z, 4wz7:AN, 8xkl:G, 6xyw:BI, 6xyw:BJ, 6xyw:BK, 7y3f:K, 6z1p:AD, 6z1p:BC, 5zep:0, 6zm5:v
42 2qvr:A 332 35 0.0692 0.0331 0.3143 9.1 2owz:A, 2ox3:A
43 6foo:A 4168 60 0.1069 0.0041 0.2833 9.3 5dat:m2, 5dc3:m2, 5dgv:m2, 5fci:m2, 5fcj:m2, 6foo:B, 6foo:C, 6foo:D, 5i4l:m2, 5it7:KK, 6j3z:20, 6j3z:21, 5j4z:B, 6j40:20, 6j40:40, 6j40:21, 6j40:41, 8j5k:4, 8j5k:9, 5j7y:B, 5j8k:B, 7lh5:BK, 7lh5:DK, 5luf:B, 5lyb:m2, 5mrc:dd, 5mre:dd, 5mrf:dd, 5obm:m2, 5on6:m2, 5ot7:m, 7pkq:V, 7pkt:Y, 6q95:I, 5tga:m2, 5tzs:Z, 5tzs:m, 4u3m:m2, 4u3n:m2, 4u3u:m2, 4u4n:m2, 4u4o:m2, 4u4q:m2, 4u4r:m2, 4u4u:m2, 4u4y:m2, 4u4z:m2, 4u50:m2, 4u51:m2, 4u52:m2, 4u53:m2, 4u55:m2, 4u56:m2, 4u6f:m2, 4uq8:B, 6uz7:AK, 4v3p:SG, 4v5g:BK, 4v5g:DK, 4v5l:BK, 4v5p:BK, 4v5p:DK, 4v5q:BK, 4v5q:DK, 4v5r:BK, 4v5r:DK, 4v5s:BK, 4v5s:DK, 4v6i:AG, 4v88:DK, 4v8o:BK, 4v8q:AK, 4v8t:K, 4v8y:BK, 4v8z:BK, 4v90:BK, 8w4p:4, 6woo:K, 7y1a:A, 7y5e:A8, 7y5e:AC, 7y7a:AN, 7y7a:AY, 5z3g:d
44 8vk4:D 4379 60 0.1069 0.0039 0.2833 9.3 8vjj:A, 8vjj:D, 8vjj:B, 8vjj:C, 8vjk:A, 8vjk:B, 8vjk:C, 8vjk:D, 8vk3:A, 8vk3:D, 8vk3:B, 8vk3:C, 8vk4:A, 8vk4:B, 8vk4:C
45 7tzc:A 4404 60 0.1069 0.0039 0.2833 9.3 3rqr:A, 8sen:A, 8sen:B, 8sen:C, 8sen:D, 8seo:A, 8seo:B, 8seo:C, 8seo:D, 8sep:A, 8sep:B, 8sep:C, 8sep:D, 8seq:A, 8seq:B, 8seq:C, 8seq:D, 8ser:A, 8ser:B, 8ser:C, 8ser:D, 8ses:A, 8ses:B, 8ses:C, 8ses:D, 8set:A, 8set:B, 8set:C, 8set:D, 7tzc:B, 7tzc:G, 7tzc:I
46 6wot:A 4197 60 0.1069 0.0041 0.2833 9.6 6wot:B, 6wot:C, 6wot:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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