Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
SVKDFPKIKAIRSFIIGGVGSGGDYHNVKGGHWLIDSDISTPASKWEQYKKSRTSWGINVLGSFLVEIEATDGTVGFATG
FGGPPACWLVHQHFERFLIGADPRNTNLLFEQMYRASMFYGRKGLPIAVISVIDLALWDLLGKVRNEPVYRLIGGATKER
LDFYCTGPEPTAAKAMGFWGGKVPLPFCPDDGHEGLRKNVEFLRKHREAVGPDFPIMVDCYMSLNVSYTIELVKACLDLN
INWWEECLSPDDTDGFALIKRAHPTVKFTTGEHEYSRYGFRKLVEGRNLDIIQPDVMWLGGLTELLKVAALAAAYDVPVV
PHASGPYSYHFQISQPNTPFQEYLANSPDGKSVLPVFGDLFIDEPIPTKGYLTTADLDKPGFGLTINPAARAKLIPSDYL
FKVPE

The query sequence (length=405) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3fxg:A 407 405 1.0000 0.9951 1.0000 0.0 3fxg:B, 3fxg:C, 3fxg:D, 3fxg:E, 3fxg:F, 3fxg:G, 3fxg:H
2 3ekg:A 395 388 0.4864 0.4987 0.5077 3.45e-139 3ekg:B
3 3d46:A 405 400 0.4444 0.4444 0.4500 2.64e-120 3box:A, 3box:B, 3cxo:A, 3cxo:B, 3d46:B, 3d46:C, 3d46:D, 3d46:E, 3d46:F, 3d46:G, 3d46:H, 3d47:A, 3d47:B, 3d47:C, 3d47:D, 3d47:E, 3d47:F, 3d47:G, 3d47:H, 2gsh:A, 2gsh:B
4 3sqs:A 386 334 0.2741 0.2876 0.3323 1.46e-56
5 3stp:A 390 332 0.2667 0.2769 0.3253 1.93e-54
6 5olc:C 351 271 0.2346 0.2707 0.3506 9.59e-48 5olc:D, 5olc:F, 5olc:G, 5olc:H
7 4hpn:A 378 349 0.2617 0.2804 0.3037 2.62e-42 4ggb:A
8 2ox4:C 397 355 0.2667 0.2720 0.3042 1.04e-38 2ox4:A, 2ox4:B, 2ox4:D, 2ox4:E, 2ox4:F, 2ox4:G, 2ox4:H
9 4e6m:A 401 365 0.2469 0.2494 0.2740 3.72e-31 4e6m:B, 4e6m:C, 4e6m:D, 4e6m:E, 4e6m:F, 4e6m:G, 4e6m:H, 2gl5:A, 2gl5:B
10 2qq6:B 396 307 0.2247 0.2298 0.2964 6.29e-31 2qq6:A
11 3sjn:A 373 356 0.2321 0.2520 0.2640 2.80e-30 3sjn:B
12 3ck5:A 357 336 0.2296 0.2605 0.2768 5.32e-29 3ck5:B, 3ck5:C, 3ck5:D
13 3mqt:E 378 365 0.2469 0.2646 0.2740 9.86e-29 3mqt:A, 3mqt:D, 3mqt:F, 3mqt:G, 3mqt:H, 3mqt:K, 3mqt:L, 3mqt:U, 3mqt:V, 3mqt:W, 3mqt:X
14 3ozm:A 386 259 0.1901 0.1995 0.2973 1.65e-28 3op2:A, 3op2:B, 3ozm:B, 3ozm:C, 3ozm:D, 3ozm:E, 3ozm:F, 3ozm:G, 3ozm:H, 3ozy:A, 3ozy:B
15 3bjs:B 376 346 0.2123 0.2287 0.2486 1.34e-27 3bjs:A
16 3n4e:A 368 293 0.2025 0.2228 0.2799 6.04e-27 3n4e:B
17 2o56:A 392 312 0.2148 0.2219 0.2788 1.01e-26 2o56:B, 2o56:C, 2o56:D, 2o56:E, 2o56:F, 2o56:G, 2o56:H
18 4h1z:B 388 276 0.2074 0.2165 0.3043 8.97e-26 4h1z:A, 4h1z:C, 4h1z:D, 4h1z:E, 4h1z:F, 4h1z:G, 4h1z:H
19 5xd8:B 367 236 0.1728 0.1907 0.2966 1.09e-25 5xd7:A, 5xd8:A, 5xd9:A
20 4h83:F 368 310 0.2049 0.2255 0.2677 1.20e-25 4h83:A, 3no1:A, 3no1:B, 3no1:C, 3no1:D, 3no1:E, 3no1:F
21 2pp1:A 395 345 0.2173 0.2228 0.2551 1.44e-25 2pp1:B, 2pp1:C, 2pp1:D, 2pp1:E, 2pp1:F, 2pp3:A, 2pp3:B, 2pp3:C
22 3rcy:F 397 367 0.2617 0.2670 0.2888 1.76e-25 3rcy:A, 3rcy:C, 3rcy:B, 3rcy:D, 3rcy:E, 3rcy:G, 3rcy:H
23 4h19:A 372 318 0.2173 0.2366 0.2767 4.73e-25 4h19:B, 4h19:C, 4h19:D, 4h19:F, 4h19:E, 4h19:G, 4h19:H, 4h19:I, 4h19:K, 4h19:L, 4h19:M, 4h19:N, 4h19:P, 4h19:J, 4h19:O
24 3rra:B 379 271 0.2049 0.2190 0.3063 1.99e-24 3rra:A
25 3nzg:D 380 317 0.2049 0.2184 0.2618 6.08e-24 3nzg:A, 3nzg:B, 3nzg:C
26 4gme:A 403 352 0.2321 0.2333 0.2670 1.10e-22 4gme:C, 3vcn:A, 3vcn:C
27 3v3w:A 397 337 0.2123 0.2166 0.2552 2.30e-22 3v4b:A
28 3gy1:B 388 346 0.2272 0.2371 0.2659 2.33e-21 3gy1:A, 3s47:A, 3s47:B
29 3thu:A 405 339 0.2272 0.2272 0.2714 2.88e-21 3thu:B, 3thu:C
30 4e4f:B 381 330 0.2123 0.2257 0.2606 5.09e-21 4e4f:C, 4il2:A, 4il2:C, 4il2:D
31 4fi4:A 407 337 0.2198 0.2187 0.2641 6.12e-21 4fi4:B, 4fi4:C
32 4gir:B 411 374 0.2247 0.2214 0.2433 2.20e-20 4ggh:A, 4ggh:B, 4ggh:C, 4ggh:D, 4gir:A, 4gir:C, 4gir:D, 4gis:A, 4gis:B
33 3tte:A 361 294 0.1951 0.2188 0.2687 4.81e-20 3toy:A, 3toy:B, 3toy:C, 3toy:D, 3tte:B
34 4kws:A 397 302 0.1901 0.1940 0.2550 3.30e-19 4k2s:A, 4k2s:B, 4k2s:C, 4k2s:D, 4k2s:E, 4k2s:F, 4k2s:G, 4k2s:H, 4kpl:A, 4kpl:B, 4kpl:C, 4kpl:D, 4kpl:E, 4kpl:F, 4kpl:G, 4kpl:H, 4kt2:A, 4kt2:B, 4kt2:C, 4kt2:D, 4kt2:E, 4kt2:F, 4kt2:G, 4kt2:H, 4kws:B, 4kws:C, 4kws:D, 4kws:E, 4kws:F, 4kws:G, 4kws:H, 3ow1:A, 3ow1:B, 3ow1:C, 3ow1:D, 3ow1:E, 3ow1:F, 3ow1:G, 3ow1:H, 3p93:A, 3p93:B, 3p93:C, 3p93:D, 3p93:E, 3p93:F, 3p93:G, 3p93:H, 3pk7:A, 3pk7:B, 3pk7:C, 3pk7:D, 3pk7:E, 3pk7:F, 3pk7:G, 3pk7:H, 3qke:A, 3qke:B, 3qke:C, 3qke:D, 3qke:E, 3qke:F, 3qke:G, 3qke:H, 3rgt:A, 3rgt:B, 3rgt:C, 3rgt:D
35 1yey:C 435 130 0.1136 0.1057 0.3538 7.82e-19 2hne:A, 2hne:B, 2hne:C, 2hne:D, 2hxt:A, 2hxu:A, 1yey:A, 1yey:B, 1yey:D
36 3ugv:F 364 309 0.1827 0.2033 0.2395 8.74e-19 3ugv:A, 3ugv:B, 3ugv:C, 3ugv:D, 3ugv:E, 3ugv:G, 3ugv:H
37 2qjj:A 402 352 0.1975 0.1990 0.2273 1.29e-18 4k1w:A, 4k1w:B, 4k1w:C, 4k1w:D, 4k8g:A, 2qjj:B, 2qjj:C, 2qjj:D, 2qjm:A, 2qjm:B, 2qjm:C, 2qjm:D, 2qjn:A, 2qjn:B, 2qjn:C, 2qjn:D
38 3tji:A 399 300 0.1827 0.1855 0.2467 2.19e-18 3tji:B, 3tji:C, 3tji:D
39 4il2:B 404 349 0.2099 0.2104 0.2436 3.23e-18 4e4f:A, 4e4f:D
40 3t8q:B 369 275 0.1901 0.2087 0.2800 3.54e-18 3t8q:A
41 2qgy:A 376 388 0.2296 0.2473 0.2397 3.55e-18 2qgy:B
42 4hnl:A 401 366 0.2198 0.2219 0.2432 6.24e-18
43 3r25:B 399 366 0.2123 0.2155 0.2350 9.53e-18 3r25:A, 3r25:C, 3r25:D, 3r25:E, 3r25:F, 3r25:G, 3r25:H, 3sbf:A, 3sbf:B, 3sbf:C, 3sbf:D
44 7mqx:E 358 292 0.1901 0.2151 0.2637 9.56e-18 1dtn:A, 4fp1:A, 4fp1:B, 4hnc:A, 4hnc:B, 4m6u:A, 4m6u:B, 1mdl:A, 1mdr:A, 1mns:A, 2mnr:A, 7mqx:A, 7mqx:B, 7mqx:C, 7mqx:D, 7mqx:F, 7mqx:G, 7mqx:H, 1mra:A, 3uxk:A, 3uxk:B, 3uxk:C, 3uxk:D, 3uxl:A, 3uxl:B, 3uxl:C, 3uxl:D, 6vim:A, 6vim:B, 6vim:C, 6vim:D, 6vim:E, 6vim:F, 6vim:G, 6vim:H, 4x2p:A
45 3cb3:A 373 346 0.2222 0.2413 0.2601 1.19e-17 3cb3:B, 3cb3:C, 3cb3:D, 2og9:A, 2og9:B
46 3u4f:A 371 348 0.2049 0.2237 0.2385 2.66e-17 3u4f:B, 3u4f:C, 3u4f:D
47 4ihc:B 395 353 0.2272 0.2329 0.2606 3.31e-17 4ihc:C, 4ihc:D, 4ihc:E, 4ihc:F, 4ihc:H
48 3tcs:B 367 363 0.2025 0.2234 0.2259 1.35e-16 3tcs:A
49 4e5t:A 392 249 0.1679 0.1735 0.2731 1.99e-16 4e5t:B, 4e5t:C, 4e5t:D, 4e5t:E, 4e5t:F, 4e5t:G, 4e5t:H
50 4ip4:A 421 171 0.1383 0.1330 0.3275 1.39e-15 4ip4:B, 4ip5:A, 4ip5:B
51 4dn1:A 389 275 0.1654 0.1722 0.2436 3.76e-15 4dn1:B
52 2p88:A 369 268 0.1753 0.1924 0.2649 7.22e-15 2p88:B, 2p88:C, 2p88:D, 2p88:E, 2p88:F, 2p88:G, 2p88:H, 2p8b:A, 2p8c:A
53 4hcd:A 384 356 0.2025 0.2135 0.2303 1.01e-14 4hch:A, 4hch:B, 4hcl:A, 4hcl:B, 4mmw:A, 4mmw:B, 1rvk:A
54 3twb:C 417 379 0.2346 0.2278 0.2507 3.27e-14 4ihc:A, 4ihc:G, 3twa:A, 3twa:B, 3twa:C, 3twa:D, 3twa:E, 3twb:A, 3twb:B, 3twb:D, 3twb:E
55 3t6c:A 415 361 0.2173 0.2120 0.2438 2.87e-13 3t6c:B
56 4a35:A 441 132 0.0988 0.0907 0.3030 7.82e-13
57 3sn0:A 401 306 0.1852 0.1870 0.2451 7.93e-12 3go2:A, 3sn1:A, 3sn4:A
58 3jva:B 354 263 0.1630 0.1864 0.2510 1.15e-11 3jva:A, 3jva:C, 3jva:D, 3jva:E, 3jva:F, 3jva:G, 3jva:H, 3jw7:A, 3jw7:B, 3jw7:C, 3jw7:D, 3jw7:E, 3jw7:F, 3jw7:G, 3jw7:H, 3jzu:A, 3jzu:B, 3jzu:C, 3jzu:D, 3jzu:E, 3jzu:F, 3jzu:G, 3jzu:H, 3k1g:A, 3k1g:B, 3k1g:C, 3k1g:D, 3k1g:E, 3k1g:F, 3k1g:G, 3k1g:H, 3kum:A, 3kum:B, 3kum:C, 3kum:D, 3kum:E, 3kum:F, 3kum:G, 3kum:H
59 4mgg:A 369 363 0.2198 0.2412 0.2452 2.47e-10 4mgg:B, 4mgg:C, 4mgg:D, 4mgg:E, 4mgg:F, 4mgg:G, 4mgg:H
60 3n4f:A 390 297 0.1802 0.1872 0.2458 3.53e-09 3n4f:B, 3n4f:C, 3n4f:D, 3ops:A, 3ops:B, 3ops:C, 3ops:D, 3p3b:A, 3p3b:B, 3qpe:A, 3qpe:B, 3qpe:C, 3qpe:D, 3v5c:A, 3v5c:B, 3v5c:C, 3v5c:D, 3v5f:A, 3vcc:A, 3vcc:B
61 2gge:D 376 208 0.1259 0.1356 0.2452 1.12e-07 2gge:A, 2gge:B, 2gge:C, 2gge:E, 2gge:F, 2gge:G, 2gge:H
62 2dw6:A 388 233 0.1432 0.1495 0.2489 6.97e-07 2dw6:B, 2dw6:C, 2dw6:D, 2dw7:A, 2dw7:B, 2dw7:C, 2dw7:D, 2dw7:E, 2dw7:F, 2dw7:G, 2dw7:H, 2dw7:I, 2dw7:J, 2dw7:K, 2dw7:L, 2dw7:M, 2dw7:N, 2dw7:O, 2dw7:P, 1tzz:A, 1tzz:B
63 4it1:D 427 299 0.1580 0.1499 0.2140 2.61e-06 4it1:A
64 2rdx:A 369 266 0.1457 0.1599 0.2218 5.69e-06 2rdx:B, 2rdx:C, 2rdx:D, 2rdx:E, 2rdx:F, 2rdx:G, 2rdx:H
65 3q45:A 368 268 0.1457 0.1603 0.2201 1.14e-05 3q45:B, 3q45:C, 3q45:D, 3q45:E, 3q45:F, 3q45:G, 3q45:H, 3q45:I, 3q4d:A, 3q4d:B, 3q4d:C, 3q4d:D, 3q4d:E, 3q4d:F, 3q4d:G, 3q4d:H, 3q4d:I
66 2ps2:A 361 240 0.1580 0.1773 0.2667 2.63e-05 2ps2:B, 2ps2:C, 2ps2:D
67 3dg6:A 366 199 0.1160 0.1284 0.2362 5.03e-04 3dg3:A, 3dg7:A, 3dg7:B, 3dg7:C, 3dg7:D
68 4kem:A 390 213 0.1210 0.1256 0.2300 8.94e-04 4kem:B
69 3i6e:A 356 197 0.1259 0.1433 0.2589 0.002 3i6e:B, 3i6e:C, 3i6e:D, 3i6e:E, 3i6e:F, 3i6e:G, 3i6e:H
70 1jpm:A 359 197 0.1037 0.1170 0.2132 0.002 1jpm:B, 1jpm:C, 1jpm:D, 1tkk:A, 1tkk:B, 1tkk:C, 1tkk:D, 1tkk:E, 1tkk:F, 1tkk:G, 1tkk:H
71 3my9:A 357 265 0.1333 0.1513 0.2038 0.002
72 3i4k:A 370 271 0.1407 0.1541 0.2103 0.002 3i4k:B, 3i4k:C, 3i4k:D, 3i4k:E, 3i4k:F, 3i4k:G, 3i4k:H
73 6qex:A 1182 77 0.0667 0.0228 0.3506 0.007 7a65:A, 7a69:A, 7a6c:A, 7a6e:A, 7a6f:A, 6c0v:A, 7o9w:A
74 3i6t:B 364 193 0.1160 0.1291 0.2435 0.009 3i6t:A, 3i6t:C, 3i6t:D
75 3r11:B 364 270 0.1210 0.1346 0.1815 0.018 3r0u:A, 3r10:A, 3r11:A, 3r1z:A, 3r1z:B
76 3fcp:A 356 199 0.1259 0.1433 0.2563 0.035 3fcp:B, 3fcp:C, 3fcp:D, 3fcp:E, 3fcp:F, 3fcp:G, 3fcp:H
77 3fvd:B 367 284 0.1432 0.1580 0.2042 0.071 3fvd:A
78 2pmq:B 374 199 0.1160 0.1257 0.2362 0.083 4h2h:A, 4h2h:B, 4h2h:C, 4h2h:D, 4h2h:E, 4h2h:F, 4h2h:G, 4h2h:H, 2pmq:A
79 6lcs:A 168 69 0.0444 0.1071 0.2609 0.26
80 3es7:A 387 354 0.1951 0.2041 0.2232 0.42 3es7:B, 3es8:A, 3es8:B, 3es8:C, 3es8:D, 3es8:E, 3es8:F, 3es8:G, 3es8:H, 3fyy:A, 3fyy:B, 3hpf:A, 3hpf:B, 2oqy:A, 2oqy:B, 2oqy:C, 2oqy:D, 2oqy:E, 2oqy:F, 2oqy:G, 2oqy:H
81 6q8y:z 874 127 0.0889 0.0412 0.2835 0.55
82 4m1m:A 1188 69 0.0543 0.0185 0.3188 0.61 8avy:A, 6fn1:A, 3g60:A, 3g60:B, 3g61:A, 3g61:B, 5koy:A, 5koy:B, 4m1m:B, 4m2s:A, 4m2s:B, 4m2t:A, 4m2t:B, 7otg:A, 8pee:A, 6q81:A, 4q9i:A, 4q9j:A, 4q9k:A, 4q9l:A, 6qee:A, 6ujn:A, 6ujp:A, 6ujr:A, 6ujs:A, 6ujt:A, 6ujw:A, 4xwk:A, 7zk4:A, 7zk5:A, 7zk6:A, 7zk7:A, 7zk8:A, 7zk9:A, 7zka:A, 7zkb:A
83 7niw:A 1140 66 0.0519 0.0184 0.3182 0.63 7niu:A, 7niv:A, 6s7p:A
84 4izg:A 369 71 0.0593 0.0650 0.3380 0.77 4e8g:A, 4e8g:B, 4izg:B, 4j1o:A, 4j1o:B
85 4m0x:A 369 111 0.0691 0.0759 0.2523 0.86 4m0x:B
86 4kl8:L 489 55 0.0420 0.0348 0.3091 2.2 1cc1:L, 4kl8:M, 4kn9:L, 4kn9:M, 4ko1:L, 4ko1:M, 4ko2:L, 4ko2:M, 4ko3:L, 4ko3:M, 4ko4:L, 4ko4:M
87 8j74:A 515 32 0.0321 0.0252 0.4062 2.3 8j74:B, 8j75:A, 8j77:A
88 6h61:A 660 72 0.0593 0.0364 0.3333 2.6 6g1s:A, 6g1x:A, 7nga:A
89 8pm6:A 872 38 0.0321 0.0149 0.3421 2.8
90 8cqs:B 194 76 0.0370 0.0773 0.1974 3.0 8cqs:A
91 7b2i:C 389 79 0.0568 0.0591 0.2911 3.1 7ov9:C, 7ovo:C, 7ovs:C, 7owz:C
92 6ak7:A 257 42 0.0370 0.0584 0.3571 3.4 4da1:A, 2iq1:A
93 8pmj:A 1133 38 0.0321 0.0115 0.3421 3.5 8pmd:A
94 5xcu:A 171 51 0.0370 0.0877 0.2941 3.6 8iqr:H, 8iqr:h, 5xcs:A, 5xcu:D
95 1wuf:A 371 199 0.1012 0.1105 0.2060 3.6 1wuf:B
96 7dv5:U 1189 38 0.0321 0.0109 0.3421 3.7 7e1a:U
97 8adl:C 782 58 0.0593 0.0307 0.4138 3.8 8adl:Q
98 5zw3:B 193 68 0.0543 0.1140 0.3235 6.3
99 3ijq:A 337 267 0.1506 0.1810 0.2285 7.0 3iji:A, 3iji:B, 3ijl:A, 3ijl:B, 3ijq:B
100 3rit:A 354 230 0.1259 0.1441 0.2217 7.2 3rit:B, 3rit:C, 3rit:D, 3rit:E, 3ro6:B, 3ro6:A, 3ro6:C, 3ro6:D, 3ro6:E, 3ro6:F
101 2pw6:A 244 50 0.0395 0.0656 0.3200 7.4
102 5wqk:A 293 70 0.0469 0.0648 0.2714 7.4 5wqj:A, 5wqj:B, 5wqk:B

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218