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BioLiP
>protein
TASVALIENLQREELSSIEEAHAYARLLELHDLTQEALAQRLGKGQSTIANKLRLLKLPQPVQEAIMEKKITERHARALI
PLKQPELQVTLLTEIIEKSLNVKQTEDRVVKMLEQG

The query sequence (length=116) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7ol9:B 203 116 1.0000 0.5714 1.0000 1.52e-76 7ol9:A, 6y93:A, 6y93:B
2 1vz0:B 192 103 0.4828 0.2917 0.5437 5.46e-26 1vz0:A, 1vz0:C, 1vz0:D
3 6sdk:A 199 103 0.4483 0.2613 0.5049 4.65e-24 6sdk:B, 6sdk:C, 6sdk:D
4 7bnr:B 196 104 0.4138 0.2449 0.4615 2.86e-22 7bnk:A, 7bnk:B, 7bnr:A, 7o0n:A, 7o0n:B
5 4umk:D 176 104 0.4224 0.2784 0.4712 6.38e-22 4umk:A
6 6s6h:B 140 103 0.3707 0.3071 0.4175 2.54e-13
7 6t1f:C 195 103 0.3707 0.2205 0.4175 6.78e-13 7bm8:A, 7bm8:B, 6s6h:A, 6t1f:A, 6t1f:B, 6t1f:D
8 8qa8:B 202 68 0.1810 0.1040 0.3088 0.061 8qa8:A, 8qa8:C, 8qa8:D, 8qa8:E, 8qa8:F, 1r71:A, 1r71:B, 1r71:C, 1r71:D
9 7tdv:C 443 67 0.2069 0.0542 0.3582 0.45 7tdv:A, 7tdv:D, 7tdv:E, 7tdv:B, 7tdv:H, 7tf6:C, 7tf6:O, 7tf6:R, 7tf6:F, 7tf6:N, 7tf6:H, 7tf6:L, 7tf6:T, 7tf6:A, 7tf6:S, 7tf6:G, 7tf6:B
10 4c0b:B 430 40 0.1293 0.0349 0.3750 1.6 4c0b:A, 4c0h:A, 2npi:A, 2npi:B, 4oi4:A, 4oi4:C
11 7l1k:B 660 69 0.1466 0.0258 0.2464 1.6
12 1tyo:A 427 43 0.1293 0.0351 0.3488 1.9 1xkd:A, 1xkd:B
13 6ayh:A 192 61 0.1638 0.0990 0.3115 1.9
14 6b9t:D 453 66 0.1724 0.0442 0.3030 2.9 6b9s:A, 6b9s:D, 6b9s:C, 6b9s:G, 6b9s:E, 6b9t:A, 6b9t:B, 6b9t:C, 6b9t:E, 6b9t:F, 6b9t:G, 6b9t:H
15 8h2w:B 984 39 0.1207 0.0142 0.3590 3.3 8h2w:A, 5nz8:B
16 4jcw:B 202 22 0.0603 0.0347 0.3182 4.1 4jcw:A, 4l48:A, 4l48:C
17 5z87:A 756 79 0.1638 0.0251 0.2405 4.4 5z87:B
18 7pub:CJ 803 29 0.1121 0.0162 0.4483 4.4 6hiv:CJ, 6hiw:CJ, 6hiz:CJ, 7pua:CJ
19 8ebw:H 532 59 0.1552 0.0338 0.3051 4.5 8ebs:H, 8ebt:H, 8ebv:H, 8ebx:H
20 6z1p:BD 107 26 0.0862 0.0935 0.3846 5.4
21 5jb2:A 670 85 0.2155 0.0373 0.2941 6.4 5jaj:A, 5jbg:A
22 7aor:e 810 27 0.0948 0.0136 0.4074 6.8
23 6ikg:A 644 29 0.0948 0.0171 0.3793 7.3 6ikg:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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