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BioLiP
>protein
STSVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHLFQLDISVKQGRDKVREMFKKNAHITDPRVVDLLVIKGKMELEET
IKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGHDP

The query sequence (length=115) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8q0f:W 116 115 1.0000 0.9914 1.0000 3.12e-83 7ak5:W, 7ak6:W, 7b93:W, 8c2s:W, 8ca3:W, 8ca5:W, 6g2j:W, 6g72:W, 5gup:Q, 8iao:W, 8iap:W, 8ib4:W, 8ib5:W, 8ib9:W, 8iba:W, 8ibd:W, 8ibe:W, 8ic2:W, 8ic3:W, 5lnk:g, 8olt:W, 8om1:W, 7psa:W, 8pw5:W1, 8pw6:W1, 8pw7:W1, 8q0a:W, 8q0j:W, 8q0m:W, 8q0o:W, 8q0q:W, 8q1p:W, 8q1u:W, 8q1y:W, 8q25:W, 8q45:W, 8q46:W, 8q47:W, 8q48:W, 8q49:W, 8q4a:W, 6q9d:A6, 6qa9:A6, 6qbx:A6, 6qc2:A6, 6qc3:A6, 6qc4:A6, 6qc5:A6, 6qc6:A6, 6qc7:A6, 6qc8:A6, 6qc9:A6, 6qca:A6, 6qcf:A6, 7qsd:W, 7qsk:W, 7qsl:W, 7qsm:W, 7qsn:W, 7qso:W, 7r41:W, 7r42:W, 7r43:W, 7r44:W, 7r45:W, 7r46:W, 7r47:W, 7r48:W, 7r4c:W, 7r4d:W, 7r4f:W, 7r4g:W, 8rgp:W, 8rgq:W, 8rgr:W, 8rgt:W, 8ud1:1W, 8ueo:1W, 8uep:1W, 8ueq:1W, 8uer:1W, 8ues:1W, 8uet:1W, 8ueu:1W, 8uev:1W, 8uew:1W, 8uex:1W, 8uey:1W, 8uez:1W, 8ugh:1W, 8ugi:1W, 8ugj:1W, 8ugn:1W, 8ugn:5W, 8ugr:1W, 8ugr:5W, 7v2c:E, 7v2d:E, 7v2e:E, 7v2f:E, 7v2h:E, 7v2k:E, 7v2r:E, 7v30:E, 7v31:E, 7v32:E, 7v33:E, 7v3m:E, 7vb7:E, 7vbn:E, 7vbz:E, 7vwj:E, 7vxp:E, 7vxu:E, 7vy8:E, 7vya:E, 7vyf:E, 7vyh:E, 7vyn:E, 7vz1:E, 7vzv:E, 7vzw:E, 7w00:E, 7w0h:E, 7w0r:E, 7w0y:E, 7w1o:E, 7w1p:E, 7w1t:E, 7w1u:E, 7w1v:E, 7w1z:E, 7w20:E, 7w2k:E, 7w2l:E, 7w2r:E, 7w2u:E, 7w2y:E, 7w31:E, 7w32:E, 7w35:E, 7w4c:E, 7w4d:E, 7w4e:E, 7w4f:E, 7w4g:E, 7w4j:E, 7w4k:E, 7w4l:E, 7w4m:E, 7w4n:E, 7w4q:E, 5xtb:E, 5xtd:E, 5xth:E, 5xti:E, 5xti:BE, 7zd6:g, 7zdh:g, 7zdj:g, 7zdm:g, 7zdp:g, 7zeb:g, 6zk9:g, 6zkc:g, 6zkd:g, 6zke:g, 6zkf:g, 6zkg:g, 6zkh:g, 6zki:g, 6zkj:g, 6zkk:g, 6zkl:g, 6zkm:g, 6zkn:g, 6zko:g, 6zkp:g, 6zkq:g, 6zkr:g, 6zks:g, 6zkt:g, 6zku:g, 6zkv:g, 6zr2:W, 6ztq:W
2 8esz:A6 115 110 0.4783 0.4783 0.5000 3.59e-39 8b9z:W, 8ba0:W, 8esw:A6
3 7aqr:W 112 110 0.3304 0.3393 0.3455 1.66e-17 7ar7:W, 7ar8:W, 7arb:W, 8bee:W, 8bpx:W, 8bq5:W, 8bq6:W
4 7zm7:P 122 110 0.3043 0.2869 0.3182 1.81e-17 7zmb:P, 7zmg:P
5 7b0n:W 123 106 0.2783 0.2602 0.3019 2.29e-14 6gcs:P, 7o6y:P, 7o71:P, 6rfq:P, 6rfr:P, 6rfs:P, 6y79:P, 6yj4:W
6 8e73:A6 99 92 0.2522 0.2929 0.3152 3.80e-11
7 7arc:W 127 77 0.2435 0.2205 0.3636 3.18e-09 7ard:W
8 8e73:B9 111 74 0.1913 0.1982 0.2973 0.051
9 8iuf:A6 423 64 0.1391 0.0378 0.2500 0.18 8j9h:A6, 8j9i:A6, 8j9j:A6
10 8u4o:R 295 39 0.1130 0.0441 0.3333 0.59 8u4n:R, 8u4p:R, 8u4q:R, 8u4r:R, 8u4s:R, 8u4s:G, 8u4s:C, 8u4t:R, 8u4t:I, 8u4t:Q, 8u4t:AA
11 7zm7:R 98 36 0.1130 0.1327 0.3611 0.70 7zm8:R, 7zmb:R, 7zme:R, 7zmg:R, 7zmh:R
12 8hkx:AS5P 204 45 0.1217 0.0686 0.3111 0.94 8hky:AS5P, 8hkz:AS5P, 8hl1:AS5P, 8hl2:AS5P, 8hl3:AS5P, 8hl4:AS5P, 8hl5:AS5P, 8wkp:AS5P, 8wq2:AS5P, 8wq4:AS5P
13 6uxe:B 85 81 0.1739 0.2353 0.2469 1.9 6nzu:B, 6nzu:F, 6odd:B, 8pk8:B, 8pk9:B, 8pka:B, 7rtk:B, 8tvt:B, 5usr:F, 5usr:H, 5usr:B, 5usr:D, 6w1d:B, 5wgb:B, 6wi2:B, 6wih:B, 5wkp:B, 5wkp:F, 5wlw:B, 5wlw:F
14 8gsm:G 439 48 0.1304 0.0342 0.3125 2.0 8gsm:I
15 1uli:C 425 21 0.0870 0.0235 0.4762 3.0 1uli:A, 1uli:E, 1ulj:A, 1ulj:C, 1ulj:E
16 6gtd:A 1269 54 0.1739 0.0158 0.3704 4.6 6i1l:D, 5nfv:A, 5ng6:A, 5ng6:C, 5ng6:E, 5ng6:G
17 5mga:A 1182 54 0.1739 0.0169 0.3704 4.8
18 6gtg:A 1298 54 0.1739 0.0154 0.3704 5.1 6gtc:A, 6gte:A, 6gtf:A, 6i1k:A, 6i1l:A
19 6sw9:F 229 34 0.0957 0.0480 0.3235 5.7 5jb3:F, 5jbh:F, 6skf:Ag, 6skg:Ag, 6swc:F, 6swd:F, 6th6:Ag, 4v4n:BF, 4v6u:AF, 7zag:F, 7zah:F, 7zai:F, 7zhg:F
20 6zu5:SC0 221 54 0.1652 0.0860 0.3519 5.7
21 7ykk:E 735 34 0.0783 0.0122 0.2647 7.5 7nku:A, 7nku:F, 7nku:B, 7nku:C, 7nku:D, 7nku:E, 7wbb:A, 7wbb:B, 7wbb:D, 7wbb:E, 7wbb:C, 7wd3:A, 7wd3:B, 7wd3:C, 7wd3:D, 7wd3:E, 7wd3:F, 7ykk:D, 7ykk:F, 7ykk:A, 7ykk:B, 7ykk:C, 7ykl:F, 7ykl:A, 7ykl:B, 7ykl:C, 7ykl:D, 7ykl:E, 7ykt:F, 7ykt:A, 7ykt:B, 7ykt:C, 7ykt:D, 7ykt:E, 7ykz:D, 7ykz:C, 7ykz:F, 7ykz:B, 7ykz:E, 7ykz:A, 7z11:A, 7z11:B, 7z11:C, 7z11:D, 7z11:F, 7z11:E, 7z34:w, 7z34:m, 7z34:n, 7z34:t, 7z34:Aa, 7z34:x
22 3oe6:A 418 28 0.0957 0.0263 0.3929 7.6
23 3odu:A 466 28 0.0957 0.0236 0.3929 7.7 3odu:B, 3oe0:A, 3oe8:A, 3oe8:B, 3oe8:C, 3oe9:A, 3oe9:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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