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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
SRQAEVNIGMVGHVDHGKTTLTKALTGVWTDSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSF
IDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIE
GTVAENAPIIPISALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGEKLVGGVLGGSIVQGKLKVGDEIE
IRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVH
LLERVVEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIKE

The query sequence (length=398) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2dcu:A 407 405 0.9598 0.9386 0.9432 0.0 2d74:A, 1kjz:A, 1kk0:A, 1kk1:A, 1kk2:A, 1kk3:A
2 1s0u:A 391 400 0.6533 0.6650 0.6500 0.0
3 3qsy:A 415 408 0.5779 0.5542 0.5637 2.34e-159 2aho:A, 3cw2:B, 6i5m:A, 5jb3:7, 5jbh:7, 4m0l:A, 4m0l:B, 4m0l:C, 4m0l:D, 4m0l:E, 4m0l:F, 4m2l:A, 4m4s:A, 4nbs:A, 3pen:A, 2pmd:A, 2pmd:B, 4qfm:A, 4qhy:A, 2qmu:A, 2qn6:A, 6r8s:A, 6r8t:A, 4rcy:A, 4rcz:A, 4rd0:A, 4rd1:A, 4rd2:A, 4rd3:A, 4rd4:A, 4rd6:A, 4rjl:A, 3sjz:A, 6sw9:7, 6swc:7, 3v11:A
4 8rw1:k 470 424 0.4874 0.4128 0.4575 5.51e-122 6fyx:k, 6gsm:k, 6gsn:k, 6qg0:M, 6qg0:N, 6qg1:M, 6qg1:N, 6qg2:M, 6qg3:M, 6qg5:M, 6qg6:M, 6qg6:N, 8s8d:k, 8s8e:k, 8s8g:k, 8s8h:k, 8s8i:k, 8s8j:k
5 8pj1:t 472 428 0.5025 0.4237 0.4673 1.58e-121 7d43:P, 6fec:S, 5k0y:S, 6k71:P, 6k72:P, 8oz0:E, 8pj2:t, 8ppl:It, 6yal:B, 6yam:B, 6yan:B
6 8cas:G 396 405 0.4749 0.4773 0.4667 1.21e-120 6fyy:k, 6i3m:O, 6i3m:P, 6i7t:O, 6i7t:P, 3jap:k, 8s8f:k
7 8qzz:A 433 419 0.4824 0.4434 0.4582 1.51e-112 7a09:Y, 6zp4:Y
8 7qp6:t 356 399 0.4472 0.5000 0.4461 4.41e-107 7qp7:t, 6ybv:t, 6zmw:t
9 7ase:5 421 421 0.4397 0.4157 0.4157 2.98e-103
10 3j81:k 365 400 0.4271 0.4658 0.4250 6.59e-102
11 8v9l:x 387 421 0.3141 0.3230 0.2969 1.92e-32 7vok:A, 7vok:B, 7vok:C, 7vok:D
12 6gfu:A 386 416 0.3166 0.3264 0.3029 1.07e-31 5w76:A, 5w7q:A
13 5w75:C 387 414 0.3040 0.3127 0.2923 1.40e-31 5w75:B, 5w75:D, 5w75:A
14 1b23:P 405 342 0.2613 0.2568 0.3041 2.05e-30 2c77:A, 2c78:A, 1eft:A, 1exm:A, 4h9g:A, 1ha3:A, 4lbv:A, 4lbw:A, 4lby:A, 4lbz:A, 4lc0:A, 1mj1:A, 1ob5:A, 1ob5:C, 1ob5:E, 2p8w:S, 2p8x:S, 2p8z:S, 1ttt:A, 1ttt:B, 1ttt:C, 1tui:A, 1tui:B, 1tui:C, 4v5l:AZ, 4v8q:BZ
15 4v5p:AZ 385 329 0.2588 0.2675 0.3131 1.46e-29 1ha3:B, 4v5g:AZ, 4v5g:CZ, 4v5p:CZ, 4v5q:AZ, 4v5q:CZ, 4v5r:AZ, 4v5r:CZ, 4v5s:AZ, 4v5s:CZ, 4v68:AZ
16 1d2e:A 397 334 0.2588 0.2594 0.3084 4.33e-29 7a5g:Z, 1d2e:B, 1d2e:C, 1d2e:D, 7o9k:t
17 7paj:9 393 346 0.2462 0.2494 0.2832 1.52e-28 7pak:9, 7pha:9, 7pi9:9, 7pip:9
18 5lzb:z 614 396 0.2789 0.1808 0.2803 2.41e-28 5lzc:z, 5lzd:z, 2pjp:A
19 6htw:B 385 331 0.2588 0.2675 0.3112 4.42e-28 6htw:H, 6i8r:A
20 4zv4:A 392 351 0.2613 0.2653 0.2963 8.56e-28 4zv4:B
21 7vmx:B 359 318 0.2387 0.2646 0.2987 5.90e-26
22 6mij:A 388 432 0.3090 0.3170 0.2847 7.47e-25
23 4zu9:A 582 379 0.2739 0.1873 0.2876 1.16e-24
24 5izm:B 495 303 0.2211 0.1778 0.2904 3.91e-24 5izk:A, 5izm:A
25 3wy9:A 416 360 0.2538 0.2428 0.2806 6.41e-24 3wy9:B, 3wya:A
26 1ob2:A 393 346 0.2563 0.2595 0.2948 4.49e-23 1d8t:A, 1d8t:B, 1dg1:G, 1dg1:H, 1efc:A, 1efc:B, 6eze:A, 6eze:B, 8fr3:A, 8fr3:B, 2fx3:A, 4g5g:A, 8g7p:z, 8g7q:z, 5jbq:A, 5mi3:A, 5mi3:B, 5mi8:A, 5mi8:B, 5mi9:A, 5mi9:B, 4p3y:A, 8qfs:C, 8qhc:C, 3u2q:A, 3u6k:A, 3u6k:B, 5uyk:Z, 5uyl:Z, 5uym:Z, 5uyn:Z, 5uyp:Z, 5uyq:Z, 4v69:AZ, 4v6k:BC, 4v6l:AC, 5wdt:z, 6wd2:8, 6wd3:8, 6wd5:8, 6wd6:8, 6wd8:8, 5we4:z, 5we6:z, 5wf0:z, 5wfk:z, 5wfs:z
27 4ac9:C 471 423 0.2889 0.2442 0.2719 4.56e-23 4ac9:A, 4ac9:B, 4aca:B, 4aca:C, 4acb:A, 4acb:B, 4acb:C
28 4iw3:B 380 348 0.2638 0.2763 0.3017 4.87e-23 4iw3:K, 4j0q:A, 4j0q:B, 4j0q:C, 4j0q:D, 4j0q:E
29 6ji2:A 432 372 0.2387 0.2199 0.2554 1.48e-20 4cxg:A, 4cxh:A, 6ji2:E, 3vmf:A, 3wxm:A, 3wxm:C, 3wxm:E, 3wxm:G
30 3avt:A 1203 331 0.2437 0.0806 0.2931 1.54e-20 7abz:6, 5afi:z, 3agp:A, 3agq:A, 3avu:A, 3avv:A, 3avw:A, 3avx:A, 3avy:A, 7bbn:A, 7bbn:B, 2bvn:A, 2bvn:B, 1efm:A, 1etu:A, 4fwt:A, 2hcj:A, 2hcj:B, 2hdn:A, 2hdn:B, 2hdn:C, 2hdn:D, 2hdn:E, 2hdn:F, 2hdn:G, 2hdn:H, 2hdn:I, 2hdn:J, 2hdn:K, 2hdn:L, 5i4r:C, 5i4r:D, 5i4r:G, 5i4r:H, 3mmp:G, 5opd:A, 5opd:B, 4pc2:A, 4pc2:B, 4pc3:A, 4pc3:B, 4pc6:A, 4pc6:B, 4pc7:A, 3u6b:B, 3u6b:A, 3vnu:A, 3vnv:A, 6wd4:8, 6wd7:8, 6wd9:8, 6wda:8
31 7zjw:E 519 313 0.2161 0.1657 0.2748 2.17e-20 5izl:A, 5izl:B
32 8rdw:H 386 351 0.2487 0.2565 0.2821 2.67e-19 8rd8:H
33 1skq:A 416 341 0.2261 0.2163 0.2639 1.44e-18 1jny:A, 1jny:B, 1skq:B
34 6ra9:B 458 358 0.2236 0.1943 0.2486 6.86e-16 8b6z:A, 4c0s:A, 4c0s:B, 8g5z:EF, 8g60:EF, 8g6j:EF, 5lzs:jj, 6ra9:A, 6zmo:CD
35 5lmv:a 502 285 0.2312 0.1833 0.3228 5.21e-15
36 5o8w:A 449 356 0.2312 0.2049 0.2584 6.62e-15 2b7b:A, 9bdp:EF1A, 1g7c:A, 1ije:A, 1ijf:A
37 5izk:B 451 300 0.1884 0.1663 0.2500 1.63e-13
38 4kjz:C 458 285 0.2186 0.1900 0.3053 2.70e-11 4b43:A, 4b44:A, 4b47:A, 4b48:A, 4kjz:A
39 5lzt:jj 428 234 0.1558 0.1449 0.2650 5.01e-11 4d61:i, 5hxb:X, 5hxb:A, 7nwh:jj, 6xk9:X, 6xk9:A
40 5lzw:jj 425 293 0.1734 0.1624 0.2355 9.98e-11 5lzx:jj, 5lzy:jj, 5lzz:jj
41 6gaw:BC 571 283 0.1859 0.1296 0.2615 4.41e-10 6gaz:BC, 6gb2:BC, 7po2:7, 8qrn:7, 6rw5:7
42 3p27:B 444 270 0.1759 0.1577 0.2593 4.43e-10 3p27:A
43 7unv:x 593 208 0.1533 0.1029 0.2933 9.63e-10 7unq:x, 7unr:x, 7unt:x, 7unu:x, 7unw:x
44 1g7s:A 576 137 0.1181 0.0816 0.3431 1.15e-09 1g7t:A
45 1zun:B 394 240 0.1608 0.1624 0.2667 1.21e-09
46 5imr:C 570 251 0.1759 0.1228 0.2789 5.40e-09
47 5j8b:z 671 251 0.1759 0.1043 0.2789 5.46e-09 5imq:B
48 2ywf:A 532 271 0.1985 0.1485 0.2915 7.13e-09 2ywg:A, 2ywh:A
49 7yyp:A 597 136 0.1156 0.0771 0.3382 9.07e-09 7yzn:A, 7zag:7, 7zah:7, 7zki:7
50 2lkd:A 178 137 0.1106 0.2472 0.3212 2.30e-08
51 3j9y:w 639 158 0.1206 0.0751 0.3038 3.35e-08 5kcs:1w
52 5a9y:A 562 251 0.1709 0.1210 0.2709 4.48e-08 5a9x:A
53 5m1j:A6 539 187 0.1307 0.0965 0.2781 4.78e-08
54 4v6v:A1 639 153 0.1080 0.0673 0.2810 3.16e-07
55 5aa0:BZ 605 254 0.1709 0.1124 0.2677 3.26e-07 5a9z:CA, 4zck:A, 4zcl:A, 4zcl:B, 4zcm:A, 4zcm:B
56 7pua:IA 704 258 0.1734 0.0980 0.2674 7.66e-07 7pub:IA
57 3izy:P 537 283 0.1809 0.1341 0.2544 1.16e-06
58 4w2e:y 644 237 0.1508 0.0932 0.2532 3.16e-06
59 5fg3:A 598 136 0.1106 0.0736 0.3235 1.41e-05 5yt0:A
60 6u45:A 726 81 0.0779 0.0427 0.3827 2.07e-05 6u43:A, 6u44:A, 6u44:B, 6u45:B
61 8y0w:CB 768 109 0.0729 0.0378 0.2661 3.54e-05 8y0x:CB
62 8q87:A 857 109 0.0729 0.0338 0.2661 3.83e-05 6d9j:9, 6gz3:Ct, 6gz4:Ct, 6gz5:Ct, 3j7p:4, 7ls1:m, 7ls2:m, 6mtd:v, 6mte:v, 7oyc:v2, 4v6x:Az, 8xsx:CB, 6z6m:CB, 6z6n:CB
63 3jce:x 586 243 0.1533 0.1041 0.2510 5.59e-05 3deg:C
64 4crn:P 430 218 0.1357 0.1256 0.2477 6.71e-05
65 8hl1:AEFG 725 116 0.0879 0.0483 0.3017 8.32e-05 8hl2:AEFG, 8hl3:AEFG, 8hl4:AEFG
66 5anb:K 1120 127 0.0930 0.0330 0.2913 9.60e-05 5anc:K
67 9ax8:z 509 115 0.0854 0.0668 0.2957 2.66e-04 3jcj:f, 3jcn:b, 5me0:W, 5me1:W, 6o7k:f, 6o9k:z
68 8cf5:Aa 842 127 0.0829 0.0392 0.2598 3.17e-04 8cdr:Aa, 8ceh:Aa, 8cg8:Aa, 8civ:Aa, 8cku:Aa, 8cmj:Aa, 2e1r:A, 8eub:DC, 8evq:DC, 8evr:DC, 8evs:DC, 8ewb:DC, 6gq1:AZ, 6gqb:AZ, 6gqv:AX, 5it7:1, 5juo:DC, 5jup:DC, 5jus:DC, 5jut:DC, 5juu:DC, 8k2d:CD, 1n0u:A, 2npf:A, 2npf:B, 7osa:eEF2, 7osm:eEF2, 2p8w:T, 2p8x:T, 2p8y:T, 2p8z:T, 1u2r:A, 4v4b:AT, 1zm2:E
69 2bv3:A 632 105 0.0729 0.0459 0.2762 3.76e-04 1dar:A
70 4v9h:AY 622 108 0.0779 0.0498 0.2870 8.47e-04
71 5ty0:A 378 110 0.0729 0.0767 0.2636 8.62e-04
72 1r5o:A 409 268 0.1658 0.1614 0.2463 0.002 1r5n:A
73 7old:C 813 108 0.0729 0.0357 0.2685 0.002
74 7n2v:EF 704 106 0.0754 0.0426 0.2830 0.002 3j9z:S1, 3ja1:S3, 7k51:8, 7k52:8, 7k54:8, 7k55:8, 7n2c:EF, 7otc:w, 7pjv:x, 7pjw:x, 7pjy:x, 7pjz:x, 7ss9:8, 7ssd:8, 7ssl:8, 7st7:8, 7ug7:EF, 4v7b:AY, 4v7d:BZ, 4v9o:BV, 4v9o:DV, 4v9o:FV, 4v9o:HV, 4v9p:BV, 4v9p:DV, 4v9p:FV, 4v9p:HV
75 3iev:A 302 126 0.0955 0.1258 0.3016 0.003 7c1o:A, 3r9w:A, 3r9x:A
76 2dy1:A 660 107 0.0754 0.0455 0.2804 0.003 1wdt:A
77 2aus:D 53 24 0.0327 0.2453 0.5417 0.004 2aus:B, 2ey4:E, 2ey4:F, 3hax:C, 3hay:C, 3hjw:B, 2hvy:C, 3lwo:B, 3lwp:B, 3lwq:B, 3lwr:B, 3lwv:B, 2rfk:B
78 8ro0:C 898 106 0.0729 0.0323 0.2736 0.004 8ro1:C
79 4v6w:Az 837 179 0.1131 0.0538 0.2514 0.004
80 7syv:x 627 144 0.1106 0.0702 0.3056 0.005 8pj3:0, 8pj4:0, 8pj5:0, 7syw:x, 7syx:x, 7tql:1, 4ujc:AB, 4ujd:BB
81 2aqc:A 63 26 0.0251 0.1587 0.3846 0.009 2apo:B
82 7oyd:v 726 109 0.0603 0.0331 0.2202 0.014
83 4v8z:CV 568 142 0.1080 0.0757 0.3028 0.036
84 6vlz:v 712 123 0.0829 0.0463 0.2683 0.054 7a5k:r1, 6vmi:v, 6ydp:BC, 6ydw:BC
85 6woo:1 600 142 0.1106 0.0733 0.3099 0.055 4ncf:A, 4ncf:B, 3wbk:A
86 5h7l:A 694 169 0.0980 0.0562 0.2308 0.059 5h7k:A, 5h7l:B
87 7pjx:x 522 104 0.0653 0.0498 0.2500 0.060
88 8ro2:C 908 105 0.0628 0.0275 0.2381 0.073 7aav:r, 7abf:r, 7abg:r, 7abi:r, 6ah0:C, 6ahd:C, 8c6j:C, 8ch6:b, 7dvq:C, 6ff4:B, 6ff7:B, 9fmd:C, 8h6e:5C, 8h6j:5C, 8h6k:5C, 8h6l:5C, 8i0p:C, 8i0r:C, 8i0s:C, 8i0t:C, 8i0u:C, 8i0v:C, 8i0w:C, 6icz:C, 6id0:C, 6id1:C, 8q7q:C, 8q7v:C, 8q7w:C, 8q7x:C, 8q91:C, 6qdv:C, 8qp8:C, 7qtt:b, 6qw6:5C, 6qx9:5C, 8rc0:C, 7w59:C, 7w5a:C, 7w5b:C, 5xjc:C, 8y6o:D, 5yzg:C, 5z56:C, 5z57:C, 5z58:C, 6zym:B
89 1efg:A 592 105 0.0628 0.0422 0.2381 0.075 2efg:A
90 4ncl:B 435 145 0.1131 0.1034 0.3103 0.077 4ncl:A, 4ncn:A, 4ncn:B, 4tmt:A, 4tmt:B, 4tmv:B, 4tmv:A, 4tmw:A, 4tmw:B, 4tmx:A, 4tmx:B, 4tmz:B, 4tmz:A, 4tn1:B, 4tn1:A
91 3wnb:A 361 203 0.1181 0.1302 0.2315 0.083 3wnc:A
92 5hau:1z 730 106 0.0653 0.0356 0.2453 0.091 2bm0:A, 2bm1:A, 1fnm:A, 6gzq:H1, 6gzx:H1, 6gzx:H2, 6gzz:H1, 6gzz:H2, 5hau:2z, 4m1k:A, 4myt:A, 4myu:A, 2om7:L, 5ot7:U, 6q95:G, 6ucq:1v, 6ucq:2v, 4v5f:AY, 4v5f:CY, 4v5m:AY, 4v5n:AY, 4v6t:AY, 4v8u:AY, 4v8u:CY, 4v90:AY, 4v9j:AY, 4v9j:CY, 4v9k:AY, 4v9k:CY, 4v9l:AY, 4v9l:CY, 4v9m:AY, 4v9m:CY, 4w29:AY, 4w29:CY, 4wpo:BZ, 4wpo:DZ, 4wqf:BZ, 4wqf:DZ, 4wqu:BZ, 4wqu:DZ, 4wqy:BZ, 4wqy:DZ
93 8bsi:a 815 105 0.0628 0.0307 0.2381 0.13
94 6uz7:1 600 102 0.0829 0.0550 0.3235 0.17 4v8y:CP
95 4fn5:A 670 101 0.0678 0.0403 0.2673 0.22
96 7pao:9 682 115 0.0754 0.0440 0.2609 0.22 7paq:9, 7par:9, 7pib:9, 7pis:9, 7pit:9
97 7nsh:BC 700 121 0.0804 0.0457 0.2645 0.31 7l20:w
98 7oqy:Y 92 70 0.0477 0.2065 0.2714 0.32
99 8fzi:v 525 95 0.0628 0.0476 0.2632 0.85 8fzd:v, 8fzf:v, 8fzg:v, 8fzj:v, 6gwt:w, 6gxm:w, 6gxn:w, 6gxo:w, 6gxp:w, 2h5e:A, 2h5e:B, 6lkq:v, 7m5d:7, 4v85:AW, 4v89:AW, 4v8o:AY
100 6o8w:2 56 19 0.0276 0.1964 0.5789 1.5 7nhk:4, 6o8x:2, 6o8y:2, 6o8z:2, 6o90:2, 7p7q:4, 7p7r:4, 7p7s:4, 7p7t:4, 7p7u:4, 6w6p:2, 6wu9:2
101 8p2f:E 670 112 0.0779 0.0463 0.2768 1.5 8p2g:E, 8p2h:E
102 5ck3:F 147 85 0.0704 0.1905 0.3294 2.0
103 3kxi:A 326 185 0.1181 0.1442 0.2541 2.0 2qth:A
104 4wnr:A 323 172 0.1080 0.1331 0.2500 2.1
105 3lup:A 283 58 0.0452 0.0636 0.3103 2.5
106 3l7y:A 266 98 0.0628 0.0940 0.2551 3.0
107 5lj3:C 882 116 0.0678 0.0306 0.2328 3.6 6exn:C, 5gam:C, 5gan:C, 5lj5:C, 5lqw:B, 5mps:C, 5mq0:C, 5nrl:C
108 5goy:A 598 41 0.0352 0.0234 0.3415 3.7 5gl7:A
109 5y3m:A 738 57 0.0452 0.0244 0.3158 4.0 3wpe:A, 5y3m:B
110 3s9c:A 234 88 0.0553 0.0940 0.2500 4.4 3sbk:A
111 5ijl:A 943 34 0.0251 0.0106 0.2941 4.8
112 4jyb:A 323 61 0.0528 0.0650 0.3443 4.9 8dpb:A, 8dpb:B, 4jyb:B, 4jyc:D, 4lc1:A, 4lc1:B, 2qm7:A, 2qm7:B
113 8ppt:B 1191 34 0.0251 0.0084 0.2941 5.5 8ppu:B, 8ppv:B, 6t8h:B
114 1iml:A 76 41 0.0302 0.1579 0.2927 6.5
115 6knb:B 1120 24 0.0226 0.0080 0.3750 6.5 6knc:B
116 3tr5:A 518 103 0.0603 0.0463 0.2330 7.9 3tr5:B, 3tr5:C, 3tr5:D
117 7of4:C 422 20 0.0327 0.0308 0.6500 8.7 7of2:C, 7of6:C

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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