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BioLiP
>protein
TFQVVQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFVKAGPLRNTAYAGSAGSL
AAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQLQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYF

The query sequence (length=160) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8htu:L 163 158 0.7875 0.7730 0.7975 1.12e-91 7ksq:L, 7kux:L, 6l35:L, 7xqp:L
2 4rku:L 163 159 0.9250 0.9080 0.9308 1.65e-89 7dkz:L, 8j6z:L, 8j7a:L, 8j7b:L, 5l8r:L, 3lw5:L, 7wfe:BL, 7wg5:BL, 4xk8:L, 4xk8:l, 4y28:L, 6yac:L, 6yez:L, 6zoo:L, 6zxs:L
3 2o01:L 164 160 0.9000 0.8780 0.9000 2.42e-88 7wfd:AL, 7wg5:AL, 2wsc:L, 2wse:L, 2wsf:L
4 8wgh:L 162 160 0.8313 0.8210 0.8313 2.24e-87
5 5zji:L 166 160 0.8187 0.7892 0.8187 2.02e-79 8bcv:L, 8bcw:L, 7ew6:L, 7ewk:L, 7f9o:L, 7f9o:o
6 7yca:L 158 158 0.6000 0.6076 0.6076 9.27e-62
7 7d0j:L 159 159 0.5875 0.5912 0.5912 2.59e-59 7bgi:L, 7blx:L, 7dz7:L, 7dz8:L, 8h2u:L, 7zq9:L, 7zqc:L, 7zqd:L, 7zqd:L2
8 6zzx:L 157 159 0.5813 0.5924 0.5849 1.23e-57 6zzy:L
9 6igz:L 155 150 0.5625 0.5806 0.6000 3.09e-57
10 6sl5:L 155 152 0.5312 0.5484 0.5592 8.50e-56
11 7a4p:L 140 159 0.5563 0.6357 0.5597 7.69e-53
12 8wm6:L 151 150 0.4750 0.5033 0.5067 1.54e-47 8wmj:L, 8wmv:L, 8wmw:L
13 7y7b:L 150 150 0.4375 0.4667 0.4667 2.31e-45 7y8a:L
14 6jo5:L 118 136 0.4813 0.6525 0.5662 1.22e-43 6ijj:L, 6ijo:L, 6jo6:L, 7zq9:L2
15 8cmo:L 123 134 0.4813 0.6260 0.5746 1.50e-43
16 7y5e:LN 140 148 0.4250 0.4857 0.4595 3.32e-43 7y5e:L2, 7y7a:L7, 7y7a:Lo
17 7fix:L1 152 150 0.4000 0.4211 0.4267 1.25e-41 4fe1:L, 7fix:L2, 7fix:L3, 1jb0:L, 6k33:aL, 6k33:bL, 6k33:cL, 6lu1:L, 7m75:L, 7m76:L, 7m78:L, 3pcq:L, 6pfy:L, 6pfy:h, 6pfy:U, 6pgk:L, 6pgk:h, 6pgk:U, 6tra:L, 6trc:L, 6trc:l, 6trc:0, 6trd:L, 6trd:l, 6trd:0, 5zf0:L1, 5zf0:L2, 5zf0:L3, 5zf0:L4, 5zf0:L6, 5zf0:L5
18 5oy0:L 157 155 0.4188 0.4268 0.4323 2.68e-41 8am5:l, 8asl:l, 8asp:l, 6hqb:L, 4l6v:L, 4l6v:l, 4l6v:8, 6nwa:L, 6nwa:U, 6nwa:l, 5oy0:l, 5oy0:0, 7umh:L, 7umh:U, 7umh:l, 6uzv:L, 6uzv:0, 6uzv:l
19 6tcl:L2 167 155 0.4500 0.4311 0.4645 5.39e-41 6jeo:aL, 6jeo:bL, 6jeo:cL, 6jeo:dL, 6k61:L, 6k61:l, 6tcl:L1, 6tcl:LL, 6tcl:L
20 6fos:L 140 148 0.4125 0.4714 0.4459 5.22e-40 7blz:L, 5zgb:L, 5zgh:L
21 7qco:L 150 151 0.4062 0.4333 0.4305 1.57e-39 7qco:S, 7qco:s, 7qco:l
22 6kif:L 164 157 0.4562 0.4451 0.4650 3.24e-37 6kif:n, 6kif:V, 6kig:L, 6kig:n, 6kig:V
23 6ly5:l 144 150 0.4375 0.4861 0.4667 2.59e-34
24 6kmx:aL 172 155 0.3937 0.3663 0.4065 5.72e-34 6kmx:bL, 6kmx:cL
25 7lx0:U 163 156 0.3750 0.3681 0.3846 6.37e-34 7lx0:L, 7lx0:l, 6pnj:L, 6pnj:U, 6pnj:l
26 7y3f:1 466 141 0.3875 0.1330 0.4397 6.44e-34
27 7dr0:L 131 139 0.3750 0.4580 0.4317 1.16e-33 7dr1:L, 7dr2:aL, 7dr2:bL, 7dr2:cL, 7dr2:dL
28 6l4u:L 137 150 0.4250 0.4964 0.4533 7.83e-32
29 8wey:L 121 134 0.3438 0.4545 0.4104 1.80e-31
30 7coy:aL 147 146 0.3438 0.3741 0.3767 2.44e-28 7coy:cL, 7coy:bL, 7dwq:L
31 6vpv:L 160 142 0.4000 0.4000 0.4507 4.30e-28 6vpv:l, 6vpv:0
32 7s3d:L 170 155 0.3375 0.3176 0.3484 1.83e-27 7s3d:l, 7s3d:U
33 6kmw:aL 144 139 0.3563 0.3958 0.4101 3.44e-27 6kmw:cL, 6kmw:bL
34 7f4v:aL 129 91 0.2375 0.2946 0.4176 1.26e-17 7f4v:cL, 7f4v:bL
35 8jze:l 250 95 0.2500 0.1600 0.4211 1.05e-15 8jzf:l
36 8jjr:l 253 153 0.3063 0.1937 0.3203 7.48e-15
37 8jw0:l 253 137 0.2500 0.1581 0.2920 6.77e-14
38 4our:A 448 92 0.1500 0.0536 0.2609 0.099 4our:B
39 6tby:AAA 320 106 0.1625 0.0813 0.2453 0.13 6tc5:AAA
40 8e77:A 358 72 0.1187 0.0531 0.2639 1.1
41 3js8:A 538 87 0.1437 0.0428 0.2644 2.5
42 7rzw:B 864 84 0.1437 0.0266 0.2738 2.9 7rzw:A
43 7aor:aa 1558 51 0.1187 0.0122 0.3725 4.3
44 4iix:A 338 63 0.1187 0.0562 0.3016 6.3 4iix:B, 4iiy:A, 4iiy:B, 3tlb:A, 3tlb:B, 3tlc:A, 3tlc:B, 3tle:A, 3tle:B, 3tlz:A, 3tlz:B
45 4a2m:B 750 40 0.0938 0.0200 0.3750 6.4 4a2l:E, 4a2m:A, 4a2m:C, 4a2m:D
46 8svc:A 270 30 0.0813 0.0481 0.4333 8.9

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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