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BioLiP
>protein
SSALLRAAYAYDRLRAHPPEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKI
AGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEGWDQAEASPEWTLQERWRAFAA
EEGFPVERGLHAKRLKEVEEALRRLGLKPRTREVARWREERTPREALEALSERLYSFTQGLPEPVHARVMERLWAWAEAE
LGDLDRPFPVEKRFLLRVSRL

The query sequence (length=261) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2yqz:A 261 261 1.0000 1.0000 1.0000 0.0 2yqz:B
2 2avn:A 247 101 0.1379 0.1457 0.3564 3.64e-07 2avn:B
3 1wzn:A 244 145 0.1494 0.1598 0.2690 8.67e-07 1wzn:B, 1wzn:C
4 6uv6:C 264 97 0.1264 0.1250 0.3402 3.11e-06 6uv6:A, 6uv6:B
5 2gs9:A 211 109 0.1494 0.1848 0.3578 3.72e-06 2gs9:B
6 2glu:A 234 98 0.1264 0.1410 0.3367 1.22e-05 2glu:B
7 6uak:A 297 96 0.1034 0.0909 0.2812 3.46e-05
8 7wzf:A 243 112 0.1456 0.1564 0.3393 7.71e-05
9 5gm2:B 282 106 0.1533 0.1418 0.3774 9.90e-05 5gm1:A, 5gm1:B, 5gm1:C, 5gm1:D, 5gm1:E, 5gm1:F, 5gm1:G, 5gm1:H, 5gm1:I, 5gm1:J, 5gm1:K, 5gm1:L, 5gm1:M, 5gm1:N, 5gm1:O, 5gm1:P, 5gm1:Q, 5gm1:R, 5gm2:A, 5gm2:C, 5gm2:D, 5gm2:E, 5gm2:F, 5gm2:G, 5gm2:H, 5gm2:I, 5gm2:J, 5gm2:L, 5gm2:M, 5gm2:N, 5gm2:O, 5gm2:P, 5gm2:Q, 5gm2:R
10 5gm2:K 267 104 0.1494 0.1461 0.3750 1.80e-04
11 4ine:A 431 190 0.1877 0.1137 0.2579 1.99e-04 4ine:B
12 3bus:A 251 97 0.1188 0.1235 0.3196 2.26e-04 3bus:B
13 7wzg:B 243 108 0.1341 0.1440 0.3241 3.85e-04 7wzg:A, 7wzg:C, 7wzg:D, 7wzg:E, 7wzg:F
14 3i9f:B 169 101 0.0920 0.1420 0.2376 5.22e-04 3i9f:A
15 3g2p:A 251 120 0.1226 0.1275 0.2667 0.001 3g2o:A, 3g2o:B, 3g2p:B, 3g2q:A, 3g2q:B
16 3dh0:B 190 125 0.1264 0.1737 0.2640 0.001 3dh0:A
17 8joz:A 257 97 0.1111 0.1128 0.2990 0.002 4htf:A, 4htf:B
18 3dlc:A 219 103 0.1111 0.1324 0.2816 0.002
19 4krh:A 430 187 0.1686 0.1023 0.2353 0.005 4krh:B, 4kri:A, 4kri:B, 4kri:C
20 4hh4:C 256 39 0.0690 0.0703 0.4615 0.012 4hh4:A, 4hh4:B, 4hh4:D, 4hh4:E, 4hh4:F
21 7qcb:A 240 97 0.0996 0.1083 0.2680 0.013
22 7cpx:A 2262 104 0.1073 0.0124 0.2692 0.014 7cpx:B, 7cpy:A, 7cpy:B
23 5m58:A 230 137 0.1226 0.1391 0.2336 0.015 5m58:B
24 7zkh:A 266 58 0.0805 0.0789 0.3621 0.022 7zkg:A, 7zkg:B
25 2zfu:A 212 57 0.0958 0.1179 0.4386 0.027 2zfu:B
26 2xva:A 199 104 0.1226 0.1608 0.3077 0.027 2xva:B, 2xva:C, 2xva:D, 2xvm:A, 2xvm:B
27 3dtn:A 220 105 0.1034 0.1227 0.2571 0.040 3dtn:B
28 6cx6:B 333 117 0.1379 0.1081 0.3077 0.053 6cx6:A, 5eg5:A, 4fr0:A, 4fsd:A, 4kw7:A, 4rsr:A
29 4pne:B 272 105 0.1111 0.1066 0.2762 0.075 4pne:A
30 3e8s:A 220 126 0.1303 0.1545 0.2698 0.14
31 7mqa:NL 278 62 0.0690 0.0647 0.2903 0.24 7wts:3, 1zq9:A, 1zq9:B
32 6zxv:A 325 140 0.1341 0.1077 0.2500 0.38 6zxv:B, 6zxw:G
33 7wtt:q 235 79 0.0766 0.0851 0.2532 0.40 6g4w:q, 7wts:q, 7wtu:q, 7wtv:q, 7wtw:q
34 1l9a:A 87 44 0.0613 0.1839 0.3636 0.46 1lng:A, 3ndb:A, 2v3c:A, 2v3c:B, 4xco:A, 4xco:B
35 5w7m:A 273 114 0.1149 0.1099 0.2632 0.46
36 5w7k:A 274 114 0.1111 0.1058 0.2544 0.65 5w7k:B
37 7bgg:A 216 100 0.0996 0.1204 0.2600 0.71 7ndm:A, 7nmk:A, 7noy:A
38 7vpg:A 341 127 0.1149 0.0880 0.2362 0.87 7f60:A, 7f60:B, 7f90:A, 7f90:C, 7vpg:C, 7vpg:E, 7vpg:G, 7vph:C, 7vph:E, 7vph:G, 7vph:A
39 6ex8:A 217 45 0.0460 0.0553 0.2667 0.99 6ex8:B, 6exo:A, 6exo:B, 6exq:A, 6exq:B, 2p7u:A, 2p86:A
40 5egp:A 282 117 0.1111 0.1028 0.2479 1.2 5egp:B, 5jgk:A, 5jgk:B, 5jgl:A, 5jgl:B
41 8gxn:B 225 127 0.1418 0.1644 0.2913 1.3 8gxo:A, 8gxo:B
42 7aju:JL 283 62 0.0613 0.0565 0.2581 1.4 8cbj:y, 6rbd:y, 7wtl:JL, 7wtm:JL, 6zqd:JL, 6zqe:JL, 6zqf:JL, 6zqg:JL
43 3pjg:A 389 52 0.0690 0.0463 0.3462 1.6 3pln:A, 3plr:A
44 1aim:A 215 45 0.0536 0.0651 0.3111 1.8 2aim:A, 1ewl:A, 1ewm:A, 1ewo:A, 1ewp:A, 1f29:A, 1f29:B, 1f29:C, 1f2a:A, 1f2b:A, 1f2c:A, 3hd3:A, 3hd3:B, 3i06:A, 3iut:A, 7juj:A, 7juj:B, 7juj:C, 7juj:D, 7juj:E, 7juj:F, 3kku:A, 4klb:A, 4klb:B, 4klb:C, 3lxs:A, 3lxs:C, 1me3:A, 1me4:A, 2oz2:A, 2oz2:C, 4pi3:A, 4pi3:B, 4qh6:A, 7s18:A, 7s19:A, 1u9q:X, 6ux6:A, 4w5b:A, 4w5b:B, 4w5b:C, 4w5c:A, 4w5c:B, 4w5c:C, 4w5c:D, 4xui:A, 4xui:B, 4xui:C
45 5mgz:A 230 101 0.0881 0.1000 0.2277 1.8 5mgz:B
46 8x3w:A 270 58 0.0575 0.0556 0.2586 1.9 8x3w:B, 8x41:A, 8x41:B, 8x44:A, 8x44:B, 8x45:A, 8x45:B, 8x46:A, 8x46:B, 8x47:A, 8x4i:A, 8x4l:A, 8x4l:B, 8x4o:A, 8x4o:B, 8x4p:A, 8x4p:B
47 6p4e:B 217 57 0.0690 0.0829 0.3158 2.0 6p4e:A
48 5fub:A 337 66 0.0958 0.0742 0.3788 2.3 5g02:A
49 7pkq:b 241 122 0.1456 0.1577 0.3115 2.5
50 7mqa:ST 570 30 0.0421 0.0193 0.3667 2.7 7mq8:ST, 7mq9:ST
51 5wp5:A 463 125 0.1264 0.0713 0.2640 2.8 5wp5:B
52 4nec:B 244 37 0.0575 0.0615 0.4054 3.7 4nec:A, 4nec:C, 4nec:D
53 5wmm:A 870 106 0.1226 0.0368 0.3019 3.7
54 6en3:A 934 21 0.0307 0.0086 0.3810 5.0 8a49:C, 4nuy:A, 4nuz:A
55 1ko7:A 285 37 0.0498 0.0456 0.3514 7.9 1ko7:B
56 2zwv:A 373 69 0.0690 0.0483 0.2609 7.9 3dmf:A, 3dmg:A, 3dmh:A, 2zul:A
57 1nw8:A 272 49 0.0690 0.0662 0.3673 8.8 1eg2:A, 1nw5:A, 1nw6:A, 1nw7:A
58 3njr:A 184 134 0.1188 0.1685 0.2313 9.3 3njr:B
59 1l3i:A 186 109 0.1034 0.1452 0.2477 9.8 1l3i:B, 1l3i:C, 1l3i:D, 1l3i:E, 1l3i:F

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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