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BioLiP
>protein
STASIAVEAENFNAVGGTFSDGQAQPVSVYTVNGNTAINYVNQGDYADYTIAVAQAGNYTISYQAGSGVTGGSIEFLVNE
NGSWASKTVTAVPNQGWDNFQPLNGGSVYLSAGTHQVRLHGAGSNNWQWNLDKFTLSN

The query sequence (length=138) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2cdo:A 138 138 0.9855 0.9855 0.9855 2.30e-96 2cdo:D, 2cdo:C, 2cdo:B, 2cdp:A, 2cdp:D, 2cdp:B, 2cdp:C
2 5fui:A 124 138 0.3116 0.3468 0.3116 8.11e-05
3 1uyy:A 131 130 0.2681 0.2824 0.2846 0.001 1uy0:A, 1uy0:B, 1uyx:A, 1uyx:B, 1uyy:B, 1uyz:A, 1uyz:B, 1uz0:A
4 6tu9:A 267 80 0.1594 0.0824 0.2750 0.010 6tu9:B
5 1w9t:A 134 90 0.1957 0.2015 0.3000 0.34 1w9t:B, 1w9w:A
6 7ehg:E 136 99 0.1884 0.1912 0.2626 0.58 7ehg:A, 7ehg:B, 7ehg:C, 7ehg:D, 7ehg:F, 7ehg:G, 7ehg:H
7 5x7g:A 700 108 0.2029 0.0400 0.2593 0.88 5x7h:A
8 5g56:A 707 149 0.2391 0.0467 0.2215 1.2 5la0:A, 5la1:A, 5la2:A, 5la2:B, 2y8k:A
9 8v8m:A 389 35 0.0870 0.0308 0.3429 1.3 8v8m:C
10 5ou9:A 179 72 0.1377 0.1061 0.2639 1.4 5ou8:B, 5ou8:A, 5ou9:B
11 7ror:B 362 46 0.0870 0.0331 0.2609 1.9 7ror:A, 7ros:A, 7ros:B, 7rot:A, 7rot:B, 3vgj:A, 3vgj:B
12 2v4v:A 129 133 0.2391 0.2558 0.2481 2.6
13 2q2q:D 255 56 0.1304 0.0706 0.3214 3.1 2q2q:C, 2q2q:E, 2q2q:F, 2q2q:G, 2q2q:H, 2q2v:B, 2q2v:C, 2q2v:D
14 1x1t:A 236 38 0.0870 0.0508 0.3158 3.3 2ztu:A
15 1wmb:A 260 38 0.0870 0.0462 0.3158 3.5 1wmb:B, 2ztl:A, 2ztl:B, 2ztl:C, 2ztl:D, 2ztm:A, 2ztm:C, 2ztm:D, 2ztu:C, 2ztu:D, 2ztv:A, 2ztv:B, 2ztv:C, 2ztv:D
16 2wz8:A 135 43 0.0870 0.0889 0.2791 3.8
17 8c5w:A 634 33 0.1014 0.0221 0.4242 4.9 8c5o:A
18 3sy9:B 372 14 0.0725 0.0269 0.7143 6.1 3sy9:A, 3sy9:C, 3sy9:D
19 3fks:P 235 55 0.1232 0.0723 0.3091 6.9 7md2:G, 7md3:G
20 8xkf:C 377 27 0.0870 0.0318 0.4444 7.5 8xhu:A, 8xhu:B, 8xhu:C, 8xkf:A, 8xkf:B, 8xkf:D, 8xkf:F, 8xkf:E
21 6rqf:I 215 30 0.1014 0.0651 0.4667 8.1 7qrm:I, 7qrm:A, 6rqf:A, 7zyv:I, 7zyv:A
22 2wjs:A 519 69 0.1232 0.0328 0.2464 8.7
23 2ber:A 601 39 0.0942 0.0216 0.3333 9.0 2bzd:A, 2bzd:B, 2bzd:C, 1eus:A, 1euu:A, 1w8n:A, 1w8o:A, 1wcq:A, 1wcq:B, 1wcq:C
24 6op5:A 383 35 0.0870 0.0313 0.3429 9.6 6op5:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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