Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
TEIATTSGARSVGLLSVGAYRPERVVTNDEICQSSDEWIYTRTGIKTRRFAADDESAASMATEACRRALSNAGLSAADID
GVIVTTNTHFLQTPPAAPMVAASLGAKGILGFDLSAGCAGFGYALGAAADMIRGGGAATMLVVGTEKLSPTIDMYDRGNC
FIFADGAAAVVVGETPFQGIGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDA
AGVRPDQIDVFVPHQFNSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTTGAAKPGDLALLIGYGAGLS
YAAQVVRMPK

The query sequence (length=330) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2qnx:A 334 333 0.9970 0.9850 0.9880 0.0 2qnx:B, 2qny:A, 2qny:B, 2qnz:A, 2qnz:B, 2qo0:A, 2qo0:B, 2qo1:A, 2qo1:B, 2qx1:A, 2qx1:B, 1u6s:A, 1u6s:B
2 1mzj:A 334 319 0.4455 0.4401 0.4608 2.10e-91 1mzj:B
3 6kvs:A 313 324 0.3545 0.3738 0.3611 6.21e-63 6kvs:B
4 4nhd:D 318 318 0.3455 0.3585 0.3585 3.07e-58 4nhd:A, 4nhd:B, 4nhd:C
5 8d1u:A 318 319 0.3485 0.3616 0.3605 1.97e-55 5bnm:A, 5bnr:A, 5bns:A, 5bns:B, 1ebl:A, 1ebl:B, 2eft:A, 2eft:B, 2gyo:A, 1hnd:A, 1hnh:A, 1hnj:A, 1mzs:A, 6x7r:A, 4z8d:A, 4z8d:B
6 8vda:A 311 319 0.3576 0.3794 0.3699 1.12e-54
7 5bqs:A 323 320 0.3030 0.3096 0.3125 1.16e-45 5bqs:B
8 3il5:A 320 318 0.2970 0.3063 0.3082 1.93e-42 3il4:A, 3il4:B, 3il4:C, 3il4:D, 3il5:B, 3il5:C, 3il5:D, 3il6:A
9 4x0o:E 360 324 0.3273 0.3000 0.3333 2.06e-42 5kp2:B, 5v0p:A, 5v0p:B, 4x0o:A, 4x0o:B, 4x0o:D, 4x0o:F, 4x0o:G, 4x0o:H
10 3h77:B 338 334 0.3000 0.2929 0.2964 1.72e-30 3h77:A, 3h78:A, 3h78:B
11 5yo9:B 366 323 0.2485 0.2240 0.2539 8.97e-18 5yoa:B
12 3s20:A 344 319 0.2576 0.2471 0.2665 2.09e-12 6b2u:A, 4ku2:B, 4ku3:B, 4ku5:B, 3s20:B, 3s21:A, 3s23:A, 5vxe:A, 5vxg:A, 5vxi:A
13 6et3:A 309 339 0.2455 0.2621 0.2389 5.56e-11
14 6esq:I 347 323 0.2303 0.2190 0.2353 4.11e-09
15 3t6s:B 342 256 0.2182 0.2105 0.2812 1.25e-05
16 1z1f:A 388 301 0.2333 0.1985 0.2558 2.96e-05
17 5wgc:B 343 314 0.2303 0.2216 0.2420 4.44e-05 5wgc:A, 4xs9:A, 4xs9:B
18 4b0n:A 379 206 0.1727 0.1504 0.2767 2.42e-04 4b0n:B
19 6gw3:A 383 300 0.2091 0.1802 0.2300 0.001 6gw3:B, 6gw3:C, 6gw3:D, 7w6g:C, 7w6g:D
20 6hsj:B 390 108 0.0939 0.0795 0.2870 0.009 6hsp:B
21 2d3m:A 405 288 0.2000 0.1630 0.2292 0.028 2d3m:B, 2d52:A, 2d52:B
22 4jap:C 353 294 0.2242 0.2096 0.2517 0.054 4jao:C, 4jao:B, 4jap:B, 4jap:A, 4jaq:D, 4jaq:A, 4jaq:C, 4jaq:B, 4jd3:C, 4jd3:B
23 7d41:A 367 172 0.1333 0.1199 0.2558 0.081 7d41:B
24 3wd7:A 401 345 0.2303 0.1895 0.2203 0.093 7cct:A, 6l7j:A, 3wd7:B
25 5gk1:A 379 325 0.2212 0.1926 0.2246 0.13 5gk1:C
26 7rsw:B 125 54 0.0576 0.1520 0.3519 0.16
27 1xes:A 387 305 0.2061 0.1757 0.2230 0.17 1xes:B, 1xes:C, 1xes:D, 1xet:B, 1xet:C, 1xet:D
28 7s04:A 396 46 0.0545 0.0455 0.3913 0.33
29 6op5:A 383 128 0.1030 0.0888 0.2656 0.52 6op5:B
30 7zme:5 670 46 0.0394 0.0194 0.2826 0.59 7zmg:5
31 1ee0:A 376 294 0.1848 0.1622 0.2075 0.67 1ee0:B
32 7bur:B 389 128 0.1121 0.0951 0.2891 0.70 7bur:A, 8jrd:A, 8jrd:B
33 6hs0:B 201 46 0.0545 0.0896 0.3913 0.94 6c31:E, 6c31:F, 6c31:G, 6c31:H, 6c31:A, 6c31:B, 6c31:C, 6c31:D, 6hrw:A, 6hrx:A, 6hrx:B, 6hry:A, 6hry:B, 6hrz:A, 6hs0:A, 6hs1:B, 6hs2:B, 5icj:A, 5icj:B, 5n7o:A, 5n7o:B
34 7f08:J 379 251 0.1758 0.1530 0.2311 1.0 7f08:B, 7f08:D, 7f08:L
35 1wl4:A 394 97 0.0758 0.0635 0.2577 3.3
36 2w4o:A 278 72 0.0727 0.0863 0.3333 3.4
37 3awj:A 380 171 0.1212 0.1053 0.2339 3.7
38 5wx3:C 353 129 0.1061 0.0992 0.2713 3.9
39 5wx6:B 376 129 0.1061 0.0931 0.2713 4.2 5wx3:A, 5wx3:B, 5wx3:D, 5wx6:A, 5wx6:C, 5wx6:D, 5wx7:A, 5wx7:B, 5wx7:C, 5wx7:D
40 6j1m:A 381 72 0.0697 0.0604 0.3194 4.2 6j1m:B, 6j1n:A, 6j1n:B
41 8cp2:A 600 50 0.0515 0.0283 0.3400 4.4 8cp2:B, 8cp5:A, 8cp5:B
42 7yj6:A 390 66 0.0636 0.0538 0.3182 4.5 7yj5:A, 7yj6:B, 7yj7:A, 7yj8:A, 7yj9:A, 7yja:A, 7yja:B, 7yjb:A
43 4yzo:C 347 101 0.0727 0.0692 0.2376 5.2 4yzo:D
44 7vf0:B 396 129 0.0970 0.0808 0.2481 5.4 7vez:A, 7vez:B, 7vez:C, 7vez:D, 7vf0:A, 7vf0:C, 7vf0:D
45 8v8m:A 389 66 0.0667 0.0566 0.3333 5.5 8v8m:C
46 7lld:A 446 49 0.0515 0.0381 0.3469 6.3 7lld:B, 7lle:A, 7lle:B
47 4jv3:A 407 59 0.0545 0.0442 0.3051 6.5 3mqd:A, 3u0e:A, 3u0f:A
48 7o4t:D 403 170 0.1273 0.1042 0.2471 6.6 4b3i:C, 4b3j:C, 4b3j:D, 7o1i:D, 7o1l:D, 7o4r:C, 7o4r:D, 7o4s:C, 7o4s:D, 7o4t:C, 8opu:C, 8opu:D, 8opx:C, 8opx:D, 8opy:D, 8oql:C, 8oql:D, 8oqm:D, 8oqo:C, 8oqo:D, 8oqp:C, 8oqp:D, 8oqs:C, 8oqs:D, 8pf8:C, 8pf8:D
49 8agd:A 1111 106 0.0970 0.0288 0.3019 7.1 8acq:A, 8acq:C, 8acq:B, 8ae1:A, 8ae1:B, 8ae1:C, 8agd:C, 8agd:B, 7zgy:A, 7zgy:C, 7zgy:B
50 1chw:A 389 296 0.2000 0.1697 0.2230 7.1 1bq6:A, 1cgk:A, 1cgz:A, 1chw:B, 1cml:A, 1d6h:A, 1u0w:A, 1u0w:B, 1u0w:C, 1u0w:D

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218