Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
TECDREPIHIPGAIQPHGYLFVVSETDLRIASVSANVEDLLRQPPASLLNVPIAHYLTAASAARLTHALHGAINPIRLDV
VTPDGERAFNGILHRHDSIVILELEPRDESRYTNEFFRSVRVAIRRLQTAADLPTACWIAASEVRRITGFDRIKVYQFAA
DWSGQVIAEDRDSGIPSLLDFHFPSSDIPAQSRALYTINPVRIIPDIGYRPSPLVPDINPRLGGPIDLSFSVLRSVSPTH
LEYMVNMGMHAAMSISIVRDNRLWGMISCHNLTPRFVSYEVRQACELIAQVLTWQIGVLEEAEI

The query sequence (length=304) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 4r70:A 498 308 1.0000 0.6104 0.9870 0.0 2ool:A, 2ool:B, 4r70:B
2 4r6l:A 473 304 0.5461 0.3510 0.5461 1.26e-107 4e04:A, 4e04:B, 4r6l:B, 4s21:A, 4s21:B
3 6bap:A 505 311 0.4836 0.2911 0.4727 2.94e-85 6baf:A, 6bak:A, 6bao:A, 6bao:B, 6bap:B, 6bap:C, 6bay:A, 6bay:B, 6bay:C, 4rq9:A
4 8u64:A 487 304 0.4243 0.2649 0.4243 5.20e-74 8u64:B, 8u65:B, 8u65:A
5 8u8z:A 517 307 0.4276 0.2515 0.4235 6.52e-74 8u4x:A, 8u4x:B, 8u62:B, 8u62:A, 8u63:A, 8u63:B, 8u8z:B
6 7jr5:A 482 297 0.4309 0.2718 0.4411 1.08e-71 7jr5:B, 7jri:A, 7jri:B, 6ptq:A, 6ptq:B, 6ptx:A, 6ptx:B, 6pu2:A, 6pu2:B
7 7l5a:A 477 305 0.4079 0.2600 0.4066 1.34e-70
8 8upk:A 739 297 0.4342 0.1786 0.4444 3.58e-70 8uph:A, 8uph:B, 8upk:B, 8upm:A, 8upm:B
9 5hsq:A 488 304 0.3947 0.2459 0.3947 1.59e-69 8co5:A, 5i5l:A, 6r26:A, 6r27:A, 6r27:B, 6r27:C, 6r27:D
10 6pl0:B 608 305 0.4112 0.2056 0.4098 1.63e-68 5akp:A, 5akp:B, 7l59:A, 6ndo:A, 6ndo:B, 6ndp:A, 6ndp:B, 6pl0:A, 5uyr:A, 5uyr:B
11 9eut:A 728 308 0.3947 0.1648 0.3896 4.08e-61 3c2w:A, 3c2w:B, 3c2w:C, 3c2w:D, 3c2w:E, 3c2w:F, 3c2w:G, 3c2w:H, 9eut:B, 9euy:A, 9euy:B, 3g6o:A, 3g6o:B, 3ibr:A, 3ibr:B, 3nhq:A, 3nhq:B, 3nhq:C, 3nhq:D, 3nhq:E, 3nhq:F, 3nhq:G, 3nhq:H, 3nop:C, 3not:C, 3nou:C
12 2vea:A 500 303 0.3651 0.2220 0.3663 3.26e-59
13 4gw9:A 628 308 0.3783 0.1831 0.3734 8.97e-58 4gw9:B, 4gw9:C, 4gw9:D, 5oy5:A, 5vik:A, 5viq:A, 5viv:A, 4xtq:A
14 6g1y:B 493 303 0.3684 0.2272 0.3696 1.86e-56 6g1y:A, 6g1z:A, 6g1z:B, 6g20:A, 6g20:B
15 8avw:B 579 308 0.3717 0.1952 0.3669 1.11e-51 8avw:A
16 6et7:A 646 291 0.3388 0.1594 0.3540 2.02e-51 6et7:B
17 6fht:B 735 308 0.3750 0.1551 0.3701 2.11e-51 5ajg:A, 8avv:A, 8avv:B, 8avx:A, 8avx:B, 8bor:A, 8bor:B, 8bor:C, 8bor:D, 8c3i:B, 8c3i:A, 5c5k:A, 5c5k:B, 5c5k:C, 5c5k:D, 4cqh:A, 6fht:A, 6ftd:A, 6ftd:B, 4ijg:A, 5k5b:A, 5l8m:A, 5lbr:A, 5mg0:A, 5mg1:A, 5nfx:A, 5nm3:A, 5nm3:B, 5nm3:C, 5nm3:D, 5nwn:A, 5nwn:B, 5nwn:C, 5nwn:D, 4o01:A, 4o01:B, 4o01:C, 4o01:D, 4o0p:A, 4o0p:B, 4o8g:A, 2o9b:A, 2o9c:A, 4q0h:A, 4q0i:A, 4q0j:A, 3s7n:A, 3s7o:A, 3s7p:A, 3s7q:A, 8sgk:A, 8sgk:B, 6t3l:B, 6t3l:A, 6t3u:B, 6t3u:A, 4y3i:A, 4y5f:A, 4z1w:A, 7z9d:A, 7z9e:A, 4zrr:A, 1ztu:A
18 5llw:B 673 291 0.3388 0.1530 0.3540 3.16e-51 5llw:A, 5llx:A, 5llx:B, 5lly:D, 5lly:A, 5lly:C, 5lly:B, 6saw:A, 6saw:B, 6saw:C, 6saw:D, 6saw:E, 6saw:F, 6saw:G, 6saw:H, 6sax:B, 6sax:A
19 6tc7:BBB 319 306 0.3322 0.3166 0.3301 2.73e-42 6tc7:AAA
20 6tby:AAA 320 303 0.3224 0.3063 0.3234 9.75e-42 6tc5:AAA
21 8iff:A 868 303 0.3257 0.1141 0.3267 1.49e-41 8f5z:B, 8f5z:A, 8iff:B, 8isj:A, 8isj:B
22 6tl4:A 496 298 0.3125 0.1915 0.3188 1.02e-39
23 4our:A 448 305 0.3059 0.2076 0.3049 9.26e-39 4our:B
24 7rzw:B 864 303 0.3059 0.1076 0.3069 3.37e-38 7rzw:A
25 8isk:B 848 296 0.2993 0.1073 0.3074 3.03e-37 8isk:A
26 2k2n:A 172 159 0.1711 0.3023 0.3270 3.58e-23 2lb9:A
27 6ozb:C 193 184 0.2007 0.3161 0.3315 1.24e-21 6ozb:A, 6ozb:B
28 4bwi:A 381 182 0.1743 0.1391 0.2912 2.08e-21 4bwi:B
29 6xhh:B 180 153 0.1118 0.1889 0.2222 5.44e-08 6xhg:A, 6xhg:B, 6xhh:A
30 7lsd:B 152 148 0.1086 0.2171 0.2230 4.69e-06 7lsd:A, 7lsd:C, 7lsd:D
31 3w2z:A 178 143 0.1118 0.1910 0.2378 0.002 5zoh:A
32 7lsc:A 161 148 0.1086 0.2050 0.2230 0.026 7lsc:B, 7lsc:C, 7lsc:D, 6mgh:A, 6mgh:B, 6mgh:C, 6mgh:D, 6mgh:E, 6mgh:F, 6mgh:G, 6mgh:H
33 5m85:A 159 160 0.1217 0.2327 0.2313 0.048 5m82:A
34 4fof:A 168 145 0.1086 0.1964 0.2276 0.096 4glq:A, 2m7u:A, 2m7v:A, 6p58:A, 6p58:B, 6pru:A, 6pru:B, 6pry:A, 6pry:B, 6upp:A, 6upp:B, 3vv4:A, 3vv4:B
35 6bhn:A 156 136 0.0888 0.1731 0.1985 0.11 6bho:A
36 6ob8:A 307 52 0.0559 0.0554 0.3269 0.23 6oap:A, 6oap:B, 6oaq:A, 6oaq:B, 6ob8:B
37 4uhf:A 278 122 0.0921 0.1007 0.2295 3.3 4uhd:A, 4uhe:A
38 4dl8:A 224 42 0.0461 0.0625 0.3333 3.4 4dk4:A, 4dk4:B, 4dkb:A, 4dlc:A
39 7s2k:A 268 38 0.0461 0.0522 0.3684 4.0 7s2k:B
40 7xc4:A 127 91 0.0789 0.1890 0.2637 5.5 7xc4:B
41 3imi:A 143 44 0.0395 0.0839 0.2727 7.5 3imi:B, 3imi:C, 3imi:D

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218