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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
TLERVIKEVQAPALSTPTDEMFWSPEDPSKPNLQFLKQHFYREGRLTEEQALWIIHAGTQILRSEPNLLEMDAPITVCGD
VHGQYYDLMKLFEVGGDPSETRYLFLGDYVDRGYFSIECVLYLWALKIWYPNSLWLLRGNHECRHLTDYFTFKLECKHKY
SERIYEACIESFCALPLAAVMNKQFLCIHGGLSPELHTLEDIKSIDRFREPPTHGLMCDILWADPLEEFGQEKTGDYFVH
NSVRGCSYFFSYPAACAFLEKNNLLSIIRAHEAQDAGYRMYRKTRTTGFPSVMTIFSAPNYLDVYNNKAAVLKYENNVMN
IRQFNCTPHPYWLPNFMDVFTWSLPFVGEKITDMLIAI

The query sequence (length=358) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5b8i:A 359 357 0.9274 0.9248 0.9300 0.0 6tz7:A
2 6tz8:D 373 358 0.8436 0.8097 0.8436 0.0 6tz8:A
3 4il1:A 529 357 0.7207 0.4877 0.7227 0.0 1aui:A, 1aui:B, 9b9g:H, 9b9g:J, 5c1v:A, 5c1v:B, 4f0z:B, 4il1:B, 4il1:C, 4il1:D, 2jog:A, 3ll8:A, 3ll8:B, 3ll8:C, 3ll8:D, 1m63:A, 1m63:B, 1m63:E, 1m63:F, 1mf8:A, 1mf8:B, 6nuc:A, 6nuc:B, 6nuf:A, 6nuf:B, 6nuu:A, 6nuu:B, 4or9:B, 4ora:B, 4orb:A, 4orb:B, 4orc:B, 2p6b:A, 2p6b:C, 2p6b:B, 2p6b:D, 5sve:A, 5sve:B, 1tco:A, 1tco:B, 6uuq:A
4 4or9:A 399 356 0.7067 0.6341 0.7107 0.0 4ora:A, 4orc:A
5 6tz6:A 361 358 0.6844 0.6787 0.6844 0.0 6tz6:D
6 8pq7:C 289 274 0.3128 0.3875 0.4088 2.06e-72 8pq7:A
7 6zej:I 351 275 0.3128 0.3191 0.4073 5.47e-72 6alz:A, 6alz:B, 2bcd:A, 2bdx:A, 6czo:A, 6czo:C, 6dno:A, 8dwk:A, 8dwk:B, 8dwl:C, 8dwl:A, 3e7a:A, 3e7a:B, 3e7b:A, 3e7b:B, 3egg:A, 3egg:B, 3egh:A, 3egh:B, 1fjm:A, 1fjm:B, 6g0i:A, 6g0j:A, 4g9j:A, 4g9j:B, 6ghm:A, 6ghm:B, 3hvq:A, 3hvq:B, 1it6:A, 1it6:B, 1jk7:A, 4mov:A, 4mov:B, 4moy:A, 4mp0:C, 4mp0:A, 3n5u:A, 3n5u:B, 7nzm:B, 2o8g:A, 2o8g:B, 6obn:A, 6obn:B, 6obp:A, 6obq:A, 6obq:B, 6obr:A, 6obr:B, 6obs:A, 6obs:B, 6obu:A, 6obu:B, 7qfb:A, 7sd0:C, 8sw5:A, 8sw5:B, 8sw6:A, 8sw6:B, 7t0y:A, 7t0y:C, 7tvf:F, 7tvf:C, 7txh:C, 7txh:F, 1u32:A, 8u5g:A, 7upi:B, 4ut2:A, 4ut2:B, 4ut3:A, 4ut3:B, 4v0u:D, 4v0u:F, 4v0u:H, 4v0u:J, 4v0u:N, 4v0v:A, 4v0v:C, 4v0w:A, 4v0w:C, 4v0x:A, 3v4y:A, 3v4y:C, 3v4y:E, 3v4y:G, 4xpn:A, 4xpn:C, 6zee:P, 6zee:Q, 6zee:B, 6zee:A, 6zee:I, 6zee:K, 6zef:A, 6zef:B, 6zeg:A, 6zeg:B, 6zeh:A, 6zeh:B, 6zei:A, 6zei:B, 6zej:D, 6zej:A, 6zej:F, 6zej:L, 6zej:O, 6zk6:A, 5zqv:A, 5zqv:B, 5zqv:D, 5zqv:C, 5zt0:A, 5zt0:C, 5zt0:B, 5zt0:D, 5zt0:E, 5zt0:F
8 7obe:A 480 325 0.3687 0.2750 0.4062 6.51e-71 7obe:B
9 7qwj:A 298 274 0.2989 0.3591 0.3905 9.56e-71 8a8f:A
10 1s70:A 309 275 0.2989 0.3463 0.3891 3.38e-69
11 8uwb:C 309 286 0.3212 0.3722 0.4021 5.83e-67 7cun:Q, 3dw8:C, 3dw8:F, 3fga:C, 4i5l:F, 4i5l:C, 4i5n:F, 4i5n:C, 2iae:C, 2iae:F, 2ie3:C, 2ie4:C, 7k36:C, 3k7v:C, 3k7w:C, 4lac:C, 2npp:C, 2npp:F, 6nts:C, 2nyl:C, 2nyl:F, 2nym:C, 2nym:F, 3p71:C, 7pks:q, 8rbx:q, 8rbz:q, 8rc4:q, 8so0:C, 8ttb:C, 8twi:C, 8u1x:C, 8u89:C, 8uwb:F, 5w0w:F, 7ycx:Q
12 1wao:1 471 330 0.3631 0.2760 0.3939 4.74e-66 2bug:A, 8gae:E, 8gft:E, 3h60:A, 3h60:B, 3h61:A, 3h61:D, 3h62:C, 3h62:B, 3h63:A, 3h63:C, 3h64:A, 3h64:D, 3h66:A, 3h66:B, 3h67:A, 3h67:D, 3h68:A, 3h68:D, 3h69:A, 3h69:D, 5hpe:A, 4ja7:A, 4ja9:A, 1s95:A, 1s95:B, 5ui1:A, 5ui1:B, 5ui1:C, 5ui1:D, 1wao:2, 1wao:3, 1wao:4, 5wg8:A, 4zvz:A, 4zvz:B, 4zvz:C, 4zvz:D, 4zx2:A
13 5jpf:A 290 266 0.2933 0.3621 0.3947 8.68e-63
14 3icf:A 316 271 0.3156 0.3576 0.4170 4.47e-59 3icf:B
15 7u0u:A 195 30 0.0838 0.1538 1.0000 8.30e-15 6tz7:B
16 7u0t:A 190 30 0.0698 0.1316 0.8333 1.36e-12
17 1g5b:B 221 71 0.0810 0.1312 0.4085 2.86e-04 1g5b:A, 1g5b:C
18 2dfj:A 267 129 0.0922 0.1236 0.2558 0.040 2dfj:B
19 5vjv:A 298 75 0.0670 0.0805 0.3200 0.070 5vjw:A
20 2z72:A 338 142 0.0978 0.1036 0.2465 0.13 1v73:A, 2zbm:A
21 5ief:A 858 81 0.0587 0.0245 0.2593 0.28 5h9o:A, 5h9o:C, 5hjo:A, 5hjo:C, 5hjr:A, 5hjr:C, 5ied:A, 5iee:A, 5ieg:A, 7jty:A, 7jty:C, 7k9n:A, 7k9n:C, 7k9o:A, 7k9o:C, 7k9q:A, 7k9q:C, 7k9t:A, 7k9t:C, 7kad:A, 7kad:C, 7kb6:A, 7kb6:C, 7kb8:A, 7kb8:C, 7kbj:A, 7kbj:C, 7kbr:A, 7kbr:C, 7kry:A, 7kry:C
22 4j6o:A 261 59 0.0559 0.0766 0.3390 0.71 4j6o:B
23 5uqe:D 507 38 0.0363 0.0256 0.3421 1.4 8bsk:A, 8bsl:A, 8bsl:B, 8bsl:C, 8bsl:D, 8bsm:A, 8bsn:A, 3czd:A, 8ec6:A, 8ec6:B, 8ec6:C, 8ec6:D, 8ec6:E, 8ec6:F, 8ec6:G, 8ec6:H, 5fi2:A, 5fi2:D, 5fi6:A, 5fi6:B, 5fi6:C, 5fi6:D, 5fi7:A, 5fi7:C, 8gwr:B, 5hl1:A, 5hl1:D, 5hl1:B, 5hl1:C, 5i94:A, 5i94:D, 5i94:B, 5i94:C, 4jkt:B, 4jkt:C, 4jkt:A, 4jkt:D, 8jub:A, 8jub:B, 8jub:C, 8jub:D, 8jue:A, 8jue:B, 8jue:C, 8jue:D, 5jyo:D, 5jyo:E, 5jyo:B, 5jyo:C, 5jyo:F, 5jyp:A, 6lox:A, 6lox:D, 6lox:B, 6lox:C, 4o7d:A, 7ren:A, 7ren:B, 7ren:C, 7ren:D, 7rgg:A, 7rgg:B, 7rgg:C, 7rgg:D, 7sbm:A, 7sbm:B, 7sbm:C, 7sbm:D, 7sbn:A, 7sbn:B, 7sbn:C, 7sbn:D, 3ss4:A, 3ss4:B, 3ss4:C, 3ss4:D, 3ss5:A, 3ss5:B, 3ss5:C, 3ss5:D, 8szj:A, 8szj:B, 8szj:C, 8szj:D, 8szj:E, 8szj:G, 8szj:I, 8szj:K, 8szj:F, 8szj:H, 8szj:J, 8szj:L, 6ujg:C, 6ujg:H, 6ujg:D, 6ujg:G, 6ujg:B, 6ujg:E, 6ujg:A, 6ujg:F, 6ujm:A, 6ujm:B, 6ujm:C, 6ujm:D, 6uk6:A, 6uk6:B, 6uk6:C, 6uk6:D, 6ukb:A, 6ukb:B, 6ul9:B, 6ul9:D, 6ula:A, 6ula:B, 6ula:C, 6ula:D, 6ula:F, 6ula:H, 6ula:E, 6ula:G, 6ulj:A, 6ulj:B, 6ulj:C, 6ulj:D, 6umc:C, 6umc:B, 6umd:B, 6umd:D, 6ume:A, 6ume:D, 6umf:A, 6umf:B, 6umf:C, 6umf:D, 3unw:A, 3unw:B, 3unw:C, 3unw:D, 3uo9:A, 3uo9:B, 3uo9:C, 3uo9:D, 5uqe:A, 5uqe:B, 5uqe:C, 5uqe:F, 3voz:A, 3vp0:A, 3vp1:A, 3vp2:A, 3vp3:A, 3vp4:A, 5w2j:B, 5wj6:A, 5wj6:C
24 7egv:A 590 85 0.0642 0.0390 0.2706 1.4 7egv:B, 7ehe:A, 7ehe:B
25 6ms8:G 209 133 0.0838 0.1435 0.2256 1.8 6ms8:A, 6ms8:D, 6ms8:E, 6ms8:F
26 3ozb:A 241 54 0.0447 0.0664 0.2963 4.0 3ozb:B, 3ozb:C, 3ozb:D, 3ozb:E, 3ozb:F
27 5w5i:C 436 46 0.0391 0.0321 0.3043 4.7 5w5i:A
28 1byf:A 123 19 0.0279 0.0813 0.5263 5.5 1byf:B, 1tlg:A, 1tlg:B
29 1ql6:A 281 60 0.0531 0.0676 0.3167 7.0 1phk:A, 2phk:A
30 7o37:C 380 35 0.0335 0.0316 0.3429 7.8 8iao:AC, 8iao:Ac, 8iar:AC, 8iar:Ac, 8ib4:AC, 8ib4:Ac, 8ib7:AC, 8ib7:Ac, 8ib9:AC, 8ib9:Ac, 8ibc:AC, 8ibc:Ac, 8ibd:AC, 8ibd:Ac, 8ibg:AC, 8ibg:Ac, 8ic2:AC, 8ic2:Ac, 8ic5:AC, 8ic5:Ac, 7o37:N, 7o3c:C, 7o3c:N, 7o3e:C, 7o3e:N, 7o3h:C, 7o3h:N, 8pw5:C, 8pw5:N, 8pw6:C, 8pw6:N, 8pw7:C, 8pw7:N
31 6b8s:B 336 158 0.0978 0.1042 0.2215 8.5 6b8s:A
32 6r5k:H 394 39 0.0279 0.0254 0.2564 9.7 6r5k:D, 6r5k:F

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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