BioLiP

>protein
TPPNAPVVTYSDIVNDLIIMQGTAEAKSQLIITDSEGNTYTLTVPDNGKWSMAIPYPSEGKFTITSVDAIGNRSDDVPLD
IMKEVPVISLSPDSDSGTVGDNITRDKQPTFIIGNLESDVVVVQVDINGTVYNAEKNADGVWFFTPGTPLADGSYTISVI
ASDAAGNQKNSLPITVTIDSTLTVPEIALAAGEVTNHTQPKFTLQHIDADVTGVTVNVTHNGVTDIYQATQGADGWTFTP
PAAWNDGNYTLSVTVVDRAGNSQQSASLAVTVD

The query sequence (length=273) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	2yn3:C	284	278	0.9963	0.9577	0.9784	0.0	2yn3:A, 2yn3:B, 2yn3:D, 2yn5:A, 2yn5:B
2	4p99:A	415	232	0.2308	0.1518	0.2716	0.006	4kdv:A, 4kdw:A, 4p99:B, 4p99:C, 4p99:D
3	4p99:A	415	191	0.2015	0.1325	0.2880	0.008	4kdv:A, 4kdw:A, 4p99:B, 4p99:C, 4p99:D
4	4p99:A	415	82	0.0916	0.0602	0.3049	1.3	4kdv:A, 4kdw:A, 4p99:B, 4p99:C, 4p99:D
5	5k8g:A	511	54	0.0769	0.0411	0.3889	0.18	6x5v:A, 6x5w:A, 6x6m:A, 6x6q:A
6	6bt9:B	626	30	0.0549	0.0240	0.5000	0.53	6bt9:A
7	7dm0:A	167	76	0.0842	0.1377	0.3026	0.76	7dm0:B
8	7uww:A	632	51	0.0696	0.0301	0.3725	0.95	7uwu:A, 7uwu:B, 7uwv:A, 7uww:B
9	3nk3:A	284	88	0.0842	0.0810	0.2614	1.5	3nk3:B, 3nk4:A, 3nk4:B
10	5irb:B	314	82	0.0916	0.0796	0.3049	2.9	5irb:A
11	8cmk:A	913	52	0.0513	0.0153	0.2692	3.3	8cmk:B, 6gx9:A, 6gx9:B
12	8cmk:A	913	28	0.0513	0.0153	0.5000	3.6	8cmk:B, 6gx9:A, 6gx9:B
13	7biz:A	478	139	0.1319	0.0753	0.2590	3.8	7biz:B
14	6vjb:A	1346	67	0.0769	0.0156	0.3134	4.6
15	7edd:A	1394	67	0.0769	0.0151	0.3134	4.6	5xyr:A
16	5xya:A	1358	67	0.0769	0.0155	0.3134	4.8	5xxz:A
17	5xxz:B	1310	67	0.0769	0.0160	0.3134	5.0
18	7mqa:LO	819	80	0.0769	0.0256	0.2625	6.6
19	3ckg:A	236	154	0.1612	0.1864	0.2857	8.9
20	6xi3:AAA	388	163	0.1575	0.1108	0.2638	9.9

[Back]