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BioLiP
>protein
SVYFDLEDIANTTGQWDVYGSDAPSPYNGLQSKFFETFAAPFTKRGLLLKFLLLGGGATLAFVSSQATGDDLPIVKGPQL
PPQPGPRGKI

The query sequence (length=90) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8wgh:H 90 90 1.0000 1.0000 1.0000 3.34e-61
2 6yez:H 93 87 0.8111 0.7849 0.8391 4.27e-49 7dkz:H, 5l8r:H, 3lw5:H, 4rku:H, 4y28:H, 6yac:H, 6zoo:H, 6zxs:H
3 4xk8:H 90 90 0.8000 0.8000 0.8000 1.28e-48 4xk8:h
4 7wfd:AH 95 90 0.8000 0.7579 0.8000 1.32e-48 8j6z:H, 8j7a:H, 8j7b:H, 2o01:H, 7wfe:BH, 7wg5:AH, 2wsc:H, 2wse:H, 2wsf:H
5 8htu:H 95 89 0.6111 0.5789 0.6180 3.73e-36 7ksq:H, 7kux:H, 6l35:H, 7xqp:H
6 5zji:H 95 90 0.8444 0.8000 0.8444 1.95e-29 8bcv:H, 8bcw:H
7 6zzx:H 94 90 0.4778 0.4574 0.4778 1.04e-23 6zzy:H
8 7d0j:H 100 91 0.4000 0.3600 0.3956 1.01e-15 7dz7:H, 7dz8:H, 8h2u:H, 6ijo:H
9 6sl5:H 92 90 0.3889 0.3804 0.3889 3.66e-15
10 7yca:H 96 91 0.4556 0.4271 0.4505 3.76e-14
11 6igz:H 88 87 0.4111 0.4205 0.4253 5.75e-14
12 6ztl:AO 89 39 0.1556 0.1573 0.3590 1.7 4a2i:O, 8a3l:O, 7abz:t, 7ac7:t, 7acj:t, 7acr:t, 4adv:O, 5afi:o, 7afi:O, 7afl:O, 7afo:O, 8akn:P, 8am9:P, 6awb:R, 6awc:R, 6awd:R, 9ax7:O, 9ax8:o, 8aye:O, 8b0x:O, 7b5k:o, 8b7y:t, 8bd5:X, 8bf7:s, 8bge:s, 8bgh:s, 8bh4:s, 8bhj:s, 8bhl:s, 8bhn:s, 8bhp:s, 8bil:s, 8bim:s, 7bod:O, 7boe:O, 7bof:O, 7bog:O, 7boh:O, 7boi:O, 6bu8:O, 6by1:AO, 6by1:BO, 6c4i:o, 8cai:O, 8cep:O, 8cgj:O, 8cgr:O, 8cgu:O, 9cg5:O, 9cg6:O, 9cg7:O, 7cpj:o, 7d6z:v, 7d80:P, 6dnc:BB, 8ea3:S, 8ea4:S, 8eiu:O, 8ekc:o, 8emm:O, 6enf:o, 6enj:o, 6enu:o, 8eyq:O, 8eyt:U, 9fbv:O, 8fiz:AR, 8fto:O, 8fzd:o, 8fze:o, 8fzf:o, 8fzg:o, 8fzh:o, 8fzi:o, 8fzj:o, 8g2u:n, 8g31:n, 8g34:n, 8g38:n, 8g6w:O, 8g7p:o, 8g7q:o, 8g7r:o, 8g7s:o, 8ghu:o, 6gwt:o, 6gxm:o, 6gxn:o, 6gxo:o, 6gxp:o, 6h4n:o, 5h5u:v, 6h58:o, 6h58:oo, 6hrm:t, 8hsp:O, 8htz:O, 8hu1:O, 6i7v:AO, 6i7v:BO, 8ifb:O, 8ifc:O, 5iqr:t, 5it8:AO, 5it8:BO, 5j5b:AO, 5j5b:BO, 5j7l:AO, 5j7l:BO, 5j88:AO, 5j88:BO, 5j8a:AO, 5j8a:BO, 3j9y:o, 3j9z:SO, 5j91:AO, 5j91:BO, 3ja1:SO, 3jbu:O, 3jbv:O, 3jcd:o, 3jce:o, 3jcj:u, 3jcn:p, 5jc9:AO, 5jc9:BO, 7jss:T, 7jsw:T, 7jsz:T, 8jsg:u, 8jsh:u, 5jte:AO, 7jt1:T, 7jt2:T, 7jt3:T, 5ju8:AO, 7k00:O, 8k3o:O, 8k4e:O, 7k50:T, 7k51:T, 7k52:T, 7k53:T, 7k54:T, 7k55:T, 5kcr:1o, 5kcs:1o, 5kps:20, 5kpv:19, 5kpw:19, 5kpx:19, 5l3p:o, 6lkq:N, 7lv0:T, 5lza:o, 5lzb:o, 5lzc:o, 5lzd:o, 5lze:o, 5lzf:o, 7m5d:t, 5mdv:t, 5mdw:t, 5mdy:t, 5mdz:t, 5me0:O, 5me1:O, 5mgp:o, 5my1:O, 7n1p:SO, 7n2c:SO, 7n2u:SO, 7n2v:SO, 7n30:SO, 7n31:SO, 7nar:O, 7nas:O, 7nat:O, 7nau:O, 7nav:O, 7nax:O, 7nbu:O, 5no2:O, 5no3:O, 5no4:O, 5np6:R, 6nqb:O, 7nso:o, 7nsp:o, 7nsq:o, 5nwy:E, 7nwt:t, 7nww:s, 7o19:AO, 7o1a:AO, 7o1c:AO, 5o2r:o, 7o5h:O, 6o7k:u, 6o9j:o, 6o9k:o, 7oe0:O, 7oe1:O, 6ofx:T, 6og7:T, 6ogf:T, 6ogg:T, 6ogi:T, 7oi0:O, 7oif:s, 7oig:s, 7oii:s, 7oiz:O, 7oj0:O, 6om6:t, 6ore:t, 6orl:t, 6osk:t, 6osq:t, 6ost:t, 6ot3:t, 7ot5:s, 7otc:o, 6ouo:t, 8p16:t, 8p17:t, 8p18:t, 7p3k:O, 8peg:O, 8phj:O, 7pjs:o, 7pjt:o, 7pju:o, 7pjv:o, 7pjw:o, 7pjx:o, 7pjy:o, 7pjz:o, 8pkl:O, 8pva:O, 7q4k:AO, 8q4f:O, 6q97:t, 6q98:t, 6q9a:t, 8qbt:w, 7qg8:H, 7qgh:F, 7qgn:H, 7qgr:F, 8qk7:t, 8qoa:O, 8r3v:O2, 8r3v:O1, 8r6c:O, 8r8m:O, 8rcl:O2, 8rcl:O1, 8rcm:O2, 8rcm:O1, 8rcs:O2, 8rcs:O1, 8rct:O2, 8rct:O1, 7s1g:w, 7s1h:w, 7s1i:w, 7s1j:w, 7s1k:w, 7sa4:t, 7ss9:T, 7ssd:T, 7ssl:T, 7ssn:T, 7sso:T, 7ssw:T, 7st2:T, 7st6:T, 7st7:T, 8syl:o, 6szs:o, 8t5d:n, 8t5h:n, 6tbv:S151, 6tc3:S151, 7tos:S15, 4u1u:AO, 4u1u:CO, 4u1v:AO, 4u1v:CO, 4u20:AO, 4u20:CO, 4u24:AO, 4u24:CO, 4u25:AO, 4u25:CO, 4u26:AO, 4u26:CO, 4u27:AO, 4u27:CO, 5u4i:o, 5u9f:O, 5u9g:O, 7ug7:SO, 7uph:B, 8upo:T, 8upr:T, 8uql:T, 8uqm:T, 8uqp:T, 8ur0:T, 8urh:T, 8uri:T, 8urx:T, 8ury:T, 5uyk:O, 5uyl:O, 5uym:O, 5uyn:O, 5uyp:O, 5uyq:O, 5uz4:O, 4v4h:AO, 4v4h:CO, 4v4q:AO, 4v4q:CO, 4v4v:AO, 4v4w:AO, 4v50:AO, 4v50:CO, 4v52:AO, 4v52:CO, 4v53:AO, 4v53:CO, 4v54:AO, 4v54:CO, 4v55:AO, 4v55:CO, 4v56:AO, 4v56:CO, 4v57:AO, 4v57:CO, 4v5b:BO, 4v5b:DO, 4v5h:AO, 4v5y:AO, 4v5y:CO, 4v64:AO, 4v64:CO, 4v65:AH, 4v66:AH, 4v69:AO, 4v6c:AO, 4v6c:CO, 4v6d:AO, 4v6d:CO, 4v6e:AO, 4v6e:CO, 4v6k:BS, 4v6l:AS, 4v6m:AO, 4v6n:BR, 4v6o:AR, 4v6p:AR, 4v6q:AR, 4v6r:AR, 4v6s:BQ, 4v6t:AO, 4v6v:AO, 4v6y:AO, 4v6z:AO, 4v70:AO, 4v71:AO, 4v72:AO, 4v73:AO, 4v74:AO, 4v75:AO, 4v76:AO, 4v77:AO, 4v78:AO, 4v79:AO, 4v7a:AO, 4v7b:AO, 4v7c:AO, 4v7d:BO, 4v7i:BO, 4v7s:AO, 4v7s:CO, 4v7t:AO, 4v7t:CO, 4v7u:AO, 4v7u:CO, 4v7v:AO, 4v7v:CO, 4v85:AO, 4v89:AO, 4v9c:AO, 4v9c:CO, 4v9d:AO, 4v9d:BO, 4v9o:BO, 4v9o:DO, 4v9o:FO, 4v9o:HO, 4v9p:BO, 4v9p:DO, 4v9p:FO, 4v9p:HO, 8vs9:S15, 8vsa:S15, 6vu3:T, 6vwl:n, 6vwm:n, 6vwn:n, 6vyq:T, 6vyr:T, 6vys:T, 6vyt:T, 6vyu:T, 6vyw:T, 6vyx:T, 6vyy:T, 6vyz:T, 6vz2:T, 6vz3:T, 6vz5:T, 6vz7:T, 6vzj:T, 6w6k:O, 6w77:O, 6w7m:O, 6w7n:O, 6w7w:N, 5wdt:o, 6wd0:T, 6wd1:T, 6wd2:T, 6wd3:T, 6wd4:T, 6wd5:T, 6wd6:T, 6wd7:T, 6wd8:T, 6wd9:T, 6wda:T, 6wdb:T, 6wdc:T, 6wdd:T, 6wde:T, 6wdf:T, 6wdg:T, 6wdh:T, 6wdi:T, 6wdj:T, 6wdk:T, 6wdl:T, 6wdm:T, 5we4:o, 5we6:o, 4wf1:AO, 4wf1:CO, 5wf0:o, 5wfk:o, 5wfs:o, 6wnv:T, 6wnw:T, 4woi:AO, 4woi:DO, 4www:QO, 4www:XO, 6x6t:T, 6x7f:T, 6x7k:T, 6x9q:T, 6xdq:T, 6xdr:T, 6xe0:O, 6xgf:T, 6xii:T, 6xij:T, 6xza:O1, 6xzb:O1, 6y69:o, 7y7c:O, 7y7d:O, 7y7e:O, 7y7f:O, 7y7g:O, 7y7h:O, 4ybb:AO, 4ybb:BO, 2ykr:O, 6ysr:o, 6yss:o, 6yst:o, 6ysu:o, 6ztj:AO, 6ztm:AO, 6ztn:AO, 6zto:AO, 6ztp:AO, 7zta:S151, 6zu1:AO
13 5t04:A 458 19 0.1000 0.0197 0.4737 5.0 4grv:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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