BioLiP

>protein
TEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNL
KGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIHSEEDE
RPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQPEVKEE
KPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENW

The query sequence (length=316) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	3iyd:A	322	316	0.9842	0.9658	0.9842	0.0	6b6h:I, 7beg:B, 7c17:A, 7c97:K, 7chw:K, 5ciz:B, 7dy6:K, 8ftd:R, 8igr:G, 7khc:A, 7khc:B, 1lb2:B, 1lb2:E, 7mkd:R, 7mkj:R, 3n4m:B, 3n4m:C, 6n4c:A, 6n4c:B, 3n97:B, 3n97:C, 6oul:R, 6psq:M, 6psr:M, 6pss:M, 6pst:M, 6psu:M, 6psv:M, 6psw:M, 8tom:M, 8u3b:A, 7w5x:A, 7w5y:A, 8y6u:I
2	7ye1:A	307	318	0.5000	0.5147	0.4969	5.79e-102	7ye2:A
3	8dy9:B	319	314	0.4304	0.4263	0.4331	7.12e-77
4	5d4c:K	231	225	0.3354	0.4589	0.4711	1.30e-54	2a68:A, 2a68:B, 2a68:K, 2a68:L, 2a69:A, 2a69:B, 2a69:K, 2a69:L, 5d4c:B, 5d4c:L, 5d4d:L, 5e17:B, 5e18:B, 7eh0:B, 7eh1:B, 4g7h:B, 1iw7:A, 1iw7:B, 1iw7:K, 1iw7:L, 6kqd:B, 6kqd:K, 6kqe:B, 6kqf:B, 6kqg:B, 6kqh:B, 6kqm:B, 6kqn:B, 6l74:B, 6lts:B, 7mlb:B, 7mli:B, 7mlj:B, 4oin:B, 4oip:B, 7rdq:B, 1smy:A, 1smy:B, 5vo8:B, 8w8n:B, 8w8o:B, 8w8p:B, 5x21:A, 5x22:B, 5x22:L
5	8hih:G	57	49	0.0918	0.5088	0.5918	5.07e-14	6ccv:T, 5tw1:T, 5vi8:T, 6vvs:T, 6vvv:T
6	8hil:C	300	48	0.0538	0.0567	0.3542	1.4	7eu0:C, 8him:C, 8xmb:C, 8xmc:C, 8xmd:C
7	4ywt:A	411	82	0.0823	0.0633	0.3171	1.8	4bwe:A, 4bwe:C, 4ywt:C
8	6hiw:DC	1095	45	0.0475	0.0137	0.3333	7.4
9	8hyj:C	285	49	0.0506	0.0561	0.3265	10.0

[Back]