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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEAHAD
VAVAALNANKYVFCEKPLAVTAADCQRVIEAEQKNGKRMVQIGFMRRYDKGYVQLKNIIDSGEIGQPLMVHGRHYNASTV
PEYKTPQAIYETLIHEIDVMHWLLNEDYKTVKVYFPRQSSLVTTLRDPQLVVMETTSGINIVVEVFVNCQYGYDIHCDVT
GEKGMAELPTVASAAVRKAAKYSTDILVDWKQRFIDAYDIEFQDFFDRLNAGLPPAGPTSWDGYLAAVTADACVKSQETG
NTEIVELPSKPDFYK

The query sequence (length=335) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3ec7:A 336 335 1.0000 0.9970 1.0000 0.0 3ec7:B, 3ec7:C, 3ec7:D, 3ec7:E, 3ec7:F, 3ec7:G, 3ec7:H
2 4l8v:A 337 336 0.4955 0.4926 0.4940 2.63e-128 4l8v:B, 4l8v:C, 4l8v:D, 3nt2:A, 3nt2:B, 3nt4:A, 3nt4:B, 3nt5:A, 3nt5:B, 3ntq:A, 3ntq:B, 3ntr:A, 3ntr:B
3 4min:A 339 337 0.4090 0.4041 0.4065 3.86e-89 4min:B, 4min:C, 4min:D, 4mio:A, 4mio:B, 4mio:C, 4mio:D, 4miy:A, 4miy:B, 4miy:C, 4miy:D, 4mjl:A, 4mjl:B, 4mjl:C, 4mjl:D
4 3cea:A 342 347 0.2836 0.2778 0.2738 5.32e-35 3cea:B, 3cea:C, 3cea:D
5 4n54:A 340 346 0.2537 0.2500 0.2457 4.67e-22 4n54:B, 4n54:C, 4n54:D
6 3e18:A 348 192 0.1642 0.1580 0.2865 2.54e-19 3e18:B
7 7xre:C 363 179 0.1582 0.1460 0.2961 4.26e-19 7xr9:A, 7xr9:B, 7xr9:C, 7xr9:D, 7xr9:E, 7xr9:F, 7xre:A, 7xre:B, 7xre:D, 7xre:E, 7xre:F
8 2glx:A 332 341 0.2597 0.2620 0.2551 1.58e-16 2glx:B, 2glx:C, 2glx:D, 2glx:E, 2glx:F
9 7x2y:A 342 258 0.2030 0.1988 0.2636 2.38e-16 7x1x:A, 7x1x:B, 7x2y:B
10 4koa:A 333 342 0.2657 0.2673 0.2602 3.21e-15
11 6jw7:A 342 255 0.1910 0.1871 0.2510 7.73e-15 6jw6:A, 6jw6:B, 6jw7:B, 6jw8:A, 6jw8:B
12 1h6d:A 383 151 0.1343 0.1175 0.2980 5.48e-14 1evj:A, 1evj:B, 1evj:C, 1evj:D, 1h6a:A, 1h6a:B, 1h6b:A, 1h6b:B, 1h6c:A, 1h6c:B, 1h6d:C, 1h6d:B, 1h6d:D, 1h6d:E, 1h6d:G, 1h6d:F, 1h6d:H, 1h6d:I, 1h6d:K, 1h6d:J, 1h6d:L, 1ofg:A, 1ofg:D, 1ofg:B, 1ofg:C, 1ofg:E, 1ofg:F, 1ryd:A, 1ryd:B, 1rye:A, 1rye:D, 1rye:B, 1rye:C
13 5a03:C 336 208 0.1493 0.1488 0.2404 4.15e-12 5a02:A, 5a02:B, 5a02:C, 5a02:D, 5a02:E, 5a02:F, 5a03:A, 5a03:B, 5a03:D, 5a03:E, 5a03:F, 5a04:A, 5a04:B, 5a04:C, 5a04:D, 5a04:E, 5a04:F, 5a05:A, 5a05:C, 5a05:D, 5a05:E, 5a05:B, 5a05:F, 5a06:A, 5a06:B, 5a06:C, 5a06:D, 5a06:E, 5a06:F
14 6z3c:AAA 379 196 0.1612 0.1425 0.2755 9.93e-12 6z3b:A, 6z3b:B, 6z3c:BBB
15 9azo:A 315 144 0.1313 0.1397 0.3056 1.12e-11 9azo:B, 9azo:C, 9azo:D, 9azo:E, 9azo:F
16 6o15:A 355 196 0.1522 0.1437 0.2602 1.28e-11 6o15:B
17 6ktk:C 368 156 0.1313 0.1196 0.2821 1.74e-11 6ktk:A, 6ktk:B, 6ktk:D, 6ktl:A, 6ktl:B, 6ktl:C, 6ktl:D, 5ya8:A, 5ya8:B, 5ya8:C, 5ya8:D, 5yap:A, 5yap:B, 5yap:C, 5yap:D, 5yaq:A, 5yaq:B, 5yaq:C, 5yaq:D
18 8tdf:A 452 142 0.1313 0.0973 0.3099 5.02e-11 8tdf:B, 8tdf:C, 8tdf:D, 8tdh:B, 8tdh:C, 8tdh:D, 8tdh:A
19 2o4u:X 331 147 0.1284 0.1299 0.2925 5.76e-11 2poq:X
20 8tdi:G 386 151 0.1224 0.1062 0.2715 6.02e-11 8tdi:L, 8tdi:J, 8tdi:A, 8tdi:C, 8tdi:D, 8tdi:E, 8tdi:F, 8tdi:H, 8tdi:I, 8tdi:B, 8tdi:K
21 3q2k:C 347 150 0.1194 0.1153 0.2667 2.80e-10 3q2k:A, 3q2k:B, 3q2k:D, 3q2k:F, 3q2k:G, 3q2k:H, 3q2k:I, 3q2k:J, 3q2k:M, 3q2k:N, 3q2k:O
22 3q2k:K 322 150 0.1194 0.1242 0.2667 3.29e-10 3q2k:E, 3q2k:L, 3q2k:P
23 2ixa:A 426 159 0.1194 0.0939 0.2516 1.03e-08 2ixb:A
24 3q2i:A 345 150 0.1104 0.1072 0.2467 2.02e-08
25 5uhw:A 342 260 0.1761 0.1725 0.2269 4.99e-08 5uhw:B, 5uhz:A, 5uhz:B, 5ui9:A, 5ui9:B, 5uia:A, 5uia:B, 5uib:A, 5uib:B
26 1zh8:A 325 154 0.1164 0.1200 0.2532 5.29e-08 1zh8:B
27 3m2t:A 342 183 0.1194 0.1170 0.2186 9.31e-08 3m2t:B
28 5b3u:B 317 120 0.1045 0.1104 0.2917 2.84e-07 5b3v:B, 5b3v:A, 5b3v:C, 5b3v:D
29 3dty:A 374 232 0.1731 0.1551 0.2500 1.00e-06 3dty:E
30 6a3j:C 378 160 0.1433 0.1270 0.3000 1.84e-06 6a3g:A, 6a3g:B, 6a3g:C, 6a3g:D, 6a3i:A, 6a3i:B, 6a3i:C, 6a3i:D, 6a3j:A, 6a3j:B, 6a3j:D
31 6t2b:B 439 159 0.1015 0.0774 0.2138 2.80e-06 6t2b:A, 6t2b:C, 6t2b:D
32 8qc6:A 366 153 0.1075 0.0984 0.2353 4.04e-06 8qc3:A, 8qc3:B, 8qc5:A, 8qc5:B, 8qc6:B
33 3rc1:A 325 119 0.0925 0.0954 0.2605 1.60e-05 3rbv:A, 3rc2:A, 3rc7:A, 3rc9:A, 3rcb:A
34 7d5m:A 389 129 0.1045 0.0900 0.2713 2.30e-05 7d5n:A, 7d5n:B
35 8qc8:D 339 112 0.0776 0.0767 0.2321 4.52e-05
36 8qc8:B 367 112 0.0776 0.0708 0.2321 6.26e-05 8qc2:A, 8qc2:B, 8qc2:C, 8qc2:D, 8qc8:C, 8qc8:A
37 4nhe:B 326 144 0.1104 0.1135 0.2569 1.09e-04 4nhe:A, 4nhe:C
38 2h63:D 285 105 0.0806 0.0947 0.2571 2.40e-04 2h63:A, 2h63:B, 2h63:C
39 1lc3:A 292 133 0.0985 0.1130 0.2481 0.025 1lc0:A
40 3o9z:A 310 148 0.0955 0.1032 0.2162 0.060 3o9z:B, 3o9z:C, 3o9z:D, 3oa0:A, 3oa0:B, 3oa0:C, 3oa0:D
41 7cgq:A 306 108 0.0866 0.0948 0.2685 0.18 7cgq:B, 7cgq:C, 7cgq:D, 7cgr:A, 7cgr:B, 7cgr:C, 7cgr:D, 6jnk:A, 6jnk:B, 6jnk:C, 6jnk:D
42 7c5o:O 338 45 0.0567 0.0562 0.4222 0.20 7c5f:O, 7c5f:P, 7c5f:Q, 7c5f:R, 7c5g:O, 7c5g:P, 7c5g:Q, 7c5g:R, 7c5h:O, 7c5h:P, 7c5h:Q, 7c5h:R, 7c5i:O, 7c5i:P, 7c5i:Q, 7c5i:R, 7c5j:O, 7c5j:P, 7c5j:Q, 7c5j:R, 7c5k:O, 7c5k:P, 7c5k:Q, 7c5k:R, 7c5l:O, 7c5l:P, 7c5l:Q, 7c5l:R, 7c5m:O, 7c5m:P, 7c5m:Q, 7c5m:R, 7c5n:O, 7c5n:P, 7c5n:Q, 7c5n:R, 7c5o:P, 7c5o:Q, 7c5o:R, 7c5p:O, 7c5p:P, 7c5p:Q, 7c5p:R, 7c5q:O, 7c5q:P, 7c5q:Q, 7c5q:R, 7c5r:O, 7c5r:P, 7c5r:Q, 7c5r:R, 7c7k:O, 7c7k:P, 7c7k:Q, 7c7k:R
43 3dzd:A 368 45 0.0418 0.0380 0.3111 0.52 3dzd:B
44 6ok4:A 334 42 0.0567 0.0569 0.4524 0.80 6ok4:B, 6ok4:C, 6ok4:D, 6wyc:A, 6wyc:B, 6wyc:C, 6wyc:D, 6x2e:A, 6x2e:C, 6x2e:D
45 5utm:A 345 46 0.0597 0.0580 0.4348 0.90 5jy6:A, 5jy6:B, 5jy6:C, 5jy6:D, 5jya:A, 5jya:B, 5jya:C, 5jya:D, 5jye:A, 5jye:C, 4qx6:A, 4qx6:B, 4qx6:C, 4qx6:D, 5utl:A, 5utl:B, 5utl:C, 5utl:D, 5utm:B, 5utm:C, 5utm:D, 5v8x:A, 5v8x:B, 5v8x:C, 5v8x:D, 5y37:A, 5y37:B
46 5m6d:A 346 46 0.0597 0.0578 0.4348 1.8 6fzh:A, 6fzh:B, 6ite:P, 6ite:Q, 6ite:R, 6ite:O
47 8g5w:A 328 84 0.0746 0.0762 0.2976 2.2 8g5w:B, 8g5w:C, 8g5x:A, 8g5x:B, 8g5x:C, 7js3:A, 7js3:B, 7js3:C, 7txa:A, 7txa:B, 7txa:C, 7txa:D, 7txa:Q, 7txa:U, 7txa:W, 7txa:1, 7txg:A, 7txg:B, 7txg:C, 7txg:D
48 8hmn:D 340 50 0.0597 0.0588 0.4000 2.7 8hmn:A, 8hmn:B, 8hmn:C, 6iqm:A, 6iqm:B, 6iqm:C, 6iqm:D
49 3lvf:P 338 46 0.0597 0.0592 0.4348 4.2 3hq4:R, 3hq4:O, 3hq4:P, 3hq4:Q, 3k73:Q, 3k73:O, 3k73:P, 3k73:R, 3k9q:Q, 3k9q:O, 3k9q:P, 3k9q:R, 3ksd:Q, 3ksd:R, 3ksd:O, 3ksd:P, 3ksz:O, 3ksz:P, 3ksz:R, 3ksz:Q, 3kv3:O, 3kv3:Q, 3kv3:R, 3kv3:P, 3l4s:Q, 3l4s:P, 3l4s:O, 3l4s:R, 3l6o:Q, 3l6o:P, 3l6o:R, 3l6o:O, 3lc1:P, 3lc1:R, 3lc1:O, 3lc1:Q, 3lc2:O, 3lc2:Q, 3lc2:R, 3lc2:P, 3lvf:R, 3lvf:O, 3lvf:Q, 5t73:A, 5t73:B, 5t73:C, 5t73:D, 3vaz:P, 3vaz:R, 3vaz:O, 3vaz:Q, 3vaz:B, 3vaz:A
50 3oa2:B 311 72 0.0597 0.0643 0.2778 4.7 3oa2:A, 3oa2:C, 3oa2:D
51 8hrq:B 336 47 0.0478 0.0476 0.3404 4.8 8hro:A, 8hro:B, 8hrp:A, 8hrp:B, 8hrp:C, 8hrp:D, 8hrp:E, 8hrp:F, 8hrp:G, 8hrp:H, 8hrq:A, 8hrr:A, 8hrr:B, 8hrs:A, 8hrs:B, 8hrs:C, 8hrs:D, 8hrt:A, 8hrt:B, 8hrt:C, 8hrt:D
52 4mvj:B 332 77 0.0746 0.0753 0.3247 4.9 1dc4:A, 1dc4:B, 1dc6:A, 1dc6:B, 1gad:O, 1gad:P, 1gae:O, 1gae:P, 6io6:A, 4mvj:A, 4mvj:C, 4mvj:D, 4mvj:E, 4mvj:F, 4mvj:G, 4mvj:I, 4mvj:J, 4mvj:K, 4mvj:L, 4mvj:M, 4mvj:O, 4mvj:P, 6utm:A, 6utm:B, 6utn:A, 6utn:B, 6uto:A, 6uto:B, 2vyn:A, 2vyn:B, 2vyn:C, 2vyv:A, 2vyv:B, 2vyv:C, 5za0:A
53 8k31:B 79 63 0.0478 0.2025 0.2540 6.1
54 7r7e:A 567 45 0.0418 0.0247 0.3111 6.7 7r7e:B, 7r7f:A, 7r7f:B, 7r7g:A, 7r7g:B
55 8uru:A 363 53 0.0388 0.0358 0.2453 7.8 8urq:A
56 2yj4:B 252 88 0.0537 0.0714 0.2045 7.8 2iye:A, 2iye:C, 2yj3:A, 2yj4:A, 2yj5:A, 2yj5:B, 2yj6:A, 2yj6:B
57 7www:A 336 49 0.0567 0.0565 0.3878 8.7
58 1guz:A 305 82 0.0806 0.0885 0.3293 9.2 1guz:B, 1guz:C, 1guz:D
59 7yw2:A 206 49 0.0448 0.0728 0.3061 10.0

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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