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BioLiP
>protein
SVVLPVAKRGEDILKLIAAPVSANELNSNWLYQLADAMHATMLERNGVGIAAPQVYISKRVIIVASPEMNAVVMVNPEIL
EFSSETCLGEEGCLSVPDERGQVERAEMVKVKYLTLQGEAVETIFHGFPARIVQHEVDHLNGILFVER

The query sequence (length=148) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6jes:A 159 157 0.9730 0.9057 0.9172 3.81e-101 6jes:B, 6jf3:A, 6jf3:B, 6jf4:B, 6jf4:A, 6jf5:B, 6jf5:A, 6jf6:C, 6jf6:A, 6jf6:B, 6jf6:D, 6jf7:A, 6jf7:B, 6jf8:A, 6jf8:B, 6jf8:C, 6jf8:D
2 3uwb:A 149 127 0.3784 0.3758 0.4409 1.05e-29 3uwa:A
3 1y6h:A 177 155 0.3649 0.3051 0.3484 1.28e-29 1sv2:A, 1sv2:B, 1szz:A, 1szz:B, 1szz:C, 1szz:D, 1szz:E, 1szz:F, 1szz:G, 1szz:H, 1vev:A, 1vev:B, 1vey:A, 1vey:B, 1vez:A, 1vez:B, 1y6h:B
4 6jfc:B 161 144 0.3851 0.3540 0.3958 2.54e-28 6jfa:A, 6jfc:A, 6jfd:C, 6jfe:B, 6jff:B, 6jfn:B
5 4wxl:C 165 139 0.4054 0.3636 0.4317 3.47e-28 4wxl:A, 4wxl:B, 4wxl:D
6 1bs4:A 168 136 0.3851 0.3393 0.4191 3.21e-26 2ai8:A, 2ai8:B, 2ai8:C, 4al2:B, 4al3:A, 4az4:A, 1bs4:B, 1bs4:C, 1bs5:A, 1bs5:B, 1bs5:C, 1bs6:A, 1bs6:B, 1bs6:C, 1bs8:A, 1bs8:B, 1bs8:C, 1bsj:A, 1bsk:A, 1bsz:A, 1bsz:B, 1bsz:C, 7d6z:g, 1def:A, 2def:A, 1dff:A, 1g27:A, 1g27:B, 1g27:C, 1g2a:A, 1g2a:B, 1g2a:C, 3k6l:A, 3k6l:B, 2kmn:A, 1lru:A, 1lru:B, 1lru:C, 8ofe:A, 8rhr:A, 2w3t:A, 2w3u:A, 1xem:A, 1xen:A, 1xeo:A
7 5kob:A 171 152 0.3784 0.3275 0.3684 1.50e-25 5kob:B, 5kob:C, 5kob:D, 5vcp:A, 5vcp:B, 5vcp:C, 5vcp:D
8 2os1:A 179 144 0.4189 0.3464 0.4306 5.72e-24
9 1ix1:A 169 136 0.3581 0.3136 0.3897 7.29e-24 1ix1:B, 1lry:A, 1n5n:A, 1n5n:B, 1s17:A, 1s17:B
10 6ck7:A 172 136 0.3986 0.3430 0.4338 8.83e-24 6ck7:B, 6ck7:C, 6ck7:D
11 4dr8:A 188 143 0.3581 0.2819 0.3706 1.61e-23 4dr8:B, 4dr8:C, 4dr8:D, 4dr9:A, 4dr9:B, 4dr9:C, 4dr9:D
12 1ws1:A 151 119 0.3514 0.3444 0.4370 1.64e-23
13 6jex:A 172 147 0.3784 0.3256 0.3810 1.89e-23 6jer:A, 6jer:B, 6jet:A, 6jet:B, 6jeu:A, 6jeu:B, 6jev:A, 6jev:B, 6jew:A, 6jew:B, 6jex:B
14 3cmd:B 188 146 0.3784 0.2979 0.3836 2.27e-23 3cmd:A, 3g6n:A, 3g6n:B
15 3fwx:A 165 147 0.3986 0.3576 0.4014 9.73e-23 3fwx:B
16 3cpm:A 184 122 0.3108 0.2500 0.3770 3.78e-22 3m6o:A, 3m6o:B, 3m6p:A, 3m6p:B, 3m6q:A, 3m6r:A, 3m6r:B, 3m6r:C, 3m6r:D, 3o3j:A, 3pn2:A, 3pn3:A, 3pn3:B, 3pn4:A, 3pn5:A, 3pn6:A, 3pn6:B
17 1jym:A 179 123 0.3311 0.2737 0.3984 9.85e-22 1jym:B, 1jym:C, 1jym:D, 1jym:E, 1jym:F, 1jym:G, 1jym:H, 1jym:I, 1jym:J, 1rl4:A, 1rl4:B, 1rqc:A, 1rqc:B, 1rqc:C, 1rqc:D, 1rqc:E, 1rqc:F, 1rqc:G, 1rqc:H, 1rqc:I, 1rqc:J
18 1lqy:A 184 160 0.3986 0.3207 0.3688 1.35e-21
19 5j46:A 169 136 0.3649 0.3195 0.3971 6.52e-21
20 3oca:A 179 128 0.3041 0.2514 0.3516 9.11e-21 3oca:B, 3u04:A
21 2okl:A 185 159 0.3784 0.3027 0.3522 2.58e-20 2okl:B
22 1lm4:A 190 111 0.2973 0.2316 0.3964 3.12e-20 6jfg:A, 6jfo:A, 6jfq:A, 6jfr:A, 6jfs:A, 1lm4:B, 1lmh:A, 1lqw:A, 1lqw:B, 1q1y:A, 3u7k:A, 3u7l:A, 3u7m:A, 3u7n:A
23 6ow7:P 196 121 0.3446 0.2602 0.4215 7.14e-20 2ai7:A, 2aia:A, 2aie:P, 4eox:P, 1lm6:A, 6ow2:P, 6ow7:Q, 3str:P, 3svj:P, 3sw8:P
24 3qu1:A 168 116 0.2905 0.2560 0.3707 3.80e-19 3qu1:B
25 2ew5:A 166 125 0.3108 0.2771 0.3680 5.69e-19 4e9a:A, 4e9b:A, 2ew6:A, 2ew7:A
26 5cy7:A 171 142 0.3446 0.2982 0.3592 4.56e-18 5cp0:A, 5cpd:A, 5cvk:A, 5cvp:A, 5cvq:A, 5cwx:A, 5cwy:A, 5cx0:A, 5cxj:A, 5cy8:A, 6ikt:A, 6iky:A, 6il0:A, 6il2:A, 4nt8:A
27 3g5k:A 183 161 0.3378 0.2732 0.3106 6.25e-18 3g5k:B, 3g5k:C, 3g5k:D, 3g5p:A, 3g5p:B, 3g5p:C, 3g5p:D
28 4je6:A 193 157 0.3514 0.2694 0.3312 1.25e-17 4je6:B, 4je7:A, 4je7:B, 4je8:A, 4je8:B, 1zxz:A, 1zxz:B, 1zy0:A, 1zy0:B, 1zy1:A, 1zy1:B
29 3e3u:A 196 160 0.3784 0.2857 0.3500 1.38e-17
30 5hgw:A 174 152 0.3514 0.2989 0.3421 3.67e-17 5hgw:B, 5i2b:A, 5t8z:A
31 5jex:A 203 120 0.3108 0.2266 0.3833 6.53e-17 5jez:A, 5jf0:A, 5jf1:A, 5jf2:A, 5jf3:A, 5jf4:A, 5jf5:A, 5jf6:A, 5jf7:A, 5jf8:A
32 3l87:A 200 134 0.3514 0.2600 0.3881 1.91e-16
33 2os3:A 205 122 0.3176 0.2293 0.3852 2.44e-16
34 5mtc:A 137 106 0.2365 0.2555 0.3302 1.59e-13 5mtc:B, 5mtd:A, 5mtd:B, 5mte:A, 5mte:B
35 3pxp:A 292 110 0.1824 0.0925 0.2455 1.9 3pxp:B, 3pxp:C
36 5ze9:F 456 41 0.0878 0.0285 0.3171 2.4 7coq:F, 7dqd:E, 7dqd:F, 7dqd:M, 7dqd:N, 8igv:D, 8igv:E, 8igw:D, 8igw:J, 8igw:L, 5knc:F, 3vr3:E, 3vr3:F, 3vr6:E, 3vr6:F, 7vw7:E, 7vw7:F, 5ze9:D, 5ze9:E
37 3jcu:R 232 29 0.0676 0.0431 0.3448 4.7 3jcu:r, 3pl9:A
38 5cvn:B 321 31 0.0743 0.0343 0.3548 5.3 5cvo:B, 5cvo:E, 6jlq:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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