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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
TPCTAATAAVRAGIDRDTAYGAVTPPIVLSSNFSFDGFGNKRQYDYTRSGNPTRDLLGEALAELEGGAGGVITSTGMGAI
NLVLNAVLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTVPRSLADALAQSPKLVLIETPSNPLLRITDLRFVI
EAAKKVGALTVVDNTFLSPALQKPLDFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFL
TLRGLRTLDARLRVHQENADAIAELLDGHAMVNQVYFPGLATHPGHALAARQQKGFGAMMSFELEGGEAAVRAFVDGLRY
FTLAESLGGVESLIAHPASMTHAAMTAEARAAAGISDGLLRLSIGIESAEDLLIDLRAGLSRAEATL

The query sequence (length=387) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6ld8:A 388 387 1.0000 0.9974 1.0000 0.0 6ld8:D, 6ld8:B, 6ld8:C, 6ld9:A, 6ld9:B, 6ld9:C, 6ld9:D, 6lgo:A, 6lgo:B, 6lgo:C, 6lgo:D
2 1cs1:D 384 378 0.5762 0.5807 0.5899 2.02e-161
3 4iyo:D 384 382 0.4625 0.4661 0.4686 1.18e-109 4ixs:B, 4ixz:A, 4iy7:A, 4iy7:B, 4iy7:C, 4iy7:D, 4iyo:A, 4iyo:B, 4iyo:C
4 4l0o:H 373 376 0.4444 0.4611 0.4574 1.83e-109 4l0o:A, 4l0o:C, 4l0o:E, 4l0o:G, 4l0o:M, 4l0o:O
5 7ba4:A 377 381 0.4522 0.4642 0.4593 5.96e-107 7ba4:B, 7ba4:C, 7ba4:D
6 3qhx:A 377 382 0.4755 0.4881 0.4817 3.17e-106 3qhx:B
7 5x5h:A 385 382 0.4393 0.4416 0.4450 3.80e-106
8 6k1l:A 382 375 0.4470 0.4529 0.4613 1.91e-103 6k1l:B, 6k1l:C, 6k1l:D, 6k1m:A, 6k1m:B, 6k1m:C, 6k1m:D, 6k1n:A, 6k1n:B, 6k1n:C, 6k1n:D
9 7d7o:B 377 361 0.4005 0.4111 0.4294 9.55e-103 7d7o:A
10 8jui:A 380 372 0.4264 0.4342 0.4435 2.37e-102
11 1e5e:A 394 388 0.4238 0.4162 0.4227 1.72e-99 1e5e:B, 1e5f:A, 1e5f:B
12 6cja:A 381 376 0.4212 0.4278 0.4335 2.36e-99 6cja:B, 6cja:C, 6cja:D
13 6egr:A 396 386 0.4238 0.4141 0.4249 6.46e-97 5d5s:A, 5e4z:A, 4hf8:A, 3jw9:A, 3jwa:A, 3jwb:A, 5k30:A, 5m3z:A, 3mkj:A, 4oma:A, 6s0c:A
14 7mcb:H 380 375 0.3979 0.4053 0.4107 4.76e-96 7mcl:H, 7mcn:H, 7mcp:A, 7mcp:H, 7mcq:A, 7mcq:H, 7mct:H, 7mcu:H, 7mcy:H, 7md0:H, 7md6:H, 7md8:H, 7mda:H, 7mdb:H
15 6ldo:A 381 379 0.3979 0.4042 0.4063 8.19e-95 6ldo:B, 6ldo:C, 6ldo:D, 6ldo:E, 6ldo:F, 6le4:A, 6le4:B, 6le4:C, 6le4:D, 6le4:E, 6le4:F
16 5dx5:A 399 388 0.4109 0.3985 0.4098 1.69e-94 5dx5:B
17 1n8p:A 393 388 0.4367 0.4300 0.4356 7.97e-91 1n8p:B, 1n8p:C, 1n8p:D
18 8j6n:A 390 380 0.3928 0.3897 0.4000 2.10e-90 8j6n:D, 8j6n:B, 8j6n:C, 8j6n:E, 8j6n:H, 8j6n:J, 8j6n:K, 8j6n:F, 8j6n:G, 8j6n:I, 8j6n:L
19 3cog:D 392 362 0.3798 0.3750 0.4061 1.22e-87 3cog:A, 3cog:B, 3cog:C, 5eig:C, 5eig:D, 5eig:E, 5eig:F, 5eig:G, 6nba:A, 6nba:B, 6nba:C, 6nba:D, 2nmp:A, 2nmp:B, 2nmp:C, 2nmp:D, 5tsu:A, 5tsu:C, 5tsu:D, 5tsu:E, 5tsu:F, 5tsu:G, 5tsu:H
20 1ibj:A 380 357 0.3618 0.3684 0.3922 2.18e-86 1ibj:C
21 1pg8:A 398 385 0.3876 0.3769 0.3896 2.47e-86 7f1u:A, 7f1u:B, 7f1u:C, 7f1u:D, 7f1v:A, 7f1v:B, 7f1v:C, 7f1v:D, 1pg8:C, 1pg8:B, 1pg8:D, 3vk3:A, 3vk3:B, 3vk3:C, 3vk3:D, 5x2w:A, 5x2w:B, 5x2w:C, 5x2w:D, 5x2x:A, 5x2x:B, 5x2x:C, 5x2x:D, 5x2z:A, 5x2z:B, 5x2z:C, 5x2z:D, 5x30:A, 5x30:B, 5x30:C, 5x30:D
22 7nl1:D 400 381 0.3695 0.3575 0.3753 4.90e-84 8bis:C, 8bis:A, 8biu:G, 8biu:A, 8biv:A, 8biv:E, 8biw:E, 8biw:A, 8bix:C, 8bix:A, 8biz:E, 8biz:A, 7nl1:A, 7nl1:B, 7nl1:C, 7nl1:E, 7nl1:F, 7nl1:G, 7nl1:H
23 3aej:A 387 363 0.3540 0.3540 0.3774 1.87e-81 3aej:D, 3aej:B, 3aej:C, 3ael:A, 3ael:D, 3ael:B, 3ael:C, 3aem:A, 3aem:D, 3aem:B, 3aem:C, 3aen:A, 3aen:D, 3aen:B, 3aen:C, 3aeo:A, 3aeo:D, 3aeo:B, 3aeo:C, 3aep:A, 3aep:D, 3aep:B, 3aep:C
24 1qgn:A 398 392 0.3747 0.3643 0.3699 1.34e-70 1i41:A, 1i41:C, 1i41:B, 1i41:D, 1i41:E, 1i41:G, 1i41:F, 1i41:H, 1i41:I, 1i41:K, 1i41:J, 1i41:L, 1i43:A, 1i43:C, 1i43:B, 1i43:D, 1i43:E, 1i43:G, 1i43:F, 1i43:H, 1i43:I, 1i43:K, 1i43:J, 1i43:L, 1i48:A, 1i48:C, 1i48:B, 1i48:D, 1i48:E, 1i48:G, 1i48:F, 1i48:H, 1i48:I, 1i48:K, 1i48:J, 1i48:L, 1qgn:C, 1qgn:B, 1qgn:D, 1qgn:E, 1qgn:G, 1qgn:F, 1qgn:H
25 7kb1:A 428 420 0.3385 0.3061 0.3119 8.71e-61 7kb1:B, 7kb1:C, 7kb1:D
26 5ijg:B 403 399 0.3592 0.3449 0.3484 1.48e-59 5ijg:A
27 8wko:A 425 374 0.3230 0.2941 0.3342 7.99e-58 8wko:B, 8wkr:A, 8wkr:B, 8wkr:C, 8wkr:D
28 2ctz:A 421 383 0.3282 0.3017 0.3316 8.38e-53 2ctz:B
29 2cb1:A 404 395 0.3437 0.3292 0.3367 6.61e-51
30 8sad:A 398 389 0.3333 0.3241 0.3316 2.33e-50 8sa7:A, 8sa7:B, 8sa8:A, 8sa8:D, 8sa8:B, 8sa8:C, 8sa9:A, 8sa9:B, 8saa:A, 8saa:B, 8sab:A, 8sab:B, 8sac:A, 8sac:D, 8sac:B, 8sac:C, 8sad:B, 8sae:A, 8sae:B, 8u98:A, 8u98:D, 8u98:B, 8u98:C, 8u99:A, 8u99:B
31 1cl1:B 392 389 0.3178 0.3138 0.3162 6.41e-47 1cl1:A, 1cl2:A, 1cl2:B, 2fq6:A, 2fq6:B, 2gqn:A, 2gqn:B, 4itx:A, 4itx:B
32 8erb:K 429 423 0.3075 0.2774 0.2813 5.51e-44 8erb:A, 8erb:C, 8erb:B, 8erb:D, 8erb:G, 8erb:H, 8erb:F, 8erb:P, 8erb:I, 8erb:J, 8erb:M, 8erb:E, 8erb:Q, 8erb:N, 8erb:L, 8erj:A, 8erj:B, 8erj:C, 8erj:D, 8erj:E, 8erj:F, 8erj:H, 8erj:G
33 7yeo:B 382 383 0.3178 0.3220 0.3211 6.89e-34 7yeo:A
34 8ovh:A 400 379 0.2765 0.2675 0.2823 1.12e-28 8ovh:B, 8ovh:C, 8ovh:D
35 9boh:A 402 262 0.1731 0.1667 0.2557 0.022 9boh:B, 9bow:A, 9bow:B, 9bpe:A, 9bpe:B, 2dkj:A, 2dkj:B, 8ssy:A, 8ssy:B, 8sui:B
36 2x8u:A 399 158 0.0956 0.0927 0.2342 0.031 2x8u:B
37 1j32:A 388 144 0.0853 0.0851 0.2292 0.060 1j32:B
38 1ytm:A 517 270 0.1654 0.1238 0.2370 0.061 1ytm:B
39 4n0w:A 416 254 0.1602 0.1490 0.2441 0.16 4n0w:B, 4n0w:C, 4n0w:D, 4ot8:A, 4ot8:C, 4ot8:B, 4ot8:D, 4otl:A, 4otl:B, 4otl:D, 4otl:C
40 1qz9:A 404 177 0.1292 0.1238 0.2825 0.18
41 8w9z:G 218 82 0.0543 0.0963 0.2561 0.58 8wa0:G, 8wa1:G
42 3aov:A 404 70 0.0568 0.0545 0.3143 0.67 3aov:C, 3aow:A, 3aow:C, 3ath:A, 3ath:C, 3av7:A, 3av7:C, 3wx9:A, 3wx9:C
43 3cq5:B 366 147 0.1008 0.1066 0.2653 0.75 3cq5:A, 3cq5:C, 3cq6:A, 3cq6:C, 3cq6:E
44 2r5c:B 419 60 0.0491 0.0453 0.3167 0.75 2r5e:A, 2r5e:B, 1yiy:A, 1yiy:B
45 9etn:A 551 99 0.0749 0.0526 0.2929 0.91
46 4bmk:A 398 121 0.0801 0.0779 0.2562 1.1 4bmk:B, 2jg2:A, 2w8j:A, 2w8t:A, 2w8u:A, 2w8v:A, 2w8w:A, 2xbn:A
47 5b7u:A 402 137 0.0956 0.0920 0.2701 1.4 5b7u:B, 5b87:A, 5b87:B, 5b89:A, 5b89:B
48 7kz3:D 439 170 0.0956 0.0843 0.2176 1.4 7kz5:A, 7kz5:B, 7kz5:C, 7kz5:D, 7kz6:A, 7kz6:B, 7kz6:C, 7kz6:D, 7kzd:A, 7kzd:B, 7kzd:C, 7kzd:D, 7kzd:E, 7kzd:H, 7kzd:F, 7kzd:G
49 3e2y:A 410 180 0.1137 0.1073 0.2444 1.5 3e2y:B, 3e2z:A, 3e2z:B, 5vep:A, 5veq:A, 5veq:B, 5ver:A, 5ver:B
50 7tlm:A 415 200 0.1059 0.0988 0.2050 1.7 7tlp:B, 7tlp:C, 7tlp:D, 7tlp:E, 7tlp:F, 7tlq:A, 7tlq:B, 7tlr:A, 7tlr:B
51 5wml:A 404 67 0.0491 0.0470 0.2836 2.1 6f5v:A, 6f5v:B, 6f5v:C, 6f5v:D, 5wmh:A, 5wmh:B, 5wmh:C, 5wmh:D, 5wmh:E, 5wmh:F, 5wmi:A, 5wml:B
52 7my6:A 287 226 0.1473 0.1986 0.2522 2.5 7my6:B
53 6l1l:B 393 144 0.0904 0.0891 0.2431 2.6 6l1l:A, 6l1n:A, 6l1n:B, 6l1o:B, 6l1o:A
54 6epc:R 389 66 0.0568 0.0566 0.3333 2.7 6epd:R, 6epe:R, 6epf:R, 5ln3:R, 5t0h:Y, 5vft:Y
55 5txr:A 479 126 0.0930 0.0752 0.2857 2.9 8eim:A, 8eim:B, 5txr:B
56 2zc0:A 405 225 0.1163 0.1111 0.2000 3.0 2zc0:B, 2zc0:C, 2zc0:D
57 1xi9:C 393 65 0.0517 0.0509 0.3077 3.6 1xi9:A, 1xi9:B, 1xi9:D
58 6pd2:C 616 68 0.0568 0.0357 0.3235 3.8 6pd1:A, 6pd1:B, 6pd1:D, 6pd2:A, 6pd2:B, 6pd2:D
59 2oga:A 371 36 0.0362 0.0377 0.3889 4.1 2oga:B, 2oga:C, 2oga:D
60 3isl:A 387 139 0.0930 0.0930 0.2590 5.7 3isl:B
61 9b4h:A 1908 78 0.0543 0.0110 0.2692 5.8 9b4h:B, 8wa2:A, 8wa2:D, 8wa2:F, 8wa2:B, 8wa2:C, 8wa2:E
62 3dyd:A 388 87 0.0568 0.0567 0.2529 6.7 3dyd:B
63 7tlp:A 391 138 0.0801 0.0793 0.2246 7.0
64 7dlw:B 419 113 0.0749 0.0692 0.2566 7.2 7dlw:A, 7dlw:C, 7dlw:D, 7dly:A, 7dly:B
65 8p5n:A 138 43 0.0413 0.1159 0.3721 8.0 8p5n:B
66 6f77:A 399 89 0.0620 0.0602 0.2697 8.4 6f77:C, 6f77:D, 6f77:E, 6f77:F
67 7bsx:A 305 67 0.0517 0.0656 0.2985 8.6 7bsx:B, 7bsx:C, 7bsx:D, 7bsx:E, 7bsx:F, 7bsx:G, 7bsx:H
68 3fvs:B 419 155 0.0827 0.0764 0.2065 9.4 3fvu:A, 3fvu:B, 1w7l:A, 1w7m:A, 1w7n:A, 4wlj:A, 4wlj:B
69 1v2e:A 368 88 0.0672 0.0707 0.2955 9.7 1v2d:A, 1v2e:B, 1v2f:A, 1v2f:B
70 3i16:B 427 55 0.0439 0.0398 0.3091 10.0

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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