BioLiP

>protein
TILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTDDLAEVGRLAGVTQLAGLARYPQPMAPAAAAEHAGMAL
PARDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTADLGTLNHTKLTLEALAAQQVSCAG
LVIGSWPDPPGLVAASNRSALARIAMVRAALPAGAASLDAGDFAAMSAAAFDRNWVAGLV

The query sequence (length=220) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	3fmi:A	231	224	1.0000	0.9524	0.9821	4.18e-149	6cve:A, 6cve:B, 6cve:C, 6cve:D, 6cvf:A, 6cvf:B, 6cvf:C, 6cvf:D, 6cvu:A, 6cvu:B, 6cvu:C, 6cvu:D, 6cvv:A, 6cvv:B, 6cvv:C, 6cvv:D, 6czb:A, 6czb:B, 6czb:C, 6czb:D, 6czc:A, 6czc:B, 6czc:C, 6czc:D, 6czd:A, 6czd:B, 6czd:C, 6czd:D, 6cze:A, 6cze:B, 6cze:C, 6cze:D, 6e05:A, 6e05:B, 6e05:C, 6e05:D, 6e06:A, 6e06:B, 6e06:C, 6e06:D, 3fmf:A, 3fmf:B, 3fmf:C, 3fmf:D, 3fmi:B, 3fmi:C, 3fmi:D, 3fpa:A, 3fpa:B, 3fpa:C, 3fpa:D, 7jt5:A, 7jt5:B, 7jt5:C, 7jt5:D, 7jt6:A, 7jt6:B, 7jt6:C, 7jt6:D, 7l1j:A, 7l1j:B, 7l1j:C, 7l1j:D, 6nka:A, 6nka:B, 6nka:C, 6nka:D, 6nkb:A, 6nkb:B, 6nkb:C, 6nkb:D, 6nl4:A, 6nl4:B, 6nl4:D, 6nl5:A, 6nl5:B, 6nl5:C, 6nl5:D, 6nlz:A, 6nlz:B, 6nlz:C, 6nlz:D, 6nmz:A, 6nmz:B, 6nmz:C, 6nmz:D, 6nn0:A, 6nn0:B, 6nn0:C, 6nn0:D, 6nnz:A, 6nnz:B, 6nnz:C, 6nnz:D, 6nu6:A, 6nu6:B, 6nu6:C, 6nu6:D, 6nvc:A, 6nvc:B, 6nvc:C, 6nvc:D, 6nvd:D, 6nve:A, 6nve:B, 6nve:C, 6nve:D, 6nvf:A, 6nvf:B, 6nvf:C, 6nvf:D, 6nwg:A, 6nwg:B, 6nwg:D, 6nwn:A, 6nwn:B, 6nwn:C, 6nwn:D, 4wop:A, 4wop:C, 4wop:D
2	1a82:A	224	198	0.2727	0.2679	0.3030	2.83e-11	1bs1:A, 1dad:A, 1dae:A, 1daf:A, 1dag:A, 1dah:A, 1dai:A, 1dak:A, 1dam:A
3	3mle:B	224	169	0.1955	0.1920	0.2544	1.40e-08	3mle:A, 3mle:C, 3mle:D, 3mle:E, 3mle:F, 3qxc:A, 3qxh:A, 3qxj:A, 3qxs:A, 3qxx:A, 3qy0:A
4	9fvt:A	519	74	0.1136	0.0482	0.3378	0.097	9fvt:B, 9fvt:C, 9fvt:D
5	8auw:A	2900	73	0.0955	0.0072	0.2877	0.29
6	8atu:A	2837	73	0.0955	0.0074	0.2877	0.30	8atu:B, 8atx:A, 8atx:B, 8auk:A, 8auk:B, 8auw:B
7	3gp8:A	551	55	0.0909	0.0363	0.3636	0.44	3gpl:A, 3gpl:B
8	7t85:A	173	37	0.0591	0.0751	0.3514	3.0
9	2wjy:A	773	38	0.0727	0.0207	0.4211	3.5	2gjk:A, 2gk6:A, 2gk6:B, 2gk7:A, 8rxb:E, 8rxb:A, 8rxb:D, 8rxb:I, 8rxb:L, 8rxb:P, 2wjv:A, 2wjv:B, 2xzo:A
10	3la6:B	260	59	0.0727	0.0615	0.2712	3.7	3la6:A, 3la6:C, 3la6:D, 3la6:E, 3la6:F, 3la6:G, 3la6:H, 3la6:I, 3la6:J, 3la6:K, 3la6:L, 3la6:M, 3la6:N, 3la6:O, 3la6:P
11	4b3g:A	614	85	0.1045	0.0375	0.2706	4.9	4b3g:B
12	6g2g:B	273	33	0.0773	0.0623	0.5152	7.6	6g2g:A
13	5twt:A	291	96	0.1273	0.0962	0.2917	8.3

[Back]