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BioLiP
>protein
TIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYIN

The query sequence (length=72) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2fac:A 77 72 1.0000 0.9351 1.0000 1.08e-45 2fac:B, 2fad:A, 2fad:B, 2fae:A, 4keh:C, 4keh:D, 1l0i:A, 6n3p:I, 6n3p:L, 6n3p:J, 3ny7:B, 7nyw:G, 7nyx:G, 7nyy:G, 7nyz:G, 7nz0:G, 7nz2:G1, 7nz2:G2, 7nz2:G3, 7nz2:G4, 7nz3:G1, 7nz3:G2, 7nz4:G1, 7nz4:G2, 1t8k:A, 5usr:K, 5vcb:f, 5vcb:e, 5vcb:d, 5vcb:F, 5vcb:D, 5vcb:X, 6w1d:C, 6w98:B
2 2eht:A 77 72 0.6667 0.6234 0.6667 7.22e-28
3 2x2b:A 76 68 0.6250 0.5921 0.6618 5.85e-23
4 2qnw:A 80 68 0.5417 0.4875 0.5735 6.95e-23
5 3gzl:A 81 66 0.5417 0.4815 0.5909 1.12e-22 2fq0:A, 2fq2:A, 3gzm:B
6 8jfh:E 79 68 0.5556 0.5063 0.5882 6.75e-21 8jfn:B
7 8e73:AB 85 70 0.5000 0.4235 0.5143 2.19e-18
8 8bee:U 87 70 0.4861 0.4023 0.5000 2.20e-17 7aqr:U, 7arb:U, 8bpx:U, 8bq5:U, 8bq6:U
9 6lvu:A 78 67 0.4722 0.4359 0.5075 6.64e-17 6lvu:B
10 7ar7:T 84 68 0.4722 0.4048 0.5000 2.31e-16 7ar8:T, 8bq6:T
11 7zmb:Q 85 71 0.4861 0.4118 0.4930 5.93e-16 7zm7:O, 7zmb:O, 7zme:Q, 7zmg:O, 7zmg:Q
12 7b0n:U 88 52 0.4306 0.3523 0.5962 8.87e-16 6rfq:Q, 6rfr:Q, 6y79:Q
13 7ak6:U 88 70 0.4306 0.3523 0.4429 1.48e-15 7a5h:w, 7ak6:T, 8c2s:T, 8c2s:U, 8ca3:T, 8ca5:T, 8ca5:U, 6g2j:U, 6g72:U, 5gup:O, 5gup:X, 5lnk:j, 5lnk:X, 6odd:A, 7oi6:w, 7oi8:w, 7oie:w, 8olt:T, 8om1:U, 5ool:w, 5oom:w, 8pw7:T1, 8q0a:T, 8q0a:U, 8q0f:U, 8q0o:U, 8q1p:T, 8q1u:T, 8q1y:U, 8q25:T, 8q45:T, 8q46:T, 8q46:U, 8q47:T, 8q47:U, 8q49:U, 6q9b:AB, 6q9d:AA, 6qa9:AA, 6qa9:AB, 6qbx:AA, 6qbx:AB, 6qc5:AA, 6qc6:AA, 6qc7:AA, 6qc8:AB, 7qsd:T, 7qsl:T, 7qsn:T, 8qu5:w, 7r41:T, 7r43:T, 7r44:T, 7r45:T, 7r46:T, 7r47:T, 7r47:U, 7r48:T, 7r4c:T, 7r4d:T, 7r4f:U, 7r4g:T, 8rgt:T, 8ud1:1U, 8ueo:1T, 8ueo:1U, 8uep:1U, 8ueq:1T, 8ueq:1U, 8uer:1T, 8uer:1U, 8ues:1T, 8ues:1U, 8uet:1T, 8ueu:1T, 8ueu:1U, 8uev:1T, 8uew:1T, 8uew:1U, 8uex:1T, 8uex:1U, 8uey:1T, 8uey:1U, 8uez:1T, 8uez:1U, 8ugh:1U, 8ugi:1U, 8ugj:1U, 8ugn:1T, 8ugn:1U, 8ugn:5U, 8ugr:1U, 8ugr:5T, 8ugr:5U, 7v2d:X, 7v2f:X, 7v2k:X, 7v30:X, 7v32:X, 7v33:G, 7v3m:X, 7vbl:X, 7vbp:X, 7vwj:G, 7vwl:X, 7vy1:X, 7vye:X, 7vyi:X, 7vzv:X, 7w00:X, 7w0h:X, 7w1o:X, 7w1p:X, 7w20:X, 7w2k:X, 7w2l:X, 7w31:G, 7w32:X, 7w35:X, 7w4c:X, 7w4g:X, 7w4j:X, 7w4k:X, 7w4l:X, 7w4n:X, 7zdh:X, 7zdm:j, 7zdm:X, 7zdp:X, 7zdp:j, 6zka:X, 6zkb:X, 6zkc:X, 6zkd:j, 6zke:X, 6zkf:X, 6zkg:X, 6zkh:X, 6zkh:j, 6zki:X, 6zkj:X, 6zkk:X, 6zkl:X, 6zkm:X, 6zkm:j, 6zkn:X, 6zkn:j, 6zko:X, 6zkp:X, 6zkp:j, 6zkr:X, 6zks:X, 6zkt:X, 6zku:X, 6zr2:T, 6zr2:U, 6ztq:U
14 8iuf:AB 88 70 0.4722 0.3864 0.4857 2.20e-15 8j9h:AB, 8j9i:AB, 8j9j:AB
15 8iuf:AC 92 70 0.4861 0.3804 0.5000 1.02e-13 8j9h:AC, 8j9i:AC, 8j9j:AC
16 6sga:Fc 84 68 0.4167 0.3571 0.4412 1.09e-13 6sgb:Fc, 6yxy:EK
17 8ba0:U 85 70 0.3889 0.3294 0.4000 1.08e-11 8ba0:T, 8esz:AC
18 2fva:A 82 68 0.4167 0.3659 0.4412 2.47e-11
19 7arc:U 84 70 0.4028 0.3452 0.4143 2.48e-11 7ard:U
20 2koo:A 81 63 0.3889 0.3457 0.4444 4.02e-11 2kop:A, 2koq:A, 2kor:A, 2kos:A
21 7b0n:T 81 51 0.4167 0.3704 0.5882 2.67e-08 6gcs:O, 7o6y:O, 6rfq:O, 6rfr:O, 6rfs:O, 6y79:O
22 2ll8:A 101 54 0.2500 0.1782 0.3333 3.30e-06
23 6kfu:A 527 71 0.2778 0.0380 0.2817 1.57e-05 6kfm:A, 6kfm:B, 6kfr:A, 6kfr:B
24 8cg6:C 75 56 0.2778 0.2667 0.3571 3.33e-05
25 2k0x:A 86 44 0.2361 0.1977 0.3864 0.001 2kg6:A, 2kg8:A, 2kg9:A, 2kga:A, 2kgc:A, 2kgd:A, 2kge:A, 2mvu:A, 2mvv:A
26 2lki:A 83 58 0.3056 0.2651 0.3793 0.028
27 4h2y:D 63 24 0.1528 0.1746 0.4583 0.043
28 7f2r:B 79 33 0.2083 0.1899 0.4545 0.051
29 4h2w:D 75 24 0.1528 0.1467 0.4583 0.11 4h2x:D
30 7auf:A 89 69 0.3194 0.2584 0.3333 0.26
31 4bph:A 85 27 0.1667 0.1412 0.4444 0.43
32 8fl2:LK 117 30 0.1389 0.0855 0.3333 1.7 8fkp:LK, 8fkq:LK, 8fkr:LK, 8fks:LK, 8fkt:LK, 8fku:LK, 8fkv:LK, 8fkw:LK, 8fkx:LK, 8fky:LK, 8fkz:LK, 8fl3:LK, 8fl4:LK, 8ink:L, 8ipd:L, 8ipx:L, 8ipy:L, 8ir1:L
33 5nz8:A 884 45 0.1944 0.0158 0.3111 3.5
34 8h2w:B 984 45 0.1944 0.0142 0.3111 3.9 8h2w:A, 5nz8:B
35 4hai:A 548 63 0.2500 0.0328 0.2857 4.3 7a7g:A, 7a7g:B, 5ai0:A, 5ai4:A, 5ai5:A, 5ai6:A, 5ai8:A, 5ai9:A, 5aia:A, 5aib:A, 5aic:A, 5ak3:A, 5ak4:A, 5ak5:A, 5ak6:A, 5ake:A, 5akg:A, 5akh:A, 5aki:A, 5akj:A, 5akk:A, 5akl:A, 5akx:A, 5aky:A, 5akz:A, 5ald:A, 5ale:A, 5alf:A, 5alg:A, 5alh:A, 5ali:A, 5alk:A, 5all:A, 5alm:A, 5aln:A, 5alo:A, 5alp:A, 5alq:A, 5alr:A, 5als:A, 5alt:A, 5alu:A, 5alv:A, 5alw:A, 5alx:A, 5aly:A, 5alz:A, 5am0:A, 5am1:A, 5am2:A, 5am3:A, 5am4:A, 5am5:A, 3ans:A, 3ans:B, 3ant:A, 3ant:B, 6aum:A, 4c4x:A, 4c4x:B, 4c4y:A, 4c4z:A, 4c4z:B, 7eba:A, 7eba:B, 5fp0:A, 6fr2:A, 6hgv:A, 6hgw:A, 6hgx:A, 3i1y:A, 3i28:A, 6i5g:A, 6i5g:B, 4j03:A, 4jnc:A, 3koo:A, 5mwa:A, 4ocz:A, 4od0:A, 3otq:A, 7p4k:A, 7p4k:B, 3pdc:A, 3pdc:B, 8qmz:A, 8qmz:B, 8qmz:C, 8qmz:D, 8qn0:A, 8qn0:B, 8qvf:A, 8qvg:A, 8qvh:A, 8qvk:A, 8qvl:A, 8qwi:A, 8qzd:A, 1vj5:A, 3wk4:A, 3wk5:A, 3wk6:A, 3wk7:A, 3wk8:A, 3wk9:A, 3wka:A, 3wkb:A, 3wkc:A, 3wkd:A, 3wke:A, 4x6x:A, 4x6x:B, 4x6y:A, 4x6y:B, 4y2j:A, 4y2p:A, 4y2q:A, 4y2r:A, 4y2s:A, 4y2t:A, 4y2u:A, 4y2v:A, 4y2x:A, 4y2y:A, 6yl4:A, 1zd2:P, 1zd3:A, 1zd4:A, 1zd5:A
36 5alj:A 523 63 0.2500 0.0344 0.2857 4.7
37 5msr:B 520 35 0.2083 0.0288 0.4286 6.7 5msp:A, 5msr:A, 5msr:C, 5msr:D, 5msv:A, 5msv:B, 5msv:C, 5msv:D
38 5mss:A 717 26 0.1528 0.0153 0.4231 8.8 5mst:A, 5mst:B, 5msw:A
39 5kp8:B 78 27 0.1250 0.1154 0.3333 9.2
40 5hv8:A 95 40 0.1806 0.1368 0.3250 9.5

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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