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BioLiP
>protein
SRLNRESVIDAALELLNETGIDGLTTRKLAQKLGIEQPTLYWHVKNKRALLDALAVEILARHHDYSLPAAGESWQSFLRN
NAMSFRRALLRYRDGAKVHLGTRPDEKQYDTVETQLRFMTENGFSLRDGLYAISAVSHFTLGAVLEQQEHTAALTDRPAA
PDENLPPLLREALQIMDSDDGEQAFLHGLESLIRGFEVQLTALLQIV

The query sequence (length=207) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 4aux:A 207 207 0.9952 0.9952 0.9952 5.19e-152 4abz:AAA, 4b1r:A, 4b3a:A, 4d7m:A, 4d7n:A, 2fj1:A, 3fk7:A, 3fk7:B, 5fkk:A, 5fkk:B, 5fkl:A, 5fkm:A, 5fkn:A, 5fkn:B, 5fko:A, 6fpl:A, 6fpm:A, 2o7o:A, 1ork:A, 6qjw:A, 6qjx:A, 1qpi:A, 6rbl:A, 6rbm:A, 6rcr:A, 6rgx:B, 2tct:A, 2trt:A, 4v2g:A, 4v2g:B, 2vke:A, 2vkv:A, 2x6o:A, 2x9d:A, 2xb5:A, 2xpu:A, 2xpv:A, 2xpw:A, 2xrl:A, 6yr1:AAA, 6yr2:AAA, 6yr2:BBB
2 3zqg:A 208 207 0.7053 0.7019 0.7053 2.81e-106 4ac0:A, 2ns8:A, 2ns8:B, 2ns8:C, 2ns8:D, 6sy4:A, 6sy6:A, 3zqh:A, 3zqi:A, 3zqi:B
3 3zqf:A 183 203 0.6667 0.7541 0.6798 1.76e-95 6sy4:B, 6sy6:B
4 2vpr:A 197 202 0.5797 0.6091 0.5941 4.00e-85
5 6rxb:B 200 196 0.4831 0.5000 0.5102 5.68e-62 6rxb:D, 6rxb:A, 6rxb:C
6 5mru:A 173 146 0.4106 0.4913 0.5822 4.78e-55
7 8oo2:A 177 149 0.2947 0.3446 0.4094 3.20e-30 8oo2:B
8 5yej:C 169 150 0.2174 0.2663 0.3000 2.54e-11 5yej:B, 5yej:A
9 3b6a:A 213 205 0.2705 0.2629 0.2732 3.97e-11 3b6a:B, 3b6a:C, 3b6a:D, 3b6a:E, 3b6a:F, 3b6a:G, 3b6a:H, 3b6c:A, 3b6c:B
10 5ojy:A 222 209 0.2609 0.2432 0.2584 9.73e-10
11 7ju3:B 203 77 0.1304 0.1330 0.3506 2.54e-05 8fw0:A, 8fw0:B, 8fw0:C, 8fw0:D, 8fw3:C, 8fw3:D, 8fw3:A, 8fw3:B, 8fw8:B, 8fw8:C, 8fw8:D, 7jnp:A, 7jnp:B, 7ju3:A, 8ssh:C, 8ssh:D, 8ssh:A, 8ssh:B
12 7eqf:A 184 188 0.2319 0.2609 0.2553 1.34e-04 7eqf:B, 7eqf:C, 7eqf:D
13 3p9t:A 213 54 0.0821 0.0798 0.3148 0.001
14 2y31:A 242 90 0.1111 0.0950 0.2556 0.001 2y30:A, 2y30:B, 2y31:B, 3zql:A, 3zql:B, 3zql:C, 3zql:D
15 5dy0:A 220 43 0.0773 0.0727 0.3721 0.001 5dy0:B, 5dy0:C, 5dy0:D, 5dy1:A, 5dy1:B, 6gy3:A, 6gy3:B
16 7xaq:B 201 168 0.2077 0.2139 0.2560 0.004 8hjb:A, 7xaq:D, 7xaq:H, 7xaq:A, 7xaq:G, 7xaq:C
17 3whc:A 190 47 0.0821 0.0895 0.3617 0.006 1vi0:A, 1vi0:B, 3whb:A, 3whb:B, 3whc:B, 3whc:C, 3whc:D, 3whc:E, 3whc:F
18 4i6z:B 200 47 0.0725 0.0750 0.3191 0.008 4i76:A
19 6wp9:E 218 69 0.0966 0.0917 0.2899 0.009 6wp9:A, 6wp9:B, 6wp9:C, 6wp9:D, 6wp9:F, 6wp9:G, 6wp9:H, 6wpa:A, 6wpa:B
20 6ayi:A 183 54 0.0725 0.0820 0.2778 0.009 6ayi:B, 6ayi:C, 6ayi:D
21 7k1c:B 208 70 0.1111 0.1106 0.3286 0.018 7k1a:A, 7k1a:B, 7k1c:A, 7kd8:A, 7kd8:B, 7kd8:D, 7kd8:C, 2uxh:A, 2uxh:B, 2uxi:A, 2uxi:B, 2uxo:B, 2uxp:A, 2uxp:B, 2uxu:A, 2uxu:B
22 5gpc:A 190 59 0.0870 0.0947 0.3051 0.028 5gpc:B, 5gpc:C, 5gpc:D
23 2eh3:A 171 61 0.0725 0.0877 0.2459 0.032
24 4aci:B 177 58 0.0870 0.1017 0.3103 0.042 4aci:A, 4af5:A
25 4gct:C 190 51 0.0821 0.0895 0.3333 0.044 4gct:A, 4gct:B, 4gct:D, 5haw:A, 5haw:B
26 4jl3:C 182 65 0.1159 0.1319 0.3692 0.056 4jl3:A, 4jl3:B, 4jl3:D
27 5k7z:A 185 90 0.1014 0.1135 0.2333 0.065 5k7h:A, 5k7h:B, 5k7z:B, 5k7z:C, 5k7z:D
28 4gcl:B 196 54 0.0918 0.0969 0.3519 0.083 4gck:A, 4gck:B, 4gck:C, 4gck:D, 4gcl:A, 4gcl:C, 4gcl:D, 4gcl:E, 4gcl:G, 4gcl:H, 4gcl:F, 5hbu:A, 5hbu:B, 5hbu:C, 5hbu:D, 5hbu:E, 5hbu:G, 5hbu:H, 5hbu:F, 5hsz:A, 5k58:E, 5k58:F, 5k58:A, 5k58:B
29 3tcs:B 367 61 0.0725 0.0409 0.2459 0.20 3tcs:A
30 2i10:B 182 44 0.0725 0.0824 0.3409 0.25 2i10:A
31 6yl2:B 192 57 0.0870 0.0938 0.3158 0.68 6yl2:A
32 6ayh:A 192 54 0.0676 0.0729 0.2593 0.76
33 2zgi:D 246 41 0.0870 0.0732 0.4390 0.81 2zgi:A, 2zgi:B, 2zgi:C
34 6en8:C 191 129 0.1256 0.1361 0.2016 0.84 6el2:A, 6el2:B, 6en8:D, 6en8:F, 6en8:A, 6en8:B, 6en8:E
35 3hth:B 173 56 0.0870 0.1040 0.3214 1.4 3hth:A, 3hti:A, 3htj:A, 3htj:B
36 2zue:A 628 79 0.0966 0.0318 0.2532 1.8 2zuf:A
37 7y7b:Z 153 73 0.0918 0.1242 0.2603 2.7 7y8a:Z
38 3t8q:B 369 71 0.0725 0.0407 0.2113 2.8 3t8q:A
39 3qbm:A 199 47 0.0676 0.0704 0.2979 3.0 3qbm:B
40 7r3g:B 236 40 0.0725 0.0636 0.3750 3.8 7r3g:A, 7r3h:B, 7r3h:A, 7r3i:A, 7r3i:B
41 5d1w:D 196 81 0.1159 0.1224 0.2963 4.1 5d1w:A, 5d1w:B, 5d1w:C
42 5vl9:C 191 43 0.0531 0.0576 0.2558 4.3 5vl9:B, 5vl9:A, 5vl9:D, 5vlg:A, 5vlg:B, 5vlg:C, 5vlg:D, 5vlg:E, 5vlg:F, 5vlg:G, 5vlg:H, 5vlm:A, 5vlm:B, 5vlm:C, 5vlm:D, 5vlm:E, 5vlm:F, 5vlm:G, 5vlm:H
43 1e5e:A 394 131 0.1691 0.0888 0.2672 5.6 1e5e:B, 1e5f:A, 1e5f:B
44 3e7g:C 423 50 0.0676 0.0331 0.2800 7.5 4cx7:A, 4cx7:D, 4cx7:B, 4cx7:C, 3e7g:A, 3e7g:B, 3e7g:D, 3ej8:A, 3ej8:B, 3ej8:C, 3ej8:D, 4nos:A, 4nos:B, 4nos:C, 4nos:D, 1nsi:A, 1nsi:B, 1nsi:C, 1nsi:D, 2nsi:A, 2nsi:B, 2nsi:C, 2nsi:D
45 8ckb:H004 705 143 0.1643 0.0482 0.2378 7.6 8ckb:H001, 8ckb:H006, 8ckb:H007, 8ckb:H008, 8ckb:H009, 8ckb:H010, 7qoi:FA, 7qoi:FD, 7qoi:FF, 7qoi:FG, 7qoi:FH, 7qoi:FI, 7qoi:FJ
46 8ckb:H005 660 143 0.1643 0.0515 0.2378 8.0 7qoi:FE, 7qoj:A, 7qol:A, 7qol:O
47 3aqt:B 196 52 0.0676 0.0714 0.2692 8.1 3aqt:A
48 8ckb:H003 684 143 0.1643 0.0497 0.2378 8.2 8ckb:H002, 8ckb:H011, 8ckb:H012, 7qoi:FB, 7qoi:FC, 7qoi:FK, 7qoi:FL
49 8rh3:A 156 48 0.0870 0.1154 0.3750 8.7 8pqp:A, 8pqq:A, 8pqq:C, 8pqq:B, 8pqq:D, 8pqr:B, 8pqr:D, 8pqr:A, 8pqr:C, 8qc0:A, 8qc0:B, 8qc0:C, 8qc0:D, 8rh3:B, 8rh3:C, 8rh3:D
50 2nuy:A 288 41 0.0580 0.0417 0.2927 9.0 2nuy:B
51 5fmp:A 184 50 0.0628 0.0707 0.2600 10.0 5aqc:A, 5aqc:B, 5cw8:A, 5cw8:B, 5cxi:A, 5cxi:B, 5fmp:B, 5ua1:B, 5ua1:A, 5ua2:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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