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BioLiP
>protein
SREEIFSKVKSIISEKLGVDESQVTEEAKLIDDLGADSLDLVDLVMDFESEFGVKVDDADLEKISTVGDIVSYIEKKL

The query sequence (length=78) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6lvu:A 78 78 1.0000 1.0000 1.0000 4.12e-47 6lvu:B
2 2eht:A 77 71 0.5000 0.5065 0.5493 5.44e-25
3 8jfh:E 79 71 0.4615 0.4557 0.5070 1.99e-21 8jfn:B
4 2x2b:A 76 72 0.4872 0.5000 0.5278 3.73e-19
5 2qnw:A 80 72 0.4487 0.4375 0.4861 7.56e-19
6 2fac:A 77 67 0.4359 0.4416 0.5075 6.70e-17 2fac:B, 2fad:A, 2fad:B, 2fae:A, 4keh:C, 4keh:D, 1l0i:A, 6n3p:I, 6n3p:L, 6n3p:J, 3ny7:B, 7nyw:G, 7nyx:G, 7nyy:G, 7nyz:G, 7nz0:G, 7nz2:G1, 7nz2:G2, 7nz2:G3, 7nz2:G4, 7nz3:G1, 7nz3:G2, 7nz4:G1, 7nz4:G2, 1t8k:A, 5usr:K, 5vcb:f, 5vcb:e, 5vcb:d, 5vcb:F, 5vcb:D, 5vcb:X, 6w1d:C, 6w98:B
7 3gzl:A 81 76 0.4487 0.4321 0.4605 2.85e-16 2fq0:A, 2fq2:A, 3gzm:B
8 6sga:Fc 84 77 0.3333 0.3095 0.3377 9.03e-12 6sgb:Fc, 6yxy:EK
9 8ba0:U 85 59 0.3205 0.2941 0.4237 4.48e-11 8ba0:T, 8esz:AC
10 8e73:AB 85 73 0.3462 0.3176 0.3699 6.08e-11
11 7zmb:Q 85 76 0.3462 0.3176 0.3553 6.85e-11 7zm7:O, 7zmb:O, 7zme:Q, 7zmg:O, 7zmg:Q
12 8bee:U 87 73 0.3590 0.3218 0.3836 2.61e-10 7aqr:U, 7arb:U, 8bpx:U, 8bq5:U, 8bq6:U
13 7ar7:T 84 74 0.3462 0.3214 0.3649 3.98e-10 7ar8:T, 8bq6:T
14 7b0n:U 88 58 0.3077 0.2727 0.4138 1.39e-09 6rfq:Q, 6rfr:Q, 6y79:Q
15 8iuf:AB 88 73 0.3590 0.3182 0.3836 1.69e-09 8j9h:AB, 8j9i:AB, 8j9j:AB
16 2fva:A 82 75 0.3718 0.3537 0.3867 5.28e-09
17 2koo:A 81 74 0.3462 0.3333 0.3649 7.97e-09 2kop:A, 2koq:A, 2kor:A, 2kos:A
18 7arc:U 84 74 0.3462 0.3214 0.3649 3.34e-08 7ard:U
19 7ak6:U 88 59 0.2949 0.2614 0.3898 4.66e-08 7a5h:w, 7ak6:T, 8c2s:T, 8c2s:U, 8ca3:T, 8ca5:T, 8ca5:U, 6g2j:U, 6g72:U, 5gup:O, 5gup:X, 5lnk:j, 5lnk:X, 6odd:A, 7oi6:w, 7oi8:w, 7oie:w, 8olt:T, 8om1:U, 5ool:w, 5oom:w, 8pw7:T1, 8q0a:T, 8q0a:U, 8q0f:U, 8q0o:U, 8q1p:T, 8q1u:T, 8q1y:U, 8q25:T, 8q45:T, 8q46:T, 8q46:U, 8q47:T, 8q47:U, 8q49:U, 6q9b:AB, 6q9d:AA, 6qa9:AA, 6qa9:AB, 6qbx:AA, 6qbx:AB, 6qc5:AA, 6qc6:AA, 6qc7:AA, 6qc8:AB, 7qsd:T, 7qsl:T, 7qsn:T, 8qu5:w, 7r41:T, 7r43:T, 7r44:T, 7r45:T, 7r46:T, 7r47:T, 7r47:U, 7r48:T, 7r4c:T, 7r4d:T, 7r4f:U, 7r4g:T, 8rgt:T, 8ud1:1U, 8ueo:1T, 8ueo:1U, 8uep:1U, 8ueq:1T, 8ueq:1U, 8uer:1T, 8uer:1U, 8ues:1T, 8ues:1U, 8uet:1T, 8ueu:1T, 8ueu:1U, 8uev:1T, 8uew:1T, 8uew:1U, 8uex:1T, 8uex:1U, 8uey:1T, 8uey:1U, 8uez:1T, 8uez:1U, 8ugh:1U, 8ugi:1U, 8ugj:1U, 8ugn:1T, 8ugn:1U, 8ugn:5U, 8ugr:1U, 8ugr:5T, 8ugr:5U, 7v2d:X, 7v2f:X, 7v2k:X, 7v30:X, 7v32:X, 7v33:G, 7v3m:X, 7vbl:X, 7vbp:X, 7vwj:G, 7vwl:X, 7vy1:X, 7vye:X, 7vyi:X, 7vzv:X, 7w00:X, 7w0h:X, 7w1o:X, 7w1p:X, 7w20:X, 7w2k:X, 7w2l:X, 7w31:G, 7w32:X, 7w35:X, 7w4c:X, 7w4g:X, 7w4j:X, 7w4k:X, 7w4l:X, 7w4n:X, 7zdh:X, 7zdm:j, 7zdm:X, 7zdp:X, 7zdp:j, 6zka:X, 6zkb:X, 6zkc:X, 6zkd:j, 6zke:X, 6zkf:X, 6zkg:X, 6zkh:X, 6zkh:j, 6zki:X, 6zkj:X, 6zkk:X, 6zkl:X, 6zkm:X, 6zkm:j, 6zkn:X, 6zkn:j, 6zko:X, 6zkp:X, 6zkp:j, 6zkr:X, 6zks:X, 6zkt:X, 6zku:X, 6zr2:T, 6zr2:U, 6ztq:U
20 2ll8:A 101 51 0.2564 0.1980 0.3922 7.87e-08
21 8iuf:AC 92 73 0.3205 0.2717 0.3425 1.68e-07 8j9h:AC, 8j9i:AC, 8j9j:AC
22 7b0n:T 81 55 0.2564 0.2469 0.3636 0.013 6gcs:O, 7o6y:O, 6rfq:O, 6rfr:O, 6rfs:O, 6y79:O
23 2lml:A 87 55 0.2179 0.1954 0.3091 0.016
24 3s1u:C 223 51 0.1410 0.0493 0.2157 0.43 3s1u:A, 3s1u:B, 3s1u:D, 3s1u:E, 3s1v:A, 3s1v:B, 3s1v:C, 3s1v:D, 3s1v:E, 3s1x:A, 3s1x:B, 3s1x:C, 3s1x:D, 3s1x:E, 4xz9:B, 4xz9:C, 6yr3:A, 6yr3:B, 6yr3:C, 6yr3:D, 6yr3:E, 6yrh:A, 6yrh:B, 6yrh:C, 6yrh:D, 6yrh:E, 6yrm:A, 6yrm:B, 6yrm:C, 6yrm:D, 6yrm:E, 6yrt:A, 6yrt:B, 6yrt:C, 6yrt:D, 6yrt:E, 6ys0:A, 6ys0:B, 6ys0:C, 6ys0:D, 6ys0:E
25 4nqg:A 197 32 0.1410 0.0558 0.3438 0.78 4nqg:B
26 6c94:A 482 23 0.1282 0.0207 0.4348 0.79 6c93:A, 5t6q:A
27 1pdz:A 433 41 0.1410 0.0254 0.2683 1.2 8uel:A, 8uel:B
28 2lki:A 83 75 0.2436 0.2289 0.2533 1.5
29 5cy1:A 183 42 0.2179 0.0929 0.4048 1.7 5cy1:B, 5cy2:A, 5cy2:B, 5cy2:E, 5cy2:F
30 2k0x:A 86 48 0.1795 0.1628 0.2917 1.9 2kg6:A, 2kg8:A, 2kg9:A, 2kga:A, 2kgc:A, 2kgd:A, 2kge:A, 2mvu:A, 2mvv:A
31 7pmk:Q 766 38 0.1923 0.0196 0.3947 3.0 7pmn:Q
32 3b6n:A 150 35 0.1923 0.1000 0.4286 3.3
33 8ryi:E 361 43 0.1923 0.0416 0.3488 3.3 8ryi:B, 8snf:D, 8snf:F, 8snk:I, 8snk:A, 8sp2:G, 8sp2:H, 8sp2:I, 8sp2:J, 8x3g:A, 8x3g:B
34 7vrd:A 439 65 0.2051 0.0364 0.2462 4.9 7vrd:B, 7vrd:C, 7vrd:D
35 7en2:B 1410 42 0.1538 0.0085 0.2857 6.3 7emy:A, 7emy:B, 7en1:A, 7en1:B, 7en2:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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