BioLiP

>protein
SRTNENDPAKHGDQHEGQHYNISPQDLETVFPHGLPPRFVMQVKTFSEACLMVRKPALELLHYLKNTSFAYPAIRYLLYG
EKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYNKQRFDQPLEASTWLKNFKTTNERFLNQIKVQEKY
VWNKRESTEKGSPLGEVVEQGITRVRNATDAVGIVLKELKRQSSLGMFHLLVAVDGINALWGRTTLKREDKSPIAPEELA
LVHNLRKMMKNDWHGGAIVSALSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPKEFESCIQYYLENNWLQH
EKAPTEEGKKELLFLSNANPSLLERHCAYL

The query sequence (length=350) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	7l08:AX	353	350	1.0000	0.9915	1.0000	0.0	8any:AX, 8csp:X, 8csq:X, 8csr:X, 8css:X, 8cst:X, 8csu:X, 8k2a:Se, 7og4:AX, 8oir:AX, 8ois:AX, 7p2e:X, 7pnx:X, 7pny:X, 7pnz:X, 7po0:X, 7po1:X, 7po2:X, 7po3:X, 7qi4:AX, 7qi5:AX, 7qi6:AX, 8qrk:X, 8qrl:X, 8qrm:X, 8qrn:X, 6rw4:X, 6rw5:X, 6vlz:AX, 6vmi:AX, 8xt0:Se, 8xt2:Se, 6zm5:AX, 6zm6:AX, 6zs9:AX, 6zsa:AX, 6zsb:AX, 6zsc:AX, 6zsd:AX, 6zse:AX, 6zsg:AX
2	6gaw:Ag	353	350	0.8943	0.8867	0.8943	0.0	5aj3:g, 5aj4:Ag, 6gaz:Ag, 3jd5:g, 6neq:g, 6nf8:g, 7nqh:Ag, 7nql:Ag, 7nsi:Ag, 7nsj:Ag, 8oin:AX, 8oip:AX, 6ydp:Ag, 6ydw:Ag
3	7a5f:X6	316	348	0.9029	1.0000	0.9080	0.0	7a5g:X6, 7a5i:X6, 7a5k:X6, 3j9m:AX, 6nu2:AX, 6nu3:AX
4	7pnt:X	357	350	0.8429	0.8263	0.8429	0.0	7pnu:X, 7pnv:X, 7pnw:X
5	6xyw:Bw	337	337	0.2229	0.2315	0.2315	1.58e-12
6	8a22:Bw	349	222	0.1600	0.1605	0.2523	5.58e-09	8apn:Bw, 8apo:Bw
7	6yw5:XX	408	252	0.1543	0.1324	0.2143	7.70e-08	6ywe:XX, 6ywx:XX, 6ywy:XX
8	7pua:Cg	487	154	0.1229	0.0883	0.2792	2.14e-06	6hiv:Cg, 6hiw:Cg, 6hiz:Cg, 7pub:Cg, 6sg9:Cg, 6sgb:Cg
9	6z1p:Bw	662	80	0.0714	0.0378	0.3125	1.70e-05
10	7aor:r	465	156	0.1171	0.0882	0.2628	4.39e-04
11	7pkq:x	368	82	0.0571	0.0543	0.2439	0.006
12	6vzd:E	85	67	0.0686	0.2824	0.3582	0.27	6vyn:A, 6vyn:E, 6vyn:C, 6vyn:B, 6vyn:D, 6vyn:F, 6vyn:G, 6vyn:H, 6vzd:A, 6vzd:C, 6vzd:B
13	8om2:W	402	116	0.0743	0.0647	0.2241	0.28	8d8k:W, 8d8l:W, 5mrc:WW, 5mre:WW, 5mrf:WW, 8om3:W, 8om4:W
14	4o1w:A	79	59	0.0514	0.2278	0.3051	0.47	4o1w:D, 4o1w:B, 4o1w:C, 4o1w:E, 4o1w:F
15	5ngl:B	454	73	0.0657	0.0507	0.3151	0.77	5ngl:A, 5ngl:C
16	6ky3:A	353	137	0.0943	0.0935	0.2409	0.88
17	5gup:i	347	36	0.0400	0.0403	0.3889	1.7	7v2c:i, 7v2d:i, 7v2e:i, 7v2f:i, 7v2h:i, 7v2k:i, 7v2r:i, 7v30:i, 7v31:i, 7v32:i, 7v33:i, 7v3m:i, 7vbl:i, 7vbp:i, 7vc0:i, 7vwl:i, 7vxs:i, 7vy1:i, 7vy9:i, 7vye:i, 7vyg:i, 7vyi:i, 7vys:i, 7vz8:i, 7vzv:i, 7vzw:i, 7w00:i, 7w0h:i, 7w0r:i, 7w0y:i, 7w1o:i, 7w1p:i, 7w1t:i, 7w1u:i, 7w1v:i, 7w1z:i, 7w20:i, 7w2k:i, 7w2r:i, 7w2u:i, 7w2y:i, 7w31:i, 7w32:i, 7w35:i, 7w4c:i, 7w4d:i, 7w4e:i, 7w4f:i, 7w4g:i, 7w4j:i, 7w4k:i, 7w4l:i, 7w4m:i, 7w4n:i, 7w4q:i
18	5xtc:i	347	23	0.0286	0.0288	0.4348	6.7	5xtd:i, 5xth:i, 5xti:i, 5xti:Bi
19	8flj:M	970	80	0.0571	0.0206	0.2500	7.0	8flj:N
20	7jgr:E	398	65	0.0600	0.0528	0.3231	7.2	7jgs:E, 7jk2:E, 7jk3:E, 7jk4:E, 7jk5:E, 7jk6:E
21	8a3x:A	295	78	0.0657	0.0780	0.2949	8.0	8a3x:B, 8a3x:C, 8a3x:D, 8a5z:A, 8a5z:B
22	7fh4:A	140	38	0.0400	0.1000	0.3684	8.1	7fh4:B, 7fh9:A
23	6pdw:D	299	132	0.0800	0.0936	0.2121	9.3	6pdw:B, 6pdw:C, 6pdw:E, 6pdw:F, 6pdy:F, 6pdy:C, 6pdy:D, 6pdy:E, 6pdy:B, 6pe0:B, 6pe0:C, 6pe0:D, 6pe0:E, 6pe0:F

[Back]