BioLiP

>protein
STGVELYLDLLKRTVSNFIYQDATHVAGLITQAAFVEEARESGEDYPTVAHTAIGMKRLNNLQHCVESALRDGVPGDVLE
TGVWRGGACIFARGILKAYDVRDRTVWVADSFQGFPKITDDDHPMDAEMNLHQYNAAVDLPTSLATVQRNFSRYGLLDDQ
VRFLPGWFKDTMPTAPFERLAVLRMDGDSYGATMDVLTHAYPRLSPGGFAIIDDYCIPACREAVHEYRDRHGISDEIVEI
DRQGVYWRRS

The query sequence (length=250) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	4x7u:A	252	250	0.9880	0.9802	0.9880	0.0	4x7u:B, 4x7v:A, 4x7v:B, 4x7w:A, 4x7w:B, 4x7x:A, 4x7x:B, 4x7y:B, 4x7y:A, 4x7z:A, 4x7z:B, 4x81:A, 4x81:B, 4xvy:A, 4xvy:B
2	4xvz:C	203	250	0.7760	0.9557	0.7760	1.15e-133	4xvz:A, 4xvz:B, 4xvz:D
3	2wk1:A	242	246	0.5400	0.5579	0.5488	5.12e-97
4	4ce0:A	213	245	0.5400	0.6338	0.5510	1.09e-91	4cdz:A
5	5i10:A	192	245	0.4960	0.6458	0.5061	1.36e-80
6	3tos:B	257	155	0.1600	0.1556	0.2581	0.15	4gf5:A, 4gf5:C, 4gf5:E, 4gf5:F, 4gf5:H, 4gf5:B, 4gf5:D, 4gf5:G, 4gf5:I, 4gf5:J, 4gf5:K, 4gf5:L, 4gf5:M, 4gf5:N, 4gf5:O, 4gf5:P, 4gf5:Q, 4gf5:R, 4gf5:S, 4gf5:T, 3tos:A, 3tos:C, 3tos:D, 3tos:E, 3tos:F, 3tos:G, 3tos:H, 3tos:I, 3tos:J
7	3ubl:A	212	52	0.0640	0.0755	0.3077	0.34	3ubl:B
8	5ncc:A	578	92	0.1040	0.0450	0.2826	0.66	7av4:AAA, 5ncc:B, 5ncc:C, 5ncc:D, 5ncc:E, 5ncc:F, 7r33:A, 7r33:B, 7r34:A, 7r34:B, 7r35:A, 7r35:B, 7r36:A, 7r36:B, 6yru:AAA, 6yrv:AAA, 6yrx:AAA, 6yrz:AAA, 6ys1:AAA, 6ys2:AAA, 6zh7:A, 6zh7:B
9	2h5n:A	132	24	0.0440	0.0833	0.4583	1.0	2h5n:B, 2h5n:C
10	7etj:M	468	75	0.0760	0.0406	0.2533	2.9
11	8ofi:A	452	77	0.0960	0.0531	0.3117	3.0
12	6gyo:A	501	77	0.0960	0.0479	0.3117	3.0	3etq:A, 3etq:B, 6gyo:B, 6gyo:C, 6gyo:D, 4hbn:A, 4kl1:A, 4kl1:B, 4kl1:C, 4kl1:D, 7np4:A, 7np4:B, 7np4:C, 7np4:D, 4nvp:A, 3otf:A, 3u11:A, 3u11:B
13	5jon:A	509	77	0.0960	0.0472	0.3117	4.8	5jon:B

[Back]