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BioLiP
>protein
TAAYLPPILVPLVGLIFPAISMALLFIYIEQ

The query sequence (length=31) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 7y5e:IN 31 31 1.0000 1.0000 1.0000 8.88e-15 7y5e:I2, 7y7a:I7, 7y7a:Io
2 8htu:I 34 31 0.7742 0.7059 0.7742 1.69e-11 7ksq:I, 7kux:I, 6l35:I, 7xqp:I
3 6l4u:I 35 31 0.7419 0.6571 0.7419 2.89e-10
4 8wm6:I 34 31 0.7419 0.6765 0.7419 3.86e-10 8wmj:I, 8wmv:I, 8wmw:I
5 7y7b:I 33 31 0.7419 0.6970 0.7419 8.21e-10 7y8a:I
6 6igz:I 32 31 0.7097 0.6875 0.7097 1.31e-09
7 7qco:I 39 31 0.6774 0.5385 0.6774 1.54e-09 7qco:P, 7qco:p, 7qco:i
8 7a4p:I 35 31 0.6452 0.5714 0.6452 2.23e-09 6zzx:I, 6zzy:I
9 8am5:i 40 30 0.6129 0.4750 0.6333 9.09e-09 8asl:i, 8asp:i, 6hqb:I, 4l6v:I, 4l6v:i, 4l6v:9, 6nwa:I, 6nwa:i, 6nwa:R, 5oy0:I, 5oy0:i, 5oy0:h, 7umh:I, 7umh:R, 7umh:i, 6uzv:I, 6uzv:i, 6uzv:h
10 7yca:I 35 31 0.6452 0.5714 0.6452 2.19e-08
11 7wfd:AI 33 31 0.6129 0.5758 0.6129 2.25e-07 8j6z:I, 8j7a:I, 8j7b:I, 7wfe:BI, 7wg5:AI, 7wg5:BI
12 7dr0:I 30 26 0.6129 0.6333 0.7308 3.70e-07 7dr1:I, 7dr2:aI, 7dr2:bI, 7dr2:cI, 7dr2:dI
13 6kif:I 38 30 0.6452 0.5263 0.6667 6.36e-07 6kif:S, 6kif:k, 6kig:I, 6kig:S, 6kig:k
14 8wey:I 32 31 0.6129 0.5938 0.6129 6.88e-07 7blz:I, 5zgb:I, 5zgh:I
15 8bcv:I 33 27 0.5484 0.5152 0.6296 1.00e-06 8bcw:I, 7ew6:I, 7ewk:I, 7f9o:I, 7f9o:l, 5zji:I
16 6ly5:i 33 27 0.5161 0.4848 0.5926 2.12e-06 7dkz:I, 5l8r:I, 3lw5:I, 2o01:I, 2wsc:I, 2wse:I, 2wsf:I, 4xk8:i, 6yac:I, 6yez:I, 6zoo:I, 6zxs:I
17 7dz7:I 42 29 0.5161 0.3810 0.5517 2.26e-06 7bgi:I, 7blx:I, 8cmo:I, 7d0j:I, 7dz8:I, 6ijj:I, 6ijo:I, 6jo5:I, 6jo6:I, 7r3k:I, 7zq9:I, 7zq9:I2, 7zqc:I, 7zqd:I, 7zqd:I2
18 6vpv:I 38 31 0.5806 0.4737 0.5806 2.93e-06 6vpv:i, 6vpv:7
19 6kmw:aI 38 30 0.4839 0.3947 0.5000 7.80e-05 6kmw:cI, 6kmw:bI
20 6sl5:I 39 28 0.4194 0.3333 0.4643 2.87e-04
21 4fe1:I 38 29 0.4516 0.3684 0.4828 7.25e-04 7fix:I1, 7fix:I2, 7fix:I3, 1jb0:I, 6k33:aI, 6k33:bI, 6k33:cI, 6lu1:I, 7m75:I, 7m76:I, 7m78:I, 3pcq:I, 6pfy:I, 6pfy:R, 6pfy:e, 6pgk:I, 6pgk:R, 6pgk:e, 6tra:I, 6trc:I, 6trc:7, 6trc:i, 6trd:I, 6trd:7, 6trd:i, 5zf0:I1, 5zf0:I2, 5zf0:I3, 5zf0:I4, 5zf0:I5, 5zf0:I6
22 6k61:I 34 31 0.3871 0.3529 0.3871 0.001 6jeo:aI, 6jeo:bI, 6jeo:cI, 6jeo:dI, 6k61:i, 6tcl:I1, 6tcl:I2, 6tcl:I, 6tcl:II, 7y3f:I
23 8jze:i 119 21 0.3226 0.0840 0.4762 0.006 8jzf:i
24 8jjr:i 120 21 0.3226 0.0833 0.4762 0.029
25 7lx0:R 42 30 0.4194 0.3095 0.4333 0.063 7lx0:I, 7lx0:i, 6pnj:I, 6pnj:R, 6pnj:i
26 7s3d:I 42 30 0.3871 0.2857 0.4000 0.14 7s3d:i, 7s3d:R
27 7coy:aI 30 27 0.3871 0.4000 0.4444 0.37 7coy:bI, 7coy:cI
28 6kmx:aI 41 30 0.3871 0.2927 0.4000 0.42 6kmx:cI, 6kmx:bI

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218